RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 PUS10Q3MIT2 529 aaKnown RBP6.25□□□□□ -1.41
HDAC6-212ENST00000461608 KRI1Q8N9T8 703 aaKnown RBP6.25□□□□□ -1.41
HDAC6-212ENST00000461608 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.24□□□□□ -1.41
HDAC6-212ENST00000461608 AVPP01185 164 aa6.24□□□□□ -1.41
HDAC6-212ENST00000461608 KIFC2Q96AC6 838 aa6.24□□□□□ -1.41
HDAC6-212ENST00000461608 SPSB2Q99619 263 aa6.24□□□□□ -1.41
HDAC6-212ENST00000461608 TERTO14746 1132 aaKnown RBP6.23□□□□□ -1.41
HDAC6-212ENST00000461608 NFX1Q12986 1120 aaKnown RBP6.23□□□□□ -1.41
HDAC6-212ENST00000461608 MAP2K5Q13163 448 aa6.23□□□□□ -1.41
HDAC6-212ENST00000461608 HIC1Q14526 733 aa6.23□□□□□ -1.41
HDAC6-212ENST00000461608 GNPATO15228 680 aa6.22□□□□□ -1.41
HDAC6-212ENST00000461608 SMCPP49901 116 aaPredicted RBP6.22□□□□□ -1.41
HDAC6-212ENST00000461608 MINK1Q8N4C8 1332 aaPredicted RBP6.22□□□□□ -1.41
HDAC6-212ENST00000461608 SCUBE3Q8IX30 993 aa6.21□□□□□ -1.42
HDAC6-212ENST00000461608 PKD2L1Q9P0L9 805 aa6.21□□□□□ -1.42
HDAC6-212ENST00000461608 OATP04181 439 aa6.2□□□□□ -1.42
HDAC6-212ENST00000461608 DACH1Q9UI36 760 aa6.2□□□□□ -1.42
HDAC6-212ENST00000461608 ATP13A2Q9NQ11 1180 aa6.19□□□□□ -1.42
HDAC6-212ENST00000461608 TOR4AQ9NXH8 423 aa6.19□□□□□ -1.42
HDAC6-212ENST00000461608 TRIM66O15016 1216 aa6.18□□□□□ -1.42
HDAC6-212ENST00000461608 FUT2Q10981 343 aa6.18□□□□□ -1.42
HDAC6-212ENST00000461608 MORN1Q5T089 497 aa6.18□□□□□ -1.42
HDAC6-212ENST00000461608 ZSCAN1Q8NBB4 408 aa6.18□□□□□ -1.42
HDAC6-212ENST00000461608 THAP11Q96EK4 314 aa6.18□□□□□ -1.42
HDAC6-212ENST00000461608 PRDM9Q9NQV7 894 aa6.18□□□□□ -1.42
HDAC6-212ENST00000461608 FCF1Q9Y324 198 aaKnown RBP6.18□□□□□ -1.42
HDAC6-212ENST00000461608 DDX11L8A8MPP1 907 aa6.17□□□□□ -1.42
HDAC6-212ENST00000461608 PDE4DQ08499 809 aa6.17□□□□□ -1.42
HDAC6-212ENST00000461608 AMHR2Q16671 573 aa6.17□□□□□ -1.42
HDAC6-212ENST00000461608 SNIP1Q8TAD8 396 aaKnown RBP6.17□□□□□ -1.42
HDAC6-212ENST00000461608 IRF7Q92985 503 aa6.17□□□□□ -1.42
HDAC6-212ENST00000461608 TRIM47Q96LD4 638 aa6.17□□□□□ -1.42
HDAC6-212ENST00000461608 FMNL1O95466 1100 aaPredicted RBP6.16□□□□□ -1.42
HDAC6-212ENST00000461608 FAM160A2Q8N612 972 aaPredicted RBP6.16□□□□□ -1.42
HDAC6-212ENST00000461608 RDH13Q8NBN7 331 aa6.16□□□□□ -1.42
HDAC6-212ENST00000461608 CCDC102AQ96A19 550 aa6.16□□□□□ -1.42
HDAC6-212ENST00000461608 REPIN1Q9BWE0 567 aaKnown RBP6.16□□□□□ -1.42
HDAC6-212ENST00000461608 KDM4CQ9H3R0 1056 aa6.16□□□□□ -1.42
HDAC6-212ENST00000461608 IRF6O14896 467 aa6.15□□□□□ -1.42
HDAC6-212ENST00000461608 DDRGK1Q96HY6 314 aa6.15□□□□□ -1.42
HDAC6-212ENST00000461608 SLC27A5Q9Y2P5 690 aa6.15□□□□□ -1.42
HDAC6-212ENST00000461608 GCGRP47871 477 aa6.14□□□□□ -1.43
HDAC6-212ENST00000461608 RNF19BQ6ZMZ0 732 aa6.14□□□□□ -1.43
HDAC6-212ENST00000461608 SNRPBP14678 240 aaKnown RBP6.13□□□□□ -1.43
HDAC6-212ENST00000461608 HLA-CQ95604 372 aa6.13□□□□□ -1.43
HDAC6-212ENST00000461608 NXF1Q9UBU9 619 aaKnown RBP6.13□□□□□ -1.43
HDAC6-212ENST00000461608 TIMELESSQ9UNS1 1208 aa6.13□□□□□ -1.43
HDAC6-212ENST00000461608 WNT7AO00755 349 aa6.12□□□□□ -1.43
HDAC6-212ENST00000461608 GRIPAP1Q4V328 841 aa6.12□□□□□ -1.43
HDAC6-212ENST00000461608 NPAS3Q8IXF0 933 aa6.12□□□□□ -1.43
HDAC6-212ENST00000461608 GPBP1L1Q9HC44 474 aaPredicted RBP6.12□□□□□ -1.43
HDAC6-212ENST00000461608 ATP6V1AP38606 617 aa6.11□□□□□ -1.43
HDAC6-212ENST00000461608 BRICD5Q6PL45 260 aa6.11□□□□□ -1.43
HDAC6-212ENST00000461608 TTLL12Q14166 644 aaPredicted RBP6.1□□□□□ -1.43
HDAC6-212ENST00000461608 C14orf37Q86TY3 774 aa6.1□□□□□ -1.43
HDAC6-212ENST00000461608 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.43
HDAC6-212ENST00000461608 CD46P15529 392 aa6.09□□□□□ -1.43
HDAC6-212ENST00000461608 PARP9Q8IXQ6 854 aa6.09□□□□□ -1.43
HDAC6-212ENST00000461608 KRTAP4-6Q9BYQ5 205 aa6.09□□□□□ -1.43
HDAC6-212ENST00000461608 SMPD1P17405 629 aa6.08□□□□□ -1.44
HDAC6-212ENST00000461608 CLCN1P35523 988 aa6.08□□□□□ -1.44
HDAC6-212ENST00000461608 SUZ12Q15022 739 aaKnown RBP6.08□□□□□ -1.44
HDAC6-212ENST00000461608 GOPCQ9HD26 462 aa6.08□□□□□ -1.44
HDAC6-212ENST00000461608 GMPRP36959 345 aa6.07□□□□□ -1.44
HDAC6-212ENST00000461608 MDM2Q00987 491 aaPredicted RBP6.07□□□□□ -1.44
HDAC6-212ENST00000461608 GUCA2AQ02747 115 aa6.07□□□□□ -1.44
HDAC6-212ENST00000461608 TRIM32Q13049 653 aa6.07□□□□□ -1.44
HDAC6-212ENST00000461608 SULF1Q8IWU6 871 aa6.07□□□□□ -1.44
HDAC6-212ENST00000461608 MRGPRX2Q96LB1 330 aa6.07□□□□□ -1.44
HDAC6-212ENST00000461608 Q3C1V9 767 aa6.06□□□□□ -1.44
HDAC6-212ENST00000461608 IL27Q8NEV9 243 aa6.06□□□□□ -1.44
HDAC6-212ENST00000461608 GPCPD1Q9NPB8 672 aa6.06□□□□□ -1.44
HDAC6-212ENST00000461608 SALL2Q9Y467 1007 aaPredicted RBP6.06□□□□□ -1.44
HDAC6-212ENST00000461608 J3QL48 77 aa6.05□□□□□ -1.44
HDAC6-212ENST00000461608 MSS51Q4VC12 460 aa6.05□□□□□ -1.44
HDAC6-212ENST00000461608 GIGYF2Q6Y7W6 1299 aaKnown RBP6.05□□□□□ -1.44
HDAC6-212ENST00000461608 WASF2Q9Y6W5 498 aa6.05□□□□□ -1.44
HDAC6-212ENST00000461608 RNF225M0QZC1 329 aaPredicted RBP6.04□□□□□ -1.44
HDAC6-212ENST00000461608 MMP16P51512 607 aa6.04□□□□□ -1.44
HDAC6-212ENST00000461608 KDM4AO75164 1064 aa6.03□□□□□ -1.44
HDAC6-212ENST00000461608 ALDH1A1P00352 501 aa6.03□□□□□ -1.44
HDAC6-212ENST00000461608 CCDC24Q8N4L8 307 aa6.03□□□□□ -1.44
HDAC6-212ENST00000461608 SYMPKQ92797 1274 aaKnown RBP6.03□□□□□ -1.44
HDAC6-212ENST00000461608 HPS1Q92902 700 aa6.03□□□□□ -1.44
HDAC6-212ENST00000461608 FAM117AQ9C073 453 aa6.03□□□□□ -1.44
HDAC6-212ENST00000461608 HOXA2O43364 376 aa6.02□□□□□ -1.45
HDAC6-212ENST00000461608 DXOO77932 396 aaKnown RBP6.02□□□□□ -1.45
HDAC6-212ENST00000461608 PLEKHG3A1L390 1219 aa6.01□□□□□ -1.45
HDAC6-212ENST00000461608 CAPN5O15484 640 aaPredicted RBP6.01□□□□□ -1.45
HDAC6-212ENST00000461608 WNT7BP56706 349 aa6.01□□□□□ -1.45
HDAC6-212ENST00000461608 SKOR1P84550 965 aa6.01□□□□□ -1.45
HDAC6-212ENST00000461608 DIXDC1Q155Q3 683 aa6.01□□□□□ -1.45
HDAC6-212ENST00000461608 RSPH6AQ9H0K4 717 aa6.01□□□□□ -1.45
HDAC6-212ENST00000461608 FAM217BQ9NTX9 383 aaPredicted RBP6.01□□□□□ -1.45
HDAC6-212ENST00000461608 H3BM21 787 aa6□□□□□ -1.45
HDAC6-212ENST00000461608 FLIIQ13045 1269 aa6□□□□□ -1.45
HDAC6-212ENST00000461608 SCARF1Q14162 830 aa6□□□□□ -1.45
HDAC6-212ENST00000461608 SH3D19Q5HYK7 790 aa6□□□□□ -1.45
HDAC6-212ENST00000461608 RC3H1Q5TC82 1133 aaKnown RBP6□□□□□ -1.45
HDAC6-212ENST00000461608 PCMTD1Q96MG8 357 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms