RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-204ENST00000461862 GRXCR2A6NFK2 248 aa15.42■□□□□ 0.06
SCNM1-204ENST00000461862 KCNV2Q8TDN2 545 aa15.42■□□□□ 0.06
SCNM1-204ENST00000461862 TTC37Q6PGP7 1564 aa15.41■□□□□ 0.06
SCNM1-204ENST00000461862 COL17A1Q9UMD9 1497 aaPredicted RBP15.41■□□□□ 0.06
SCNM1-204ENST00000461862 PLEKHD1A6NEE1 506 aa15.4■□□□□ 0.06
SCNM1-204ENST00000461862 THSD4Q6ZMP0 1018 aa15.4■□□□□ 0.06
SCNM1-204ENST00000461862 KIAA1468Q9P260 1216 aa15.4■□□□□ 0.06
SCNM1-204ENST00000461862 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.39■□□□□ 0.05
SCNM1-204ENST00000461862 TRIM6-TRIM34B2RNG4 842 aa15.39■□□□□ 0.05
SCNM1-204ENST00000461862 PLCB2Q00722 1185 aa15.39■□□□□ 0.05
SCNM1-204ENST00000461862 FAM50AQ14320 339 aaKnown RBP15.39■□□□□ 0.05
SCNM1-204ENST00000461862 WNT2BQ93097 391 aa15.39■□□□□ 0.05
SCNM1-204ENST00000461862 CD109Q6YHK3 1445 aa15.39■□□□□ 0.05
SCNM1-204ENST00000461862 OSBPP22059 807 aa15.38■□□□□ 0.05
SCNM1-204ENST00000461862 CDC42BPAQ5VT25 1732 aa15.37■□□□□ 0.05
SCNM1-204ENST00000461862 ABCA9Q8IUA7 1624 aa15.37■□□□□ 0.05
SCNM1-204ENST00000461862 ONECUT3O60422 494 aaPredicted RBP15.37■□□□□ 0.05
SCNM1-204ENST00000461862 PTPN5P54829 565 aa15.37■□□□□ 0.05
SCNM1-204ENST00000461862 GOLGA8CPA6NN73 597 aa15.36■□□□□ 0.05
SCNM1-204ENST00000461862 GPATCH8Q9UKJ3 1502 aaKnown RBP15.34■□□□□ 0.05
SCNM1-204ENST00000461862 CCER1Q8TC90 406 aaPredicted RBP15.34■□□□□ 0.05
SCNM1-204ENST00000461862 ARHGEF1Q92888 912 aaKnown RBP15.34■□□□□ 0.05
SCNM1-204ENST00000461862 CDHR5Q9HBB8 845 aa15.34■□□□□ 0.05
SCNM1-204ENST00000461862 SEPT9Q9UHD8 586 aaPredicted RBP15.34■□□□□ 0.05
SCNM1-204ENST00000461862 TSKSQ9UJT2 592 aa15.34■□□□□ 0.05
SCNM1-204ENST00000461862 DNMT1P26358 1616 aaKnown RBP15.33■□□□□ 0.04
SCNM1-204ENST00000461862 PREX2Q70Z35 1606 aa15.33■□□□□ 0.04
SCNM1-204ENST00000461862 PLA2G2EQ9NZK7 142 aa15.33■□□□□ 0.04
SCNM1-204ENST00000461862 LAPTM4BQ86VI4 370 aa15.32■□□□□ 0.04
SCNM1-204ENST00000461862 AKNAQ7Z591 1439 aa15.32■□□□□ 0.04
SCNM1-204ENST00000461862 SETD5Q9C0A6 1442 aa15.31■□□□□ 0.04
SCNM1-204ENST00000461862 GCC2Q8IWJ2 1684 aa15.31■□□□□ 0.04
SCNM1-204ENST00000461862 KDM6BO15054 1643 aa15.3■□□□□ 0.04
SCNM1-204ENST00000461862 ITGAEP38570 1179 aa15.3■□□□□ 0.04
SCNM1-204ENST00000461862 CAMSAP2Q08AD1 1489 aa15.3■□□□□ 0.04
SCNM1-204ENST00000461862 MYO5CQ9NQX4 1742 aa15.3■□□□□ 0.04
SCNM1-204ENST00000461862 CROCC2H7BZ55 1655 aa15.29■□□□□ 0.04
SCNM1-204ENST00000461862 MLLT3P42568 568 aaPredicted RBP15.29■□□□□ 0.04
SCNM1-204ENST00000461862 FAM198AQ9UFP1 575 aa15.29■□□□□ 0.04
SCNM1-204ENST00000461862 HFM1A2PYH4 1435 aa15.28■□□□□ 0.04
SCNM1-204ENST00000461862 CDC42BPBQ9Y5S2 1711 aa15.27■□□□□ 0.04
SCNM1-204ENST00000461862 ANKK1Q8NFD2 765 aa15.27■□□□□ 0.04
SCNM1-204ENST00000461862 CDCA7LQ96GN5 454 aa15.27■□□□□ 0.04
SCNM1-204ENST00000461862 ZFRQ96KR1 1074 aaKnown RBP15.27■□□□□ 0.04
SCNM1-204ENST00000461862 ADGBQ8N7X0 1667 aa15.27■□□□□ 0.03
SCNM1-204ENST00000461862 PTPRKQ15262 1439 aa15.26■□□□□ 0.03
SCNM1-204ENST00000461862 RAB3GAP2Q9H2M9 1393 aa15.26■□□□□ 0.03
SCNM1-204ENST00000461862 CLSPNQ9HAW4 1339 aa15.26■□□□□ 0.03
SCNM1-204ENST00000461862 BCAMP50895 628 aa15.26■□□□□ 0.03
SCNM1-204ENST00000461862 CFDP1Q9UEE9 299 aaPredicted RBP15.26■□□□□ 0.03
SCNM1-204ENST00000461862 DAPK1P53355 1430 aa15.26■□□□□ 0.03
SCNM1-204ENST00000461862 RAPGEF3O95398 923 aa15.25■□□□□ 0.03
SCNM1-204ENST00000461862 PRSS12P56730 875 aa15.25■□□□□ 0.03
SCNM1-204ENST00000461862 TEX14Q8IWB6 1497 aa15.25■□□□□ 0.03
SCNM1-204ENST00000461862 PLCH2O75038 1416 aa15.25■□□□□ 0.03
SCNM1-204ENST00000461862 ARHGEF5Q12774 1597 aa15.24■□□□□ 0.03
SCNM1-204ENST00000461862 C3orf80F5H4A9 247 aa15.24■□□□□ 0.03
SCNM1-204ENST00000461862 FAM98CQ17RN3 349 aaKnown RBP15.24■□□□□ 0.03
SCNM1-204ENST00000461862 CERKQ8TCT0 537 aa15.24■□□□□ 0.03
SCNM1-204ENST00000461862 FRMPD1Q5SYB0 1578 aa15.24■□□□□ 0.03
SCNM1-204ENST00000461862 ROCK1Q13464 1354 aa15.24■□□□□ 0.03
SCNM1-204ENST00000461862 ARAP3Q8WWN8 1544 aa15.23■□□□□ 0.03
SCNM1-204ENST00000461862 FANCAO15360 1455 aa15.23■□□□□ 0.03
SCNM1-204ENST00000461862 SOWAHBA6NEL2 793 aa15.23■□□□□ 0.03
SCNM1-204ENST00000461862 DHX57Q6P158 1386 aaKnown RBP15.23■□□□□ 0.03
SCNM1-204ENST00000461862 SHANK2Q9UPX8 1470 aa15.22■□□□□ 0.03
SCNM1-204ENST00000461862 ABCC5O15440 1437 aa15.22■□□□□ 0.03
SCNM1-204ENST00000461862 NAIPQ13075 1403 aa15.22■□□□□ 0.03
SCNM1-204ENST00000461862 SAMD9LQ8IVG5 1584 aa15.21■□□□□ 0.03
SCNM1-204ENST00000461862 PACS2Q86VP3 889 aa15.21■□□□□ 0.03
SCNM1-204ENST00000461862 NPDC1Q9NQX5 325 aaPredicted RBP15.21■□□□□ 0.03
SCNM1-204ENST00000461862 ARHGEF12Q9NZN5 1544 aa15.21■□□□□ 0.03
SCNM1-204ENST00000461862 PLEKHH2Q8IVE3 1493 aa15.2■□□□□ 0.02
SCNM1-204ENST00000461862 ZNF644Q9H582 1327 aaPredicted RBP15.2■□□□□ 0.02
SCNM1-204ENST00000461862 ARHGAP5Q13017 1502 aa15.2■□□□□ 0.02
SCNM1-204ENST00000461862 ADGRL2O95490 1459 aa15.2■□□□□ 0.02
SCNM1-204ENST00000461862 ACIN1Q9UKV3 1341 aaKnown RBP15.19■□□□□ 0.02
SCNM1-204ENST00000461862 NEO1Q92859 1461 aa15.19■□□□□ 0.02
SCNM1-204ENST00000461862 SMAPO00193 183 aa15.18■□□□□ 0.02
SCNM1-204ENST00000461862 ZNF777Q9ULD5 760 aaPredicted RBP15.18■□□□□ 0.02
SCNM1-204ENST00000461862 SCAPERQ9BY12 1400 aa15.17■□□□□ 0.02
SCNM1-204ENST00000461862 ADGRL1O94910 1474 aa15.16■□□□□ 0.02
SCNM1-204ENST00000461862 RBM27Q9P2N5 1060 aaKnown RBP15.16■□□□□ 0.02
SCNM1-204ENST00000461862 TRAPPC8Q9Y2L5 1435 aa15.16■□□□□ 0.02
SCNM1-204ENST00000461862 MAST1Q9Y2H9 1570 aa15.15■□□□□ 0.02
SCNM1-204ENST00000461862 CCDC141Q6ZP82 1450 aa15.15■□□□□ 0.02
SCNM1-204ENST00000461862 EFCAB2Q5VUJ9 269 aa15.15■□□□□ 0.02
SCNM1-204ENST00000461862 KIAA1107Q9UPP5 1409 aa15.15■□□□□ 0.02
SCNM1-204ENST00000461862 AFAP1Q8N556 730 aa15.14■□□□□ 0.01
SCNM1-204ENST00000461862 TTC13Q8NBP0 860 aa15.14■□□□□ 0.01
SCNM1-204ENST00000461862 WBP1LQ9NX94 342 aa15.14■□□□□ 0.01
SCNM1-204ENST00000461862 RICTORQ6R327 1708 aa15.14■□□□□ 0.01
SCNM1-204ENST00000461862 MBD5Q9P267 1494 aa15.14■□□□□ 0.01
SCNM1-204ENST00000461862 ABCC1P33527 1531 aa15.13■□□□□ 0.01
SCNM1-204ENST00000461862 SEMA3EO15041 775 aa15.13■□□□□ 0.01
SCNM1-204ENST00000461862 RSPH4AQ5TD94 716 aa15.13■□□□□ 0.01
SCNM1-204ENST00000461862 TATDN2Q93075 761 aa15.13■□□□□ 0.01
SCNM1-204ENST00000461862 YEATS2Q9ULM3 1422 aa15.13■□□□□ 0.01
SCNM1-204ENST00000461862 DENND4BO75064 1496 aaPredicted RBP15.13■□□□□ 0.01
SCNM1-204ENST00000461862 SYCP2Q9BX26 1530 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms