RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 LCE2AQ5TA79 106 aaPredicted RBP10.43□□□□□ -0.74
USH2A-203ENST00000463147 WFS1O76024 890 aa10.42□□□□□ -0.74
USH2A-203ENST00000463147 MMP16P51512 607 aa10.42□□□□□ -0.74
USH2A-203ENST00000463147 PRDM9Q9NQV7 894 aa10.42□□□□□ -0.74
USH2A-203ENST00000463147 TRIM32Q13049 653 aa10.41□□□□□ -0.74
USH2A-203ENST00000463147 RNF19BQ6ZMZ0 732 aa10.41□□□□□ -0.74
USH2A-203ENST00000463147 GMPR2Q9P2T1 348 aaKnown RBP10.41□□□□□ -0.74
USH2A-203ENST00000463147 USP46P62068 366 aa10.4□□□□□ -0.74
USH2A-203ENST00000463147 SENP2Q9HC62 589 aa10.4□□□□□ -0.74
USH2A-203ENST00000463147 NLRP7Q8WX94 980 aa10.39□□□□□ -0.75
USH2A-203ENST00000463147 PHOX2BQ99453 314 aa10.39□□□□□ -0.75
USH2A-203ENST00000463147 USB1Q9BQ65 265 aaKnown RBP10.39□□□□□ -0.75
USH2A-203ENST00000463147 DACH1Q9UI36 760 aa10.39□□□□□ -0.75
USH2A-203ENST00000463147 TULP1O00294 542 aaPredicted RBP10.38□□□□□ -0.75
USH2A-203ENST00000463147 CD46P15529 392 aa10.38□□□□□ -0.75
USH2A-203ENST00000463147 KDM4AO75164 1064 aa10.37□□□□□ -0.75
USH2A-203ENST00000463147 DXOO77932 396 aaKnown RBP10.36□□□□□ -0.75
USH2A-203ENST00000463147 SMPD1P17405 629 aa10.36□□□□□ -0.75
USH2A-203ENST00000463147 PLCB2Q00722 1185 aa10.36□□□□□ -0.75
USH2A-203ENST00000463147 INSM1Q01101 510 aaPredicted RBP10.36□□□□□ -0.75
USH2A-203ENST00000463147 MAP2K5Q13163 448 aa10.35□□□□□ -0.75
USH2A-203ENST00000463147 KIFC2Q96AC6 838 aa10.35□□□□□ -0.75
USH2A-203ENST00000463147 ATP13A2Q9NQ11 1180 aa10.35□□□□□ -0.75
USH2A-203ENST00000463147 WNT7BP56706 349 aa10.34□□□□□ -0.75
USH2A-203ENST00000463147 MRGPRX2Q96LB1 330 aa10.34□□□□□ -0.75
USH2A-203ENST00000463147 STK17AQ9UEE5 414 aa10.34□□□□□ -0.75
USH2A-203ENST00000463147 WIPF1O43516 503 aa10.33□□□□□ -0.76
USH2A-203ENST00000463147 NFX1Q12986 1120 aaKnown RBP10.32□□□□□ -0.76
USH2A-203ENST00000463147 TRIM47Q96LD4 638 aa10.32□□□□□ -0.76
USH2A-203ENST00000463147 CCDC24Q8N4L8 307 aa10.3□□□□□ -0.76
USH2A-203ENST00000463147 MINK1Q8N4C8 1332 aaPredicted RBP10.3□□□□□ -0.76
USH2A-203ENST00000463147 IRF6O14896 467 aa10.29□□□□□ -0.76
USH2A-203ENST00000463147 RC3H1Q5TC82 1133 aaKnown RBP10.29□□□□□ -0.76
USH2A-203ENST00000463147 J3QL48 77 aa10.28□□□□□ -0.76
USH2A-203ENST00000463147 TERTO14746 1132 aaKnown RBP10.27□□□□□ -0.77
USH2A-203ENST00000463147 HOXA2O43364 376 aa10.27□□□□□ -0.77
USH2A-203ENST00000463147 JUNDP17535 347 aa10.26□□□□□ -0.77
USH2A-203ENST00000463147 CLCN1P35523 988 aa10.25□□□□□ -0.77
USH2A-203ENST00000463147 MDM2Q00987 491 aaPredicted RBP10.25□□□□□ -0.77
USH2A-203ENST00000463147 HPS1Q92902 700 aa10.25□□□□□ -0.77
USH2A-203ENST00000463147 SLC16A10Q8TF71 515 aa10.24□□□□□ -0.77
USH2A-203ENST00000463147 SNRPBP14678 240 aaKnown RBP10.23□□□□□ -0.77
USH2A-203ENST00000463147 RETREG3Q86VR2 466 aa10.23□□□□□ -0.77
USH2A-203ENST00000463147 NUTM1Q86Y26 1132 aa10.23□□□□□ -0.77
USH2A-203ENST00000463147 GPCPD1Q9NPB8 672 aa10.23□□□□□ -0.77
USH2A-203ENST00000463147 FAM181BA6NEQ2 426 aa10.22□□□□□ -0.77
USH2A-203ENST00000463147 SLC24A1O60721 1099 aa10.22□□□□□ -0.77
USH2A-203ENST00000463147 SKOR1P84550 965 aa10.22□□□□□ -0.77
USH2A-203ENST00000463147 KRI1Q8N9T8 703 aaKnown RBP10.22□□□□□ -0.77
USH2A-203ENST00000463147 ALDH1A1P00352 501 aa10.21□□□□□ -0.77
USH2A-203ENST00000463147 NPAS3Q8IXF0 933 aa10.2□□□□□ -0.78
USH2A-203ENST00000463147 EHBP1Q8NDI1 1231 aa10.2□□□□□ -0.78
USH2A-203ENST00000463147 NUDT12Q9BQG2 462 aa10.2□□□□□ -0.78
USH2A-203ENST00000463147 FAM217BQ9NTX9 383 aaPredicted RBP10.19□□□□□ -0.78
USH2A-203ENST00000463147 WASF2Q9Y6W5 498 aa10.19□□□□□ -0.78
USH2A-203ENST00000463147 HAP1P54257 671 aaPredicted RBP10.18□□□□□ -0.78
USH2A-203ENST00000463147 HLA-CQ95604 372 aa10.17□□□□□ -0.78
USH2A-203ENST00000463147 CCDC102AQ96A19 550 aa10.17□□□□□ -0.78
USH2A-203ENST00000463147 NXF1Q9UBU9 619 aaKnown RBP10.16□□□□□ -0.78
USH2A-203ENST00000463147 SIAH2O43255 324 aa10.15□□□□□ -0.78
USH2A-203ENST00000463147 CCNYL3P0C7X3 344 aa10.15□□□□□ -0.78
USH2A-203ENST00000463147 FDX1P10109 184 aa10.15□□□□□ -0.78
USH2A-203ENST00000463147 MS4A1P11836 297 aa10.15□□□□□ -0.78
USH2A-203ENST00000463147 CAPN5O15484 640 aaPredicted RBP10.14□□□□□ -0.79
USH2A-203ENST00000463147 PLEKHG3A1L390 1219 aa10.13□□□□□ -0.79
USH2A-203ENST00000463147 C6orf229H3BNL8 230 aa10.13□□□□□ -0.79
USH2A-203ENST00000463147 GUCA2AQ02747 115 aa10.13□□□□□ -0.79
USH2A-203ENST00000463147 PTPRNQ16849 979 aa10.13□□□□□ -0.79
USH2A-203ENST00000463147 IRF7Q92985 503 aa10.13□□□□□ -0.79
USH2A-203ENST00000463147 SPDYE5A6NIY4 337 aa10.12□□□□□ -0.79
USH2A-203ENST00000463147 SYMPKQ92797 1274 aaKnown RBP10.12□□□□□ -0.79
USH2A-203ENST00000463147 MPNDQ8N594 471 aa10.11□□□□□ -0.79
USH2A-203ENST00000463147 PTCRAQ6ISU1 281 aaPredicted RBP10.1□□□□□ -0.79
USH2A-203ENST00000463147 EVA1BQ9NVM1 165 aa10.1□□□□□ -0.79
USH2A-203ENST00000463147 VARSP26640 1264 aaKnown RBP10.09□□□□□ -0.79
USH2A-203ENST00000463147 SH3BP2P78314 561 aa10.09□□□□□ -0.79
USH2A-203ENST00000463147 DESI1Q6ICB0 168 aa10.09□□□□□ -0.79
USH2A-203ENST00000463147 KDM2AQ9Y2K7 1162 aa10.08□□□□□ -0.8
USH2A-203ENST00000463147 KCNH2Q12809 1159 aa10.07□□□□□ -0.8
USH2A-203ENST00000463147 LCE2CQ5TA81 110 aa10.07□□□□□ -0.8
USH2A-203ENST00000463147 TRIM46Q7Z4K8 759 aa10.07□□□□□ -0.8
USH2A-203ENST00000463147 VSIG10Q8N0Z9 540 aa10.07□□□□□ -0.8
USH2A-203ENST00000463147 UNC93B1Q9H1C4 597 aa10.07□□□□□ -0.8
USH2A-203ENST00000463147 SSTR3P32745 418 aaPredicted RBP10.06□□□□□ -0.8
USH2A-203ENST00000463147 PCDHGC3Q9UN70 934 aa10.06□□□□□ -0.8
USH2A-203ENST00000463147 BMP1P13497 986 aa10.05□□□□□ -0.8
USH2A-203ENST00000463147 DIXDC1Q155Q3 683 aa10.05□□□□□ -0.8
USH2A-203ENST00000463147 ZSCAN1Q8NBB4 408 aa10.05□□□□□ -0.8
USH2A-203ENST00000463147 SPIRE2Q8WWL2 714 aa10.05□□□□□ -0.8
USH2A-203ENST00000463147 GJA5P36382 358 aa10.04□□□□□ -0.8
USH2A-203ENST00000463147 MTMR2Q13614 643 aa10.04□□□□□ -0.8
USH2A-203ENST00000463147 SCARF1Q14162 830 aa10.04□□□□□ -0.8
USH2A-203ENST00000463147 H3BM21 787 aa10.03□□□□□ -0.8
USH2A-203ENST00000463147 ZNF511Q8NB15 262 aa10.03□□□□□ -0.8
USH2A-203ENST00000463147 PRR7Q8TB68 274 aa10.03□□□□□ -0.8
USH2A-203ENST00000463147 BAP1Q92560 729 aa10.03□□□□□ -0.8
USH2A-203ENST00000463147 GMPRP36959 345 aa10.02□□□□□ -0.81
USH2A-203ENST00000463147 ZFP42Q96MM3 310 aa10.02□□□□□ -0.81
USH2A-203ENST00000463147 NNTQ13423 1086 aa10.01□□□□□ -0.81
USH2A-203ENST00000463147 FAM174AQ8TBP5 190 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms