RNA–Protein interactions for RNA: ENST00000463285.5

CTPS1-203, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 739 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-203ENST00000463285 NALCNQ8IZF0 1738 aa13.45□□□□□ -0.26
CTPS1-203ENST00000463285 C1orf167Q5SNV9 1468 aa13.42□□□□□ -0.26
CTPS1-203ENST00000463285 USP21Q9UK80 565 aa13.42□□□□□ -0.26
CTPS1-203ENST00000463285 ATAD2Q6PL18 1390 aa13.42□□□□□ -0.26
CTPS1-203ENST00000463285 NEXMIFQ5QGS0 1516 aa13.41□□□□□ -0.26
CTPS1-203ENST00000463285 CLTCL1P53675 1640 aa13.4□□□□□ -0.26
CTPS1-203ENST00000463285 ORAI2Q96SN7 254 aa13.4□□□□□ -0.26
CTPS1-203ENST00000463285 TRPC5Q9UL62 973 aaPredicted RBP13.39□□□□□ -0.27
CTPS1-203ENST00000463285 SOS2Q07890 1332 aaPredicted RBP13.39□□□□□ -0.27
CTPS1-203ENST00000463285 ROBO2Q9HCK4 1378 aa13.38□□□□□ -0.27
CTPS1-203ENST00000463285 PTCH1Q13635 1447 aa13.38□□□□□ -0.27
CTPS1-203ENST00000463285 LAMC1P11047 1609 aa13.37□□□□□ -0.27
CTPS1-203ENST00000463285 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
CTPS1-203ENST00000463285 PPARGC1BQ86YN6 1023 aaKnown RBP13.36□□□□□ -0.27
CTPS1-203ENST00000463285 ZNF219Q9P2Y4 722 aaPredicted RBP13.36□□□□□ -0.27
CTPS1-203ENST00000463285 ZRANB1Q9UGI0 708 aa13.36□□□□□ -0.27
CTPS1-203ENST00000463285 KIF1BO60333 1816 aa13.36□□□□□ -0.27
CTPS1-203ENST00000463285 FNBP4Q8N3X1 1017 aaPredicted RBP13.35□□□□□ -0.27
CTPS1-203ENST00000463285 ATRNO75882 1429 aa13.35□□□□□ -0.27
CTPS1-203ENST00000463285 VGFO15240 615 aaPredicted RBP13.34□□□□□ -0.27
CTPS1-203ENST00000463285 COL22A1Q8NFW1 1626 aaPredicted RBP13.33□□□□□ -0.28
CTPS1-203ENST00000463285 ESCO1Q5FWF5 840 aa13.33□□□□□ -0.28
CTPS1-203ENST00000463285 XPCQ01831 940 aaPredicted RBP13.32□□□□□ -0.28
CTPS1-203ENST00000463285 HFM1A2PYH4 1435 aa13.31□□□□□ -0.28
CTPS1-203ENST00000463285 MYOM2P54296 1465 aa13.31□□□□□ -0.28
CTPS1-203ENST00000463285 NPHP3Q7Z494 1330 aa13.31□□□□□ -0.28
CTPS1-203ENST00000463285 ABCB7O75027 752 aa13.3□□□□□ -0.28
CTPS1-203ENST00000463285 SLC4A1APQ9BWU0 796 aaKnown RBP13.3□□□□□ -0.28
CTPS1-203ENST00000463285 PRAG1Q86YV5 1406 aa13.3□□□□□ -0.28
CTPS1-203ENST00000463285 BCL9LQ86UU0 1499 aa13.29□□□□□ -0.28
CTPS1-203ENST00000463285 NUTM2FA1L443 756 aa13.29□□□□□ -0.28
CTPS1-203ENST00000463285 FOXO3O43524 673 aa13.29□□□□□ -0.28
CTPS1-203ENST00000463285 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
CTPS1-203ENST00000463285 RPGRIP1LQ68CZ1 1315 aa13.29□□□□□ -0.28
CTPS1-203ENST00000463285 PXDNQ92626 1479 aa13.29□□□□□ -0.28
CTPS1-203ENST00000463285 CDC42BPGQ6DT37 1551 aa13.28□□□□□ -0.28
CTPS1-203ENST00000463285 CCDC125Q86Z20 511 aa13.28□□□□□ -0.28
CTPS1-203ENST00000463285 GJD4Q96KN9 370 aaPredicted RBP13.28□□□□□ -0.28
CTPS1-203ENST00000463285 MARF1Q9Y4F3 1742 aaKnown RBP13.27□□□□□ -0.28
CTPS1-203ENST00000463285 PPLO60437 1756 aa13.26□□□□□ -0.29
CTPS1-203ENST00000463285 LRPPRCP42704 1394 aaKnown RBP13.26□□□□□ -0.29
CTPS1-203ENST00000463285 NAIPQ13075 1403 aa13.26□□□□□ -0.29
CTPS1-203ENST00000463285 STK26Q9P289 416 aa13.26□□□□□ -0.29
CTPS1-203ENST00000463285 SRCAPQ6ZRS2 3230 aa13.26□□□□□ -0.29
CTPS1-203ENST00000463285 WAPLQ7Z5K2 1190 aa13.24□□□□□ -0.29
CTPS1-203ENST00000463285 UNC5CLQ8IV45 518 aa13.24□□□□□ -0.29
CTPS1-203ENST00000463285 RALGAPBQ86X10 1494 aa13.23□□□□□ -0.29
CTPS1-203ENST00000463285 BLMP54132 1417 aaPredicted RBP13.23□□□□□ -0.29
CTPS1-203ENST00000463285 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.23□□□□□ -0.29
CTPS1-203ENST00000463285 GLI3P10071 1580 aa13.23□□□□□ -0.29
CTPS1-203ENST00000463285 ADGRF5Q8IZF2 1346 aa13.22□□□□□ -0.29
CTPS1-203ENST00000463285 PLEKHG5O94827 1062 aa13.22□□□□□ -0.29
CTPS1-203ENST00000463285 HAP1P54257 671 aaPredicted RBP13.22□□□□□ -0.29
CTPS1-203ENST00000463285 SF3B2Q13435 895 aaKnown RBP13.22□□□□□ -0.29
CTPS1-203ENST00000463285 DEFB132Q7Z7B7 95 aa13.22□□□□□ -0.29
CTPS1-203ENST00000463285 SLIT2O94813 1529 aa13.22□□□□□ -0.29
CTPS1-203ENST00000463285 PLEKHH1Q9ULM0 1364 aa13.21□□□□□ -0.29
CTPS1-203ENST00000463285 SPATA31A3Q5VYP0 1347 aa13.21□□□□□ -0.29
CTPS1-203ENST00000463285 RGL3Q3MIN7 710 aa13.21□□□□□ -0.29
CTPS1-203ENST00000463285 RRBP1Q9P2E9 1410 aaKnown RBP13.21□□□□□ -0.3
CTPS1-203ENST00000463285 EP400Q96L91 3159 aa13.2□□□□□ -0.3
CTPS1-203ENST00000463285 TMEM132EQ6IEE7 984 aa13.2□□□□□ -0.3
CTPS1-203ENST00000463285 KRT28Q7Z3Y7 464 aa13.2□□□□□ -0.3
CTPS1-203ENST00000463285 CCDC144AA2RUR9 1427 aa13.2□□□□□ -0.3
CTPS1-203ENST00000463285 TECPR2O15040 1411 aa13.2□□□□□ -0.3
CTPS1-203ENST00000463285 USP32Q8NFA0 1604 aa13.2□□□□□ -0.3
CTPS1-203ENST00000463285 KIF1AQ12756 1690 aa13.19□□□□□ -0.3
CTPS1-203ENST00000463285 BRWD3Q6RI45 1802 aa13.19□□□□□ -0.3
CTPS1-203ENST00000463285 SEPT12Q8IYM1 358 aa13.19□□□□□ -0.3
CTPS1-203ENST00000463285 CCDC9Q9Y3X0 531 aaKnown RBP13.19□□□□□ -0.3
CTPS1-203ENST00000463285 FMN2Q9NZ56 1722 aa13.19□□□□□ -0.3
CTPS1-203ENST00000463285 CABLES1Q8TDN4 633 aa13.18□□□□□ -0.3
CTPS1-203ENST00000463285 ABCC11Q96J66 1382 aa13.18□□□□□ -0.3
CTPS1-203ENST00000463285 KNDC1Q76NI1 1749 aa13.17□□□□□ -0.3
CTPS1-203ENST00000463285 LMOD2Q6P5Q4 547 aa13.17□□□□□ -0.3
CTPS1-203ENST00000463285 FOXD4L1Q9NU39 408 aa13.17□□□□□ -0.3
CTPS1-203ENST00000463285 TNS3Q68CZ2 1445 aa13.16□□□□□ -0.3
CTPS1-203ENST00000463285 A0A0G2JS52 829 aa13.16□□□□□ -0.3
CTPS1-203ENST00000463285 MYT1Q01538 1121 aa13.16□□□□□ -0.3
CTPS1-203ENST00000463285 VPS72Q15906 364 aa13.16□□□□□ -0.3
CTPS1-203ENST00000463285 ANKRD30BQ9BXX2 1392 aa13.16□□□□□ -0.3
CTPS1-203ENST00000463285 YTHDC2Q9H6S0 1430 aaKnown RBP13.15□□□□□ -0.3
CTPS1-203ENST00000463285 PSME1Q06323 249 aa13.15□□□□□ -0.3
CTPS1-203ENST00000463285 KRT27Q7Z3Y8 459 aa13.15□□□□□ -0.3
CTPS1-203ENST00000463285 PHF8Q9UPP1 1060 aa13.15□□□□□ -0.3
CTPS1-203ENST00000463285 PLCH1Q4KWH8 1693 aa13.15□□□□□ -0.31
CTPS1-203ENST00000463285 SPATA31E1Q6ZUB1 1445 aa13.14□□□□□ -0.31
CTPS1-203ENST00000463285 IFT172Q9UG01 1749 aa13.14□□□□□ -0.31
CTPS1-203ENST00000463285 PSDA5PKW4 1024 aaPredicted RBP13.14□□□□□ -0.31
CTPS1-203ENST00000463285 PIK3C2GO75747 1445 aa13.13□□□□□ -0.31
CTPS1-203ENST00000463285 RGPD8O14715 1765 aaPredicted RBP13.12□□□□□ -0.31
CTPS1-203ENST00000463285 BAG6P46379 1132 aa13.12□□□□□ -0.31
CTPS1-203ENST00000463285 SAFB2Q14151 953 aaKnown RBP eCLIP13.12□□□□□ -0.31
CTPS1-203ENST00000463285 NWD2Q9ULI1 1742 aa13.12□□□□□ -0.31
CTPS1-203ENST00000463285 LRP5O75197 1615 aa13.12□□□□□ -0.31
CTPS1-203ENST00000463285 ABCA3Q99758 1704 aa13.11□□□□□ -0.31
CTPS1-203ENST00000463285 SBNO1A3KN83 1393 aa13.11□□□□□ -0.31
CTPS1-203ENST00000463285 ONECUT3O60422 494 aaPredicted RBP13.11□□□□□ -0.31
CTPS1-203ENST00000463285 NRXN1Q9ULB1 1477 aa13.1□□□□□ -0.31
CTPS1-203ENST00000463285 ARHGEF10O15013 1369 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms