RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 RAB3GAP2Q9H2M9 1393 aa13.58□□□□□ -0.24
BRCA1-207ENST00000461798 COL16A1Q07092 1604 aaPredicted RBP13.57□□□□□ -0.24
BRCA1-207ENST00000461798 SETD1AO15047 1707 aaKnown RBP13.56□□□□□ -0.24
BRCA1-207ENST00000461798 PHLPP1O60346 1717 aa13.56□□□□□ -0.24
BRCA1-207ENST00000461798 PPLO60437 1756 aa13.56□□□□□ -0.24
BRCA1-207ENST00000461798 POTEAQ6S8J7 498 aa13.54□□□□□ -0.24
BRCA1-207ENST00000461798 LRRC59Q96AG4 307 aaKnown RBP13.54□□□□□ -0.24
BRCA1-207ENST00000461798 SIRT1Q96EB6 747 aa13.54□□□□□ -0.24
BRCA1-207ENST00000461798 C14orf93Q9H972 538 aaKnown RBP13.54□□□□□ -0.24
BRCA1-207ENST00000461798 LRPPRCP42704 1394 aaKnown RBP13.54□□□□□ -0.24
BRCA1-207ENST00000461798 ABCC11Q96J66 1382 aa13.54□□□□□ -0.24
BRCA1-207ENST00000461798 TECPR2O15040 1411 aa13.54□□□□□ -0.24
BRCA1-207ENST00000461798 ASXL1Q8IXJ9 1541 aa13.54□□□□□ -0.24
BRCA1-207ENST00000461798 PIK3C2GO75747 1445 aa13.53□□□□□ -0.24
BRCA1-207ENST00000461798 C1orf167Q5SNV9 1468 aa13.53□□□□□ -0.24
BRCA1-207ENST00000461798 TMEM132EQ6IEE7 984 aa13.51□□□□□ -0.25
BRCA1-207ENST00000461798 NRXN1Q9ULB1 1477 aa13.5□□□□□ -0.25
BRCA1-207ENST00000461798 ORAI2Q96SN7 254 aa13.5□□□□□ -0.25
BRCA1-207ENST00000461798 STK26Q9P289 416 aa13.5□□□□□ -0.25
BRCA1-207ENST00000461798 NALCNQ8IZF0 1738 aa13.5□□□□□ -0.25
BRCA1-207ENST00000461798 LRP6O75581 1613 aa13.5□□□□□ -0.25
BRCA1-207ENST00000461798 SOS2Q07890 1332 aaPredicted RBP13.49□□□□□ -0.25
BRCA1-207ENST00000461798 WAPLQ7Z5K2 1190 aa13.49□□□□□ -0.25
BRCA1-207ENST00000461798 IFT172Q9UG01 1749 aa13.48□□□□□ -0.25
BRCA1-207ENST00000461798 SHPRHQ149N8 1683 aa13.48□□□□□ -0.25
BRCA1-207ENST00000461798 ZNF772Q68DY9 489 aaPredicted RBP13.48□□□□□ -0.25
BRCA1-207ENST00000461798 DDX17Q92841 729 aaKnown RBP13.48□□□□□ -0.25
BRCA1-207ENST00000461798 STAC3Q96MF2 364 aa13.48□□□□□ -0.25
BRCA1-207ENST00000461798 NHSL1Q5SYE7 1610 aa13.48□□□□□ -0.25
BRCA1-207ENST00000461798 MYOM2P54296 1465 aa13.48□□□□□ -0.25
BRCA1-207ENST00000461798 YTHDC2Q9H6S0 1430 aaKnown RBP13.47□□□□□ -0.25
BRCA1-207ENST00000461798 CFAP70Q5T0N1 1121 aa13.47□□□□□ -0.25
BRCA1-207ENST00000461798 MEX3CQ5U5Q3 659 aaKnown RBP13.47□□□□□ -0.25
BRCA1-207ENST00000461798 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
BRCA1-207ENST00000461798 LAMC1P11047 1609 aa13.46□□□□□ -0.25
BRCA1-207ENST00000461798 PNPLA6Q8IY17 1366 aa13.46□□□□□ -0.25
BRCA1-207ENST00000461798 DHX57Q6P158 1386 aaKnown RBP13.45□□□□□ -0.26
BRCA1-207ENST00000461798 PLEKHH1Q9ULM0 1364 aa13.45□□□□□ -0.26
BRCA1-207ENST00000461798 CDC42BPGQ6DT37 1551 aa13.45□□□□□ -0.26
BRCA1-207ENST00000461798 NUTM2BA6NNL0 878 aaPredicted RBP13.45□□□□□ -0.26
BRCA1-207ENST00000461798 NUTM2EB1AL46 878 aaPredicted RBP13.45□□□□□ -0.26
BRCA1-207ENST00000461798 NUTM2AQ8IVF1 878 aaPredicted RBP13.45□□□□□ -0.26
BRCA1-207ENST00000461798 ESCO1Q5FWF5 840 aa13.44□□□□□ -0.26
BRCA1-207ENST00000461798 NPHP3Q7Z494 1330 aa13.43□□□□□ -0.26
BRCA1-207ENST00000461798 KNDC1Q76NI1 1749 aa13.42□□□□□ -0.26
BRCA1-207ENST00000461798 FOXO3O43524 673 aa13.41□□□□□ -0.26
BRCA1-207ENST00000461798 DCAF11Q8TEB1 546 aa13.41□□□□□ -0.26
BRCA1-207ENST00000461798 RXRBP28702 533 aa13.4□□□□□ -0.26
BRCA1-207ENST00000461798 AFF2P51816 1311 aa13.39□□□□□ -0.27
BRCA1-207ENST00000461798 NUTM2FA1L443 756 aa13.39□□□□□ -0.27
BRCA1-207ENST00000461798 PRAM1Q96QH2 718 aa13.39□□□□□ -0.27
BRCA1-207ENST00000461798 KDM2AQ9Y2K7 1162 aa13.39□□□□□ -0.27
BRCA1-207ENST00000461798 DLC1Q96QB1 1528 aa13.39□□□□□ -0.27
BRCA1-207ENST00000461798 ADGRB1O14514 1584 aa13.38□□□□□ -0.27
BRCA1-207ENST00000461798 PXDNQ92626 1479 aa13.38□□□□□ -0.27
BRCA1-207ENST00000461798 FNBP4Q8N3X1 1017 aaPredicted RBP13.37□□□□□ -0.27
BRCA1-207ENST00000461798 NGLY1Q96IV0 654 aa13.37□□□□□ -0.27
BRCA1-207ENST00000461798 C8orf37Q96NL8 207 aa13.37□□□□□ -0.27
BRCA1-207ENST00000461798 POGKQ9P215 609 aa13.37□□□□□ -0.27
BRCA1-207ENST00000461798 ADAMTS2O95450 1211 aa13.36□□□□□ -0.27
BRCA1-207ENST00000461798 QTRT2Q9H974 415 aaKnown RBP13.36□□□□□ -0.27
BRCA1-207ENST00000461798 PHF8Q9UPP1 1060 aa13.36□□□□□ -0.27
BRCA1-207ENST00000461798 CDK12Q9NYV4 1490 aaPredicted RBP13.36□□□□□ -0.27
BRCA1-207ENST00000461798 RBM6P78332 1123 aaKnown RBP13.35□□□□□ -0.27
BRCA1-207ENST00000461798 XPCQ01831 940 aaPredicted RBP13.35□□□□□ -0.27
BRCA1-207ENST00000461798 KRT28Q7Z3Y7 464 aa13.35□□□□□ -0.27
BRCA1-207ENST00000461798 TRAK1Q9UPV9 953 aa13.35□□□□□ -0.27
BRCA1-207ENST00000461798 SPATA31A3Q5VYP0 1347 aa13.35□□□□□ -0.27
BRCA1-207ENST00000461798 FMN2Q9NZ56 1722 aa13.34□□□□□ -0.27
BRCA1-207ENST00000461798 SAFB2Q14151 953 aaKnown RBP eCLIP13.34□□□□□ -0.27
BRCA1-207ENST00000461798 POLA2Q14181 598 aa13.34□□□□□ -0.27
BRCA1-207ENST00000461798 COL22A1Q8NFW1 1626 aaPredicted RBP13.34□□□□□ -0.27
BRCA1-207ENST00000461798 ANKARQ7Z5J8 1434 aa13.33□□□□□ -0.28
BRCA1-207ENST00000461798 PSME1Q06323 249 aa13.33□□□□□ -0.28
BRCA1-207ENST00000461798 USP21Q9UK80 565 aa13.32□□□□□ -0.28
BRCA1-207ENST00000461798 WASLO00401 505 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-207ENST00000461798 TRPC5Q9UL62 973 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-207ENST00000461798 SBNO1A3KN83 1393 aa13.31□□□□□ -0.28
BRCA1-207ENST00000461798 KIF1AQ12756 1690 aa13.31□□□□□ -0.28
BRCA1-207ENST00000461798 ADGRB2O60241 1585 aa13.3□□□□□ -0.28
BRCA1-207ENST00000461798 UPF1Q92900 1129 aaKnown RBP eCLIP13.3□□□□□ -0.28
BRCA1-207ENST00000461798 MINK1Q8N4C8 1332 aaPredicted RBP13.3□□□□□ -0.28
BRCA1-207ENST00000461798 EIF3AQ14152 1382 aaKnown RBP13.3□□□□□ -0.28
BRCA1-207ENST00000461798 PIP4P2Q8N4L2 257 aa13.29□□□□□ -0.28
BRCA1-207ENST00000461798 HIRIP3Q9BW71 556 aaPredicted RBP13.29□□□□□ -0.28
BRCA1-207ENST00000461798 PMFBP1Q8TBY8 1022 aa13.28□□□□□ -0.28
BRCA1-207ENST00000461798 PRR36Q9H6K5 1346 aa13.28□□□□□ -0.28
BRCA1-207ENST00000461798 ATRNO75882 1429 aa13.28□□□□□ -0.28
BRCA1-207ENST00000461798 BCL9LQ86UU0 1499 aa13.28□□□□□ -0.28
BRCA1-207ENST00000461798 AKT1S1Q96B36 256 aa13.27□□□□□ -0.29
BRCA1-207ENST00000461798 TNS3Q68CZ2 1445 aa13.27□□□□□ -0.29
BRCA1-207ENST00000461798 RGS12O14924 1447 aa13.26□□□□□ -0.29
BRCA1-207ENST00000461798 ARHGEF10O15013 1369 aa13.26□□□□□ -0.29
BRCA1-207ENST00000461798 NBPF1Q3BBV0 1214 aa13.26□□□□□ -0.29
BRCA1-207ENST00000461798 USP32Q8NFA0 1604 aa13.25□□□□□ -0.29
BRCA1-207ENST00000461798 UNC5CLQ8IV45 518 aa13.25□□□□□ -0.29
BRCA1-207ENST00000461798 L3MBTL2Q969R5 705 aa13.25□□□□□ -0.29
BRCA1-207ENST00000461798 SLIT2O94813 1529 aa13.24□□□□□ -0.29
BRCA1-207ENST00000461798 TULP4Q9NRJ4 1543 aa13.24□□□□□ -0.29
BRCA1-207ENST00000461798 GPRASP1Q5JY77 1395 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 779.2 ms