RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 HFM1A2PYH4 1435 aa17.74■□□□□ 0.43
PCCB-203ENST00000462542 ESCO1Q5FWF5 840 aa17.74■□□□□ 0.43
PCCB-203ENST00000462542 PRAG1Q86YV5 1406 aa17.73■□□□□ 0.43
PCCB-203ENST00000462542 COL22A1Q8NFW1 1626 aaPredicted RBP17.73■□□□□ 0.43
PCCB-203ENST00000462542 KIF1BO60333 1816 aa17.72■□□□□ 0.43
PCCB-203ENST00000462542 BCL9LQ86UU0 1499 aa17.72■□□□□ 0.43
PCCB-203ENST00000462542 LRPPRCP42704 1394 aaKnown RBP17.71■□□□□ 0.43
PCCB-203ENST00000462542 CLTCL1P53675 1640 aa17.71■□□□□ 0.43
PCCB-203ENST00000462542 MYOM2P54296 1465 aa17.7■□□□□ 0.42
PCCB-203ENST00000462542 FOXO3O43524 673 aa17.69■□□□□ 0.42
PCCB-203ENST00000462542 UNC5CLQ8IV45 518 aa17.68■□□□□ 0.42
PCCB-203ENST00000462542 BLMP54132 1417 aaPredicted RBP17.65■□□□□ 0.42
PCCB-203ENST00000462542 PXDNQ92626 1479 aa17.65■□□□□ 0.42
PCCB-203ENST00000462542 MARF1Q9Y4F3 1742 aaKnown RBP17.65■□□□□ 0.42
PCCB-203ENST00000462542 SF3B2Q13435 895 aaKnown RBP17.65■□□□□ 0.42
PCCB-203ENST00000462542 XPCQ01831 940 aaPredicted RBP17.63■□□□□ 0.41
PCCB-203ENST00000462542 CDC42BPGQ6DT37 1551 aa17.62■□□□□ 0.41
PCCB-203ENST00000462542 SPATA31A3Q5VYP0 1347 aa17.62■□□□□ 0.41
PCCB-203ENST00000462542 RALGAPBQ86X10 1494 aa17.61■□□□□ 0.41
PCCB-203ENST00000462542 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.61■□□□□ 0.41
PCCB-203ENST00000462542 ONECUT3O60422 494 aaPredicted RBP17.6■□□□□ 0.41
PCCB-203ENST00000462542 SLIT2O94813 1529 aa17.6■□□□□ 0.41
PCCB-203ENST00000462542 NAIPQ13075 1403 aa17.59■□□□□ 0.41
PCCB-203ENST00000462542 KRT28Q7Z3Y7 464 aa17.59■□□□□ 0.41
PCCB-203ENST00000462542 WAPLQ7Z5K2 1190 aa17.59■□□□□ 0.41
PCCB-203ENST00000462542 DEFB132Q7Z7B7 95 aa17.59■□□□□ 0.41
PCCB-203ENST00000462542 SEPT12Q8IYM1 358 aa17.59■□□□□ 0.41
PCCB-203ENST00000462542 SLC4A1APQ9BWU0 796 aaKnown RBP17.59■□□□□ 0.41
PCCB-203ENST00000462542 NUTM2FA1L443 756 aa17.58■□□□□ 0.4
PCCB-203ENST00000462542 PSME1Q06323 249 aa17.58■□□□□ 0.4
PCCB-203ENST00000462542 VPS72Q15906 364 aa17.58■□□□□ 0.4
PCCB-203ENST00000462542 STK26Q9P289 416 aa17.58■□□□□ 0.4
PCCB-203ENST00000462542 ABCC11Q96J66 1382 aa17.57■□□□□ 0.4
PCCB-203ENST00000462542 PPLO60437 1756 aa17.57■□□□□ 0.4
PCCB-203ENST00000462542 GLI3P10071 1580 aa17.57■□□□□ 0.4
PCCB-203ENST00000462542 TECPR2O15040 1411 aa17.56■□□□□ 0.4
PCCB-203ENST00000462542 HAP1P54257 671 aaPredicted RBP17.56■□□□□ 0.4
PCCB-203ENST00000462542 SIRT1Q96EB6 747 aa17.56■□□□□ 0.4
PCCB-203ENST00000462542 CCDC144AA2RUR9 1427 aa17.55■□□□□ 0.4
PCCB-203ENST00000462542 KRT27Q7Z3Y8 459 aa17.55■□□□□ 0.4
PCCB-203ENST00000462542 PPARGC1BQ86YN6 1023 aaKnown RBP17.55■□□□□ 0.4
PCCB-203ENST00000462542 ADGRF5Q8IZF2 1346 aa17.54■□□□□ 0.4
PCCB-203ENST00000462542 CCDC9Q9Y3X0 531 aaKnown RBP17.53■□□□□ 0.4
PCCB-203ENST00000462542 ANKRD30BQ9BXX2 1392 aa17.53■□□□□ 0.4
PCCB-203ENST00000462542 BRWD3Q6RI45 1802 aa17.52■□□□□ 0.4
PCCB-203ENST00000462542 BAG6P46379 1132 aa17.52■□□□□ 0.4
PCCB-203ENST00000462542 KIF1AQ12756 1690 aa17.52■□□□□ 0.39
PCCB-203ENST00000462542 RGL3Q3MIN7 710 aa17.51■□□□□ 0.39
PCCB-203ENST00000462542 TMEM132EQ6IEE7 984 aa17.51■□□□□ 0.39
PCCB-203ENST00000462542 RRBP1Q9P2E9 1410 aaKnown RBP17.51■□□□□ 0.39
PCCB-203ENST00000462542 PHF8Q9UPP1 1060 aa17.51■□□□□ 0.39
PCCB-203ENST00000462542 USP32Q8NFA0 1604 aa17.5■□□□□ 0.39
PCCB-203ENST00000462542 CABLES1Q8TDN4 633 aa17.49■□□□□ 0.39
PCCB-203ENST00000462542 LRP5O75197 1615 aa17.49■□□□□ 0.39
PCCB-203ENST00000462542 SBNO1A3KN83 1393 aa17.49■□□□□ 0.39
PCCB-203ENST00000462542 TNS3Q68CZ2 1445 aa17.48■□□□□ 0.39
PCCB-203ENST00000462542 FMN2Q9NZ56 1722 aa17.48■□□□□ 0.39
PCCB-203ENST00000462542 ARHGEF10O15013 1369 aa17.48■□□□□ 0.39
PCCB-203ENST00000462542 PLEKHH1Q9ULM0 1364 aa17.48■□□□□ 0.39
PCCB-203ENST00000462542 NWD2Q9ULI1 1742 aa17.47■□□□□ 0.39
PCCB-203ENST00000462542 FAM83GA6ND36 823 aa17.47■□□□□ 0.39
PCCB-203ENST00000462542 HRCP23327 699 aa17.47■□□□□ 0.39
PCCB-203ENST00000462542 LMOD2Q6P5Q4 547 aa17.47■□□□□ 0.39
PCCB-203ENST00000462542 YTHDC2Q9H6S0 1430 aaKnown RBP17.47■□□□□ 0.39
PCCB-203ENST00000462542 KNDC1Q76NI1 1749 aa17.45■□□□□ 0.38
PCCB-203ENST00000462542 A0A0G2JS52 829 aa17.45■□□□□ 0.38
PCCB-203ENST00000462542 MYT1Q01538 1121 aa17.45■□□□□ 0.38
PCCB-203ENST00000462542 SPATA31E1Q6ZUB1 1445 aa17.45■□□□□ 0.38
PCCB-203ENST00000462542 PSDA5PKW4 1024 aaPredicted RBP17.44■□□□□ 0.38
PCCB-203ENST00000462542 C14orf93Q9H972 538 aaKnown RBP17.44■□□□□ 0.38
PCCB-203ENST00000462542 DHX57Q6P158 1386 aaKnown RBP17.43■□□□□ 0.38
PCCB-203ENST00000462542 FAM98CQ17RN3 349 aaKnown RBP17.43■□□□□ 0.38
PCCB-203ENST00000462542 PIK3C2GO75747 1445 aa17.43■□□□□ 0.38
PCCB-203ENST00000462542 PLEKHG5O94827 1062 aa17.42■□□□□ 0.38
PCCB-203ENST00000462542 BTG4Q9NY30 223 aa17.42■□□□□ 0.38
PCCB-203ENST00000462542 NRXN1Q9ULB1 1477 aa17.42■□□□□ 0.38
PCCB-203ENST00000462542 PLCH1Q4KWH8 1693 aa17.42■□□□□ 0.38
PCCB-203ENST00000462542 EN1Q05925 392 aaPredicted RBP17.41■□□□□ 0.38
PCCB-203ENST00000462542 RGPD8O14715 1765 aaPredicted RBP17.4■□□□□ 0.38
PCCB-203ENST00000462542 MPHOSPH9Q99550 1183 aa17.4■□□□□ 0.38
PCCB-203ENST00000462542 IFT172Q9UG01 1749 aa17.39■□□□□ 0.37
PCCB-203ENST00000462542 PMFBP1Q8TBY8 1022 aa17.38■□□□□ 0.37
PCCB-203ENST00000462542 PRAM1Q96QH2 718 aa17.38■□□□□ 0.37
PCCB-203ENST00000462542 R3HDM1Q15032 1099 aaKnown RBP17.37■□□□□ 0.37
PCCB-203ENST00000462542 POGKQ9P215 609 aa17.37■□□□□ 0.37
PCCB-203ENST00000462542 CFAP70Q5T0N1 1121 aa17.36■□□□□ 0.37
PCCB-203ENST00000462542 SPATA31A5Q5VU36 1347 aa17.36■□□□□ 0.37
PCCB-203ENST00000462542 SPATA31A7Q8IWB4 1347 aa17.36■□□□□ 0.37
PCCB-203ENST00000462542 ACIN1Q9UKV3 1341 aaKnown RBP17.36■□□□□ 0.37
PCCB-203ENST00000462542 GPRASP1Q5JY77 1395 aa17.36■□□□□ 0.37
PCCB-203ENST00000462542 ANKARQ7Z5J8 1434 aa17.36■□□□□ 0.37
PCCB-203ENST00000462542 SAFB2Q14151 953 aaKnown RBP eCLIP17.35■□□□□ 0.37
PCCB-203ENST00000462542 DISP2A7MBM2 1401 aa17.34■□□□□ 0.37
PCCB-203ENST00000462542 RGPD1P0DJD0 1748 aa17.34■□□□□ 0.37
PCCB-203ENST00000462542 ABCA3Q99758 1704 aa17.34■□□□□ 0.37
PCCB-203ENST00000462542 FAM196AQ6ZSG2 479 aa17.33■□□□□ 0.36
PCCB-203ENST00000462542 COL14A1Q05707 1796 aaKnown RBP17.33■□□□□ 0.36
PCCB-203ENST00000462542 FAM182BQ5T319 152 aa17.32■□□□□ 0.36
PCCB-203ENST00000462542 NRAPQ86VF7 1730 aa17.32■□□□□ 0.36
PCCB-203ENST00000462542 EIF3AQ14152 1382 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms