RNA–Protein interactions for RNA: ENST00000463197.1

CCR9-205, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 4

Gene CCR9, Length 349 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-205ENST00000463197 SRCAPQ6ZRS2 3230 aa8.53□□□□□ -1.04
CCR9-205ENST00000463197 SHPRHQ149N8 1683 aa8.53□□□□□ -1.04
CCR9-205ENST00000463197 CFAP70Q5T0N1 1121 aa8.52□□□□□ -1.05
CCR9-205ENST00000463197 FOXO3O43524 673 aa8.51□□□□□ -1.05
CCR9-205ENST00000463197 ESCO1Q5FWF5 840 aa8.51□□□□□ -1.05
CCR9-205ENST00000463197 C14orf93Q9H972 538 aaKnown RBP8.51□□□□□ -1.05
CCR9-205ENST00000463197 LRPPRCP42704 1394 aaKnown RBP8.5□□□□□ -1.05
CCR9-205ENST00000463197 ABCC11Q96J66 1382 aa8.5□□□□□ -1.05
CCR9-205ENST00000463197 PIK3C2GO75747 1445 aa8.5□□□□□ -1.05
CCR9-205ENST00000463197 FNBP4Q8N3X1 1017 aaPredicted RBP8.5□□□□□ -1.05
CCR9-205ENST00000463197 CCDC144AA2RUR9 1427 aa8.49□□□□□ -1.05
CCR9-205ENST00000463197 RGS12O14924 1447 aa8.49□□□□□ -1.05
CCR9-205ENST00000463197 TECPR2O15040 1411 aa8.49□□□□□ -1.05
CCR9-205ENST00000463197 PPLO60437 1756 aa8.49□□□□□ -1.05
CCR9-205ENST00000463197 NGLY1Q96IV0 654 aa8.49□□□□□ -1.05
CCR9-205ENST00000463197 LAMC1P11047 1609 aa8.49□□□□□ -1.05
CCR9-205ENST00000463197 PXDNQ92626 1479 aa8.49□□□□□ -1.05
CCR9-205ENST00000463197 KIF1BO60333 1816 aa8.49□□□□□ -1.05
CCR9-205ENST00000463197 RBM6P78332 1123 aaKnown RBP8.48□□□□□ -1.05
CCR9-205ENST00000463197 SIRT1Q96EB6 747 aa8.48□□□□□ -1.05
CCR9-205ENST00000463197 BCL9LQ86UU0 1499 aa8.48□□□□□ -1.05
CCR9-205ENST00000463197 ANKRD30BQ9BXX2 1392 aa8.48□□□□□ -1.05
CCR9-205ENST00000463197 RAB3GAP2Q9H2M9 1393 aa8.48□□□□□ -1.05
CCR9-205ENST00000463197 YTHDC2Q9H6S0 1430 aaKnown RBP8.47□□□□□ -1.05
CCR9-205ENST00000463197 NRXN1Q9ULB1 1477 aa8.47□□□□□ -1.05
CCR9-205ENST00000463197 USP21Q9UK80 565 aa8.47□□□□□ -1.05
CCR9-205ENST00000463197 MYOM2P54296 1465 aa8.46□□□□□ -1.05
CCR9-205ENST00000463197 EP400Q96L91 3159 aa8.46□□□□□ -1.05
CCR9-205ENST00000463197 SAFB2Q14151 953 aaKnown RBP eCLIP8.46□□□□□ -1.06
CCR9-205ENST00000463197 CABLES1Q8TDN4 633 aa8.46□□□□□ -1.06
CCR9-205ENST00000463197 CDK12Q9NYV4 1490 aaPredicted RBP8.45□□□□□ -1.06
CCR9-205ENST00000463197 KRT28Q7Z3Y7 464 aa8.45□□□□□ -1.06
CCR9-205ENST00000463197 PRAM1Q96QH2 718 aa8.45□□□□□ -1.06
CCR9-205ENST00000463197 SPATA31A3Q5VYP0 1347 aa8.45□□□□□ -1.06
CCR9-205ENST00000463197 NPHP3Q7Z494 1330 aa8.45□□□□□ -1.06
CCR9-205ENST00000463197 DHX57Q6P158 1386 aaKnown RBP8.45□□□□□ -1.06
CCR9-205ENST00000463197 ATRNO75882 1429 aa8.45□□□□□ -1.06
CCR9-205ENST00000463197 IFT172Q9UG01 1749 aa8.44□□□□□ -1.06
CCR9-205ENST00000463197 PRR36Q9H6K5 1346 aa8.44□□□□□ -1.06
CCR9-205ENST00000463197 CDC42BPGQ6DT37 1551 aa8.44□□□□□ -1.06
CCR9-205ENST00000463197 PMFBP1Q8TBY8 1022 aa8.43□□□□□ -1.06
CCR9-205ENST00000463197 HIRIP3Q9BW71 556 aaPredicted RBP8.43□□□□□ -1.06
CCR9-205ENST00000463197 TRPC5Q9UL62 973 aaPredicted RBP8.43□□□□□ -1.06
CCR9-205ENST00000463197 PHF8Q9UPP1 1060 aa8.43□□□□□ -1.06
CCR9-205ENST00000463197 TRAK1Q9UPV9 953 aa8.43□□□□□ -1.06
CCR9-205ENST00000463197 KDM2AQ9Y2K7 1162 aa8.43□□□□□ -1.06
CCR9-205ENST00000463197 COL22A1Q8NFW1 1626 aaPredicted RBP8.43□□□□□ -1.06
CCR9-205ENST00000463197 FAM83GA6ND36 823 aa8.42□□□□□ -1.06
CCR9-205ENST00000463197 PLEKHG5O94827 1062 aa8.42□□□□□ -1.06
CCR9-205ENST00000463197 DCAF11Q8TEB1 546 aa8.42□□□□□ -1.06
CCR9-205ENST00000463197 GJD4Q96KN9 370 aaPredicted RBP8.42□□□□□ -1.06
CCR9-205ENST00000463197 ADGRB1O14514 1584 aa8.42□□□□□ -1.06
CCR9-205ENST00000463197 SLIT2O94813 1529 aa8.41□□□□□ -1.06
CCR9-205ENST00000463197 UNC5CLQ8IV45 518 aa8.4□□□□□ -1.06
CCR9-205ENST00000463197 MINK1Q8N4C8 1332 aaPredicted RBP8.39□□□□□ -1.07
CCR9-205ENST00000463197 ONECUT3O60422 494 aaPredicted RBP8.39□□□□□ -1.07
CCR9-205ENST00000463197 HRCP23327 699 aa8.39□□□□□ -1.07
CCR9-205ENST00000463197 NBPF1Q3BBV0 1214 aa8.39□□□□□ -1.07
CCR9-205ENST00000463197 KNDC1Q76NI1 1749 aa8.39□□□□□ -1.07
CCR9-205ENST00000463197 FMN2Q9NZ56 1722 aa8.39□□□□□ -1.07
CCR9-205ENST00000463197 USP32Q8NFA0 1604 aa8.39□□□□□ -1.07
CCR9-205ENST00000463197 WASLO00401 505 aaPredicted RBP8.38□□□□□ -1.07
CCR9-205ENST00000463197 PSME1Q06323 249 aa8.38□□□□□ -1.07
CCR9-205ENST00000463197 POGKQ9P215 609 aa8.38□□□□□ -1.07
CCR9-205ENST00000463197 GLI3P10071 1580 aa8.38□□□□□ -1.07
CCR9-205ENST00000463197 RALGAPBQ86X10 1494 aa8.38□□□□□ -1.07
CCR9-205ENST00000463197 SBNO1A3KN83 1393 aa8.37□□□□□ -1.07
CCR9-205ENST00000463197 DLC1Q96QB1 1528 aa8.37□□□□□ -1.07
CCR9-205ENST00000463197 RGPD8O14715 1765 aaPredicted RBP8.37□□□□□ -1.07
CCR9-205ENST00000463197 TNS3Q68CZ2 1445 aa8.37□□□□□ -1.07
CCR9-205ENST00000463197 VPS72Q15906 364 aa8.36□□□□□ -1.07
CCR9-205ENST00000463197 LMOD2Q6P5Q4 547 aa8.36□□□□□ -1.07
CCR9-205ENST00000463197 DEFB132Q7Z7B7 95 aa8.36□□□□□ -1.07
CCR9-205ENST00000463197 SEPT12Q8IYM1 358 aa8.36□□□□□ -1.07
CCR9-205ENST00000463197 ATAD2Q6PL18 1390 aa8.35□□□□□ -1.07
CCR9-205ENST00000463197 ACIN1Q9UKV3 1341 aaKnown RBP8.35□□□□□ -1.07
CCR9-205ENST00000463197 CDK19Q9BWU1 502 aa8.35□□□□□ -1.07
CCR9-205ENST00000463197 FAM182BQ5T319 152 aa8.34□□□□□ -1.07
CCR9-205ENST00000463197 NUDT16Q96DE0 195 aaKnown RBP8.34□□□□□ -1.07
CCR9-205ENST00000463197 BTG4Q9NY30 223 aa8.34□□□□□ -1.07
CCR9-205ENST00000463197 ANKARQ7Z5J8 1434 aa8.34□□□□□ -1.07
CCR9-205ENST00000463197 NUTM2GQ5VZR2 741 aa8.33□□□□□ -1.08
CCR9-205ENST00000463197 SIN3AQ96ST3 1273 aa8.33□□□□□ -1.08
CCR9-205ENST00000463197 TRPM3Q9HCF6 1732 aaPredicted RBP8.32□□□□□ -1.08
CCR9-205ENST00000463197 ADGRB2O60241 1585 aa8.32□□□□□ -1.08
CCR9-205ENST00000463197 FAM98CQ17RN3 349 aaKnown RBP8.32□□□□□ -1.08
CCR9-205ENST00000463197 NBPF8Q3BBV2 869 aa8.32□□□□□ -1.08
CCR9-205ENST00000463197 STAC3Q96MF2 364 aa8.32□□□□□ -1.08
CCR9-205ENST00000463197 KIF1AQ12756 1690 aa8.32□□□□□ -1.08
CCR9-205ENST00000463197 MARF1Q9Y4F3 1742 aaKnown RBP8.32□□□□□ -1.08
CCR9-205ENST00000463197 TULP4Q9NRJ4 1543 aa8.31□□□□□ -1.08
CCR9-205ENST00000463197 PLEKHG3A1L390 1219 aa8.31□□□□□ -1.08
CCR9-205ENST00000463197 CHRNA2Q15822 529 aa8.31□□□□□ -1.08
CCR9-205ENST00000463197 CCDC125Q86Z20 511 aa8.31□□□□□ -1.08
CCR9-205ENST00000463197 NGDNQ8NEJ9 315 aaKnown RBP8.31□□□□□ -1.08
CCR9-205ENST00000463197 ARHGEF10O15013 1369 aa8.31□□□□□ -1.08
CCR9-205ENST00000463197 ATP7BP35670 1465 aa8.31□□□□□ -1.08
CCR9-205ENST00000463197 ACEP12821 1306 aa8.3□□□□□ -1.08
CCR9-205ENST00000463197 PAK3O75914 559 aaPredicted RBP8.3□□□□□ -1.08
CCR9-205ENST00000463197 HAP1P54257 671 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms