RNA–Protein interactions for RNA: ENST00000461766.1

CDHR3-202, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-202ENST00000461766 KIF21AQ7Z4S6 1674 aa6.96□□□□□ -1.3
CDHR3-202ENST00000461766 ZBED9Q6R2W3 1325 aa6.96□□□□□ -1.3
CDHR3-202ENST00000461766 KDM5BQ9UGL1 1544 aa6.96□□□□□ -1.3
CDHR3-202ENST00000461766 PHLDB1Q86UU1 1377 aa6.95□□□□□ -1.3
CDHR3-202ENST00000461766 HFM1A2PYH4 1435 aa6.95□□□□□ -1.3
CDHR3-202ENST00000461766 EYA1Q99502 592 aa6.95□□□□□ -1.3
CDHR3-202ENST00000461766 KRTAP3-3Q9BYR6 98 aa6.95□□□□□ -1.3
CDHR3-202ENST00000461766 KRTAP3-2Q9BYR7 98 aa6.95□□□□□ -1.3
CDHR3-202ENST00000461766 GOPCQ9HD26 462 aa6.95□□□□□ -1.3
CDHR3-202ENST00000461766 CTTNBP2Q8WZ74 1663 aa6.95□□□□□ -1.3
CDHR3-202ENST00000461766 CADPSQ9ULU8 1353 aa6.95□□□□□ -1.3
CDHR3-202ENST00000461766 RCCD1A6NED2 376 aa6.94□□□□□ -1.3
CDHR3-202ENST00000461766 C3orf80F5H4A9 247 aa6.94□□□□□ -1.3
CDHR3-202ENST00000461766 ONECUT3O60422 494 aaPredicted RBP6.94□□□□□ -1.3
CDHR3-202ENST00000461766 RANGAP1P46060 587 aaPredicted RBP6.94□□□□□ -1.3
CDHR3-202ENST00000461766 PROX2Q3B8N5 592 aa6.94□□□□□ -1.3
CDHR3-202ENST00000461766 VARS2Q5ST30 1063 aaKnown RBP6.94□□□□□ -1.3
CDHR3-202ENST00000461766 NUDT18Q6ZVK8 323 aa6.94□□□□□ -1.3
CDHR3-202ENST00000461766 PACS2Q86VP3 889 aa6.94□□□□□ -1.3
CDHR3-202ENST00000461766 IPO9Q96P70 1041 aaKnown RBP6.94□□□□□ -1.3
CDHR3-202ENST00000461766 SIN3AQ96ST3 1273 aa6.94□□□□□ -1.3
CDHR3-202ENST00000461766 ZBED2Q9BTP6 218 aa6.94□□□□□ -1.3
CDHR3-202ENST00000461766 USP35Q9P2H5 1018 aa6.94□□□□□ -1.3
CDHR3-202ENST00000461766 SMG6Q86US8 1419 aaKnown RBP6.93□□□□□ -1.3
CDHR3-202ENST00000461766 DNAJB2P25686 324 aa6.93□□□□□ -1.3
CDHR3-202ENST00000461766 C14orf37Q86TY3 774 aa6.93□□□□□ -1.3
CDHR3-202ENST00000461766 TATDN2Q93075 761 aa6.93□□□□□ -1.3
CDHR3-202ENST00000461766 BEGAINQ9BUH8 593 aa6.93□□□□□ -1.3
CDHR3-202ENST00000461766 PNMA3Q9UL41 463 aa6.93□□□□□ -1.3
CDHR3-202ENST00000461766 MRC2Q9UBG0 1479 aa6.92□□□□□ -1.3
CDHR3-202ENST00000461766 SH3D19Q5HYK7 790 aa6.92□□□□□ -1.3
CDHR3-202ENST00000461766 WASHC2AQ641Q2 1341 aa6.92□□□□□ -1.3
CDHR3-202ENST00000461766 FGD6Q6ZV73 1430 aa6.92□□□□□ -1.3
CDHR3-202ENST00000461766 AKNAQ7Z591 1439 aa6.92□□□□□ -1.3
CDHR3-202ENST00000461766 CASKIN1Q8WXD9 1431 aa6.92□□□□□ -1.3
CDHR3-202ENST00000461766 FGD5Q6ZNL6 1462 aa6.92□□□□□ -1.3
CDHR3-202ENST00000461766 WDR62O43379 1518 aa6.91□□□□□ -1.3
CDHR3-202ENST00000461766 CUL7Q14999 1698 aa6.91□□□□□ -1.3
CDHR3-202ENST00000461766 SUPT6HQ7KZ85 1726 aaKnown RBP6.91□□□□□ -1.3
CDHR3-202ENST00000461766 C11orf95C9JLR9 678 aaPredicted RBP6.91□□□□□ -1.3
CDHR3-202ENST00000461766 ARHGAP33O14559 1287 aa6.91□□□□□ -1.3
CDHR3-202ENST00000461766 PSEN2P49810 448 aa6.91□□□□□ -1.3
CDHR3-202ENST00000461766 POTEEQ6S8J3 1075 aa6.91□□□□□ -1.3
CDHR3-202ENST00000461766 PBX2P40425 430 aa6.9□□□□□ -1.3
CDHR3-202ENST00000461766 IRX6P78412 446 aaPredicted RBP6.9□□□□□ -1.3
CDHR3-202ENST00000461766 FAM50AQ14320 339 aaKnown RBP6.9□□□□□ -1.3
CDHR3-202ENST00000461766 SLC4A5Q9BY07 1137 aa6.9□□□□□ -1.3
CDHR3-202ENST00000461766 RSPH6AQ9H0K4 717 aa6.9□□□□□ -1.3
CDHR3-202ENST00000461766 TMEM134Q9H6X4 195 aa6.9□□□□□ -1.3
CDHR3-202ENST00000461766 RNF123Q5XPI4 1314 aa6.9□□□□□ -1.3
CDHR3-202ENST00000461766 NCOA1Q15788 1441 aa6.9□□□□□ -1.31
CDHR3-202ENST00000461766 FMN1Q68DA7 1419 aa6.9□□□□□ -1.31
CDHR3-202ENST00000461766 SMAPO00193 183 aa6.89□□□□□ -1.31
CDHR3-202ENST00000461766 SULF1Q8IWU6 871 aa6.89□□□□□ -1.31
CDHR3-202ENST00000461766 UBE2Q2Q8WVN8 375 aa6.89□□□□□ -1.31
CDHR3-202ENST00000461766 PCMTD1Q96MG8 357 aaPredicted RBP6.89□□□□□ -1.31
CDHR3-202ENST00000461766 KIAA1468Q9P260 1216 aa6.89□□□□□ -1.31
CDHR3-202ENST00000461766 CFTRP13569 1480 aa6.89□□□□□ -1.31
CDHR3-202ENST00000461766 EHBP1L1Q8N3D4 1523 aa6.88□□□□□ -1.31
CDHR3-202ENST00000461766 WASHC2CQ9Y4E1 1318 aa6.88□□□□□ -1.31
CDHR3-202ENST00000461766 PPM1GO15355 546 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-202ENST00000461766 DMRTA1Q5VZB9 504 aa6.88□□□□□ -1.31
CDHR3-202ENST00000461766 B4GALNT3Q6L9W6 998 aa6.88□□□□□ -1.31
CDHR3-202ENST00000461766 ZNF687Q8N1G0 1237 aa6.88□□□□□ -1.31
CDHR3-202ENST00000461766 RABGEF1Q9UJ41 708 aa6.88□□□□□ -1.31
CDHR3-202ENST00000461766 AXIN2Q9Y2T1 843 aa6.88□□□□□ -1.31
CDHR3-202ENST00000461766 NAIPQ13075 1403 aa6.87□□□□□ -1.31
CDHR3-202ENST00000461766 CCDC7Q96M83 1385 aa6.87□□□□□ -1.31
CDHR3-202ENST00000461766 CD46P15529 392 aa6.87□□□□□ -1.31
CDHR3-202ENST00000461766 EIF4G2P78344 907 aaKnown RBP eCLIP6.87□□□□□ -1.31
CDHR3-202ENST00000461766 SKIV2LQ15477 1246 aaKnown RBP6.87□□□□□ -1.31
CDHR3-202ENST00000461766 IGF1RP08069 1367 aa6.86□□□□□ -1.31
CDHR3-202ENST00000461766 CARMIL1Q5VZK9 1371 aa6.86□□□□□ -1.31
CDHR3-202ENST00000461766 POTEB3A0JP26 581 aa6.86□□□□□ -1.31
CDHR3-202ENST00000461766 DDX11L8A8MPP1 907 aa6.86□□□□□ -1.31
CDHR3-202ENST00000461766 DIXDC1Q155Q3 683 aa6.86□□□□□ -1.31
CDHR3-202ENST00000461766 MYSM1Q5VVJ2 828 aa6.86□□□□□ -1.31
CDHR3-202ENST00000461766 POTEBQ6S5H4 581 aa6.86□□□□□ -1.31
CDHR3-202ENST00000461766 CCDC136Q96JN2 1154 aa6.86□□□□□ -1.31
CDHR3-202ENST00000461766 PRKRIP1Q9H875 184 aaPredicted RBP6.86□□□□□ -1.31
CDHR3-202ENST00000461766 SALL2Q9Y467 1007 aaPredicted RBP6.86□□□□□ -1.31
CDHR3-202ENST00000461766 TCOF1Q13428 1488 aaKnown RBP6.85□□□□□ -1.31
CDHR3-202ENST00000461766 MYOM3Q5VTT5 1437 aa6.85□□□□□ -1.31
CDHR3-202ENST00000461766 LRRIQ1Q96JM4 1722 aa6.85□□□□□ -1.31
CDHR3-202ENST00000461766 TCERG1O14776 1098 aaKnown RBP6.85□□□□□ -1.31
CDHR3-202ENST00000461766 HSPA5P11021 654 aaKnown RBP6.85□□□□□ -1.31
CDHR3-202ENST00000461766 HIRIP3Q9BW71 556 aaPredicted RBP6.85□□□□□ -1.31
CDHR3-202ENST00000461766 TBC1D2Q9BYX2 928 aa6.85□□□□□ -1.31
CDHR3-202ENST00000461766 MRS2Q9HD23 443 aa6.85□□□□□ -1.31
CDHR3-202ENST00000461766 SEPT9Q9UHD8 586 aaPredicted RBP6.85□□□□□ -1.31
CDHR3-202ENST00000461766 NUDCQ9Y266 331 aa6.85□□□□□ -1.31
CDHR3-202ENST00000461766 VPS9D1Q9Y2B5 631 aa6.85□□□□□ -1.31
CDHR3-202ENST00000461766 SAMD9Q5K651 1589 aa6.85□□□□□ -1.31
CDHR3-202ENST00000461766 SNAPC4Q5SXM2 1469 aa6.85□□□□□ -1.31
CDHR3-202ENST00000461766 CLK2P49760 499 aaKnown RBP6.84□□□□□ -1.31
CDHR3-202ENST00000461766 ARHGEF11O15085 1522 aa6.84□□□□□ -1.31
CDHR3-202ENST00000461766 MIA2Q96PC5 1412 aa6.84□□□□□ -1.32
CDHR3-202ENST00000461766 UGGT2Q9NYU1 1516 aa6.83□□□□□ -1.32
CDHR3-202ENST00000461766 FAM98CQ17RN3 349 aaKnown RBP6.83□□□□□ -1.32
CDHR3-202ENST00000461766 SWT1Q5T5J6 900 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms