RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.34□□□□□ -0.43
GARNL3-212ENST00000463005 RXRBP28702 533 aa12.34□□□□□ -0.43
GARNL3-212ENST00000463005 AHDC1Q5TGY3 1603 aaPredicted RBP12.33□□□□□ -0.43
GARNL3-212ENST00000463005 TRIM52Q96A61 297 aa12.33□□□□□ -0.44
GARNL3-212ENST00000463005 DIP2AQ14689 1571 aa12.32□□□□□ -0.44
GARNL3-212ENST00000463005 ANKRD50Q9ULJ7 1429 aa12.32□□□□□ -0.44
GARNL3-212ENST00000463005 DCAF8Q5TAQ9 597 aa12.32□□□□□ -0.44
GARNL3-212ENST00000463005 RNF25Q96BH1 459 aaPredicted RBP12.32□□□□□ -0.44
GARNL3-212ENST00000463005 LRP6O75581 1613 aa12.32□□□□□ -0.44
GARNL3-212ENST00000463005 CHGAP10645 457 aaKnown RBP12.31□□□□□ -0.44
GARNL3-212ENST00000463005 CHADLQ6NUI6 762 aa12.31□□□□□ -0.44
GARNL3-212ENST00000463005 CDK12Q9NYV4 1490 aaPredicted RBP12.31□□□□□ -0.44
GARNL3-212ENST00000463005 ADAMTS13Q76LX8 1427 aa12.3□□□□□ -0.44
GARNL3-212ENST00000463005 RASEFQ8IZ41 740 aa12.3□□□□□ -0.44
GARNL3-212ENST00000463005 AMOTL2Q9Y2J4 779 aa12.3□□□□□ -0.44
GARNL3-212ENST00000463005 PAXIP1Q6ZW49 1069 aaPredicted RBP12.28□□□□□ -0.44
GARNL3-212ENST00000463005 BRINP3Q76B58 766 aa12.28□□□□□ -0.44
GARNL3-212ENST00000463005 LRRC59Q96AG4 307 aaKnown RBP12.28□□□□□ -0.44
GARNL3-212ENST00000463005 TRPM2O94759 1503 aa12.27□□□□□ -0.44
GARNL3-212ENST00000463005 NUTM2BA6NNL0 878 aaPredicted RBP12.27□□□□□ -0.45
GARNL3-212ENST00000463005 NUTM2EB1AL46 878 aaPredicted RBP12.27□□□□□ -0.45
GARNL3-212ENST00000463005 FAM50AQ14320 339 aaKnown RBP12.27□□□□□ -0.45
GARNL3-212ENST00000463005 NUTM2AQ8IVF1 878 aaPredicted RBP12.27□□□□□ -0.45
GARNL3-212ENST00000463005 BBXQ8WY36 941 aaPredicted RBP12.27□□□□□ -0.45
GARNL3-212ENST00000463005 CFAP44Q96MT7 982 aa12.27□□□□□ -0.45
GARNL3-212ENST00000463005 DCCP43146 1447 aa12.27□□□□□ -0.45
GARNL3-212ENST00000463005 SETD5Q9C0A6 1442 aa12.27□□□□□ -0.45
GARNL3-212ENST00000463005 E9PCH4 1651 aa12.26□□□□□ -0.45
GARNL3-212ENST00000463005 GSE1Q14687 1217 aa12.26□□□□□ -0.45
GARNL3-212ENST00000463005 NUTM2DQ5VT03 806 aaPredicted RBP12.26□□□□□ -0.45
GARNL3-212ENST00000463005 UNC13BO14795 1591 aa12.26□□□□□ -0.45
GARNL3-212ENST00000463005 RBM6P78332 1123 aaKnown RBP12.25□□□□□ -0.45
GARNL3-212ENST00000463005 AFF2P51816 1311 aa12.25□□□□□ -0.45
GARNL3-212ENST00000463005 QTRT2Q9H974 415 aaKnown RBP12.24□□□□□ -0.45
GARNL3-212ENST00000463005 NHSL1Q5SYE7 1610 aa12.23□□□□□ -0.45
GARNL3-212ENST00000463005 PTPRUQ92729 1446 aa12.23□□□□□ -0.45
GARNL3-212ENST00000463005 NGLY1Q96IV0 654 aa12.22□□□□□ -0.45
GARNL3-212ENST00000463005 IQGAP3Q86VI3 1631 aa12.22□□□□□ -0.45
GARNL3-212ENST00000463005 ASXL1Q8IXJ9 1541 aa12.21□□□□□ -0.45
GARNL3-212ENST00000463005 MST1RQ04912 1400 aa12.21□□□□□ -0.45
GARNL3-212ENST00000463005 FAM212AQ96EL1 285 aa12.21□□□□□ -0.45
GARNL3-212ENST00000463005 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.21□□□□□ -0.45
GARNL3-212ENST00000463005 XRN1Q8IZH2 1706 aaKnown RBP12.2□□□□□ -0.46
GARNL3-212ENST00000463005 ROCK1Q13464 1354 aa12.2□□□□□ -0.46
GARNL3-212ENST00000463005 C8orf37Q96NL8 207 aa12.2□□□□□ -0.46
GARNL3-212ENST00000463005 NUP155O75694 1391 aa12.19□□□□□ -0.46
GARNL3-212ENST00000463005 SETBP1Q9Y6X0 1596 aa12.19□□□□□ -0.46
GARNL3-212ENST00000463005 NRXN3Q9Y4C0 1643 aa12.18□□□□□ -0.46
GARNL3-212ENST00000463005 PNPLA6Q8IY17 1366 aa12.18□□□□□ -0.46
GARNL3-212ENST00000463005 PYGBP11216 843 aa12.17□□□□□ -0.46
GARNL3-212ENST00000463005 ZNF326Q5BKZ1 582 aaKnown RBP12.17□□□□□ -0.46
GARNL3-212ENST00000463005 RGS12O14924 1447 aa12.17□□□□□ -0.46
GARNL3-212ENST00000463005 ADGRL3Q9HAR2 1447 aa12.16□□□□□ -0.46
GARNL3-212ENST00000463005 SPHKAPQ2M3C7 1700 aa12.16□□□□□ -0.46
GARNL3-212ENST00000463005 METP08581 1390 aa12.16□□□□□ -0.46
GARNL3-212ENST00000463005 TRPC5Q9UL62 973 aaPredicted RBP12.15□□□□□ -0.46
GARNL3-212ENST00000463005 ATAD2Q6PL18 1390 aa12.15□□□□□ -0.46
GARNL3-212ENST00000463005 SOS2Q07890 1332 aaPredicted RBP12.14□□□□□ -0.47
GARNL3-212ENST00000463005 ADAMTS2O95450 1211 aa12.14□□□□□ -0.47
GARNL3-212ENST00000463005 CCDC125Q86Z20 511 aa12.14□□□□□ -0.47
GARNL3-212ENST00000463005 DDX17Q92841 729 aaKnown RBP12.14□□□□□ -0.47
GARNL3-212ENST00000463005 USP21Q9UK80 565 aa12.14□□□□□ -0.47
GARNL3-212ENST00000463005 LAMC1P11047 1609 aa12.14□□□□□ -0.47
GARNL3-212ENST00000463005 RIOK3O14730 519 aaKnown RBP12.13□□□□□ -0.47
GARNL3-212ENST00000463005 FNBP4Q8N3X1 1017 aaPredicted RBP12.13□□□□□ -0.47
GARNL3-212ENST00000463005 NALCNQ8IZF0 1738 aa12.13□□□□□ -0.47
GARNL3-212ENST00000463005 KIF1BO60333 1816 aa12.13□□□□□ -0.47
GARNL3-212ENST00000463005 C1orf167Q5SNV9 1468 aa12.13□□□□□ -0.47
GARNL3-212ENST00000463005 PTCH1Q13635 1447 aa12.12□□□□□ -0.47
GARNL3-212ENST00000463005 HS6ST3Q8IZP7 471 aa12.12□□□□□ -0.47
GARNL3-212ENST00000463005 TSPYL2Q9H2G4 693 aaPredicted RBP12.12□□□□□ -0.47
GARNL3-212ENST00000463005 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
GARNL3-212ENST00000463005 VGFO15240 615 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-212ENST00000463005 SPRYD3Q8NCJ5 442 aa12.11□□□□□ -0.47
GARNL3-212ENST00000463005 TSHZ2Q9NRE2 1034 aa12.11□□□□□ -0.47
GARNL3-212ENST00000463005 KDM2AQ9Y2K7 1162 aa12.11□□□□□ -0.47
GARNL3-212ENST00000463005 PRKAR2AP13861 404 aaKnown RBP12.1□□□□□ -0.47
GARNL3-212ENST00000463005 ORAI2Q96SN7 254 aa12.1□□□□□ -0.47
GARNL3-212ENST00000463005 FARP1Q9Y4F1 1045 aaPredicted RBP12.09□□□□□ -0.47
GARNL3-212ENST00000463005 NEXMIFQ5QGS0 1516 aa12.09□□□□□ -0.47
GARNL3-212ENST00000463005 COL22A1Q8NFW1 1626 aaPredicted RBP12.08□□□□□ -0.48
GARNL3-212ENST00000463005 NKX1-1Q15270 411 aaPredicted RBP12.08□□□□□ -0.48
GARNL3-212ENST00000463005 ATRNO75882 1429 aa12.08□□□□□ -0.48
GARNL3-212ENST00000463005 ITGAEP38570 1179 aa12.07□□□□□ -0.48
GARNL3-212ENST00000463005 MARF1Q9Y4F3 1742 aaKnown RBP12.07□□□□□ -0.48
GARNL3-212ENST00000463005 RPGRIP1LQ68CZ1 1315 aa12.07□□□□□ -0.48
GARNL3-212ENST00000463005 NPHP3Q7Z494 1330 aa12.07□□□□□ -0.48
GARNL3-212ENST00000463005 PRAG1Q86YV5 1406 aa12.06□□□□□ -0.48
GARNL3-212ENST00000463005 CLTCL1P53675 1640 aa12.06□□□□□ -0.48
GARNL3-212ENST00000463005 HFM1A2PYH4 1435 aa12.05□□□□□ -0.48
GARNL3-212ENST00000463005 STK25O00506 426 aa12.05□□□□□ -0.48
GARNL3-212ENST00000463005 GJD4Q96KN9 370 aaPredicted RBP12.05□□□□□ -0.48
GARNL3-212ENST00000463005 ROBO2Q9HCK4 1378 aa12.05□□□□□ -0.48
GARNL3-212ENST00000463005 ESCO1Q5FWF5 840 aa12.04□□□□□ -0.48
GARNL3-212ENST00000463005 VSIG10Q8N0Z9 540 aa12.04□□□□□ -0.48
GARNL3-212ENST00000463005 LRPPRCP42704 1394 aaKnown RBP12.04□□□□□ -0.48
GARNL3-212ENST00000463005 BCL9LQ86UU0 1499 aa12.03□□□□□ -0.48
GARNL3-212ENST00000463005 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.03□□□□□ -0.48
GARNL3-212ENST00000463005 CHRM1P11229 460 aaPredicted RBP12.03□□□□□ -0.48
GARNL3-212ENST00000463005 FXR2P51116 673 aaKnown RBP eCLIP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms