RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 NUTM2FA1L443 756 aa10.37□□□□□ -0.75
CCT4-203ENST00000461540 VEGFBP49765 207 aa10.37□□□□□ -0.75
CCT4-203ENST00000461540 RDH13Q8NBN7 331 aa10.37□□□□□ -0.75
CCT4-203ENST00000461540 SPRYD3Q8NCJ5 442 aa10.37□□□□□ -0.75
CCT4-203ENST00000461540 PXYLP1Q8TE99 480 aa10.37□□□□□ -0.75
CCT4-203ENST00000461540 H3BM21 787 aa10.36□□□□□ -0.75
CCT4-203ENST00000461540 FECHP22830 423 aa10.36□□□□□ -0.75
CCT4-203ENST00000461540 MSS51Q4VC12 460 aa10.35□□□□□ -0.75
CCT4-203ENST00000461540 BRICD5Q6PL45 260 aa10.34□□□□□ -0.75
CCT4-203ENST00000461540 ERBB4Q15303 1308 aa10.32□□□□□ -0.76
CCT4-203ENST00000461540 FCHSD2O94868 740 aa10.31□□□□□ -0.76
CCT4-203ENST00000461540 KCTD17Q8N5Z5 321 aa10.31□□□□□ -0.76
CCT4-203ENST00000461540 RC3H1Q5TC82 1133 aaKnown RBP10.3□□□□□ -0.76
CCT4-203ENST00000461540 BMP1P13497 986 aa10.29□□□□□ -0.76
CCT4-203ENST00000461540 RNF19BQ6ZMZ0 732 aa10.29□□□□□ -0.76
CCT4-203ENST00000461540 METTL3Q86U44 580 aaKnown RBP10.29□□□□□ -0.76
CCT4-203ENST00000461540 DDX11L8A8MPP1 907 aa10.28□□□□□ -0.76
CCT4-203ENST00000461540 ALDH1A1P00352 501 aa10.28□□□□□ -0.76
CCT4-203ENST00000461540 DAXXQ9UER7 740 aaPredicted RBP10.28□□□□□ -0.76
CCT4-203ENST00000461540 CAPN5O15484 640 aaPredicted RBP10.26□□□□□ -0.77
CCT4-203ENST00000461540 GCGRP47871 477 aa10.26□□□□□ -0.77
CCT4-203ENST00000461540 KCNMA1Q12791 1236 aa10.26□□□□□ -0.77
CCT4-203ENST00000461540 TRIM46Q7Z4K8 759 aa10.26□□□□□ -0.77
CCT4-203ENST00000461540 MMP16P51512 607 aa10.25□□□□□ -0.77
CCT4-203ENST00000461540 WNT7BP56706 349 aa10.25□□□□□ -0.77
CCT4-203ENST00000461540 GRIPAP1Q4V328 841 aa10.25□□□□□ -0.77
CCT4-203ENST00000461540 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.25□□□□□ -0.77
CCT4-203ENST00000461540 ARHGEF1Q92888 912 aaKnown RBP10.24□□□□□ -0.77
CCT4-203ENST00000461540 Q3C1V9 767 aa10.23□□□□□ -0.77
CCT4-203ENST00000461540 SKOR1P84550 965 aa10.22□□□□□ -0.77
CCT4-203ENST00000461540 SULF1Q8IWU6 871 aa10.22□□□□□ -0.77
CCT4-203ENST00000461540 CCDC24Q8N4L8 307 aa10.22□□□□□ -0.77
CCT4-203ENST00000461540 WASF2Q9Y6W5 498 aa10.21□□□□□ -0.77
CCT4-203ENST00000461540 TMEM151AQ8N4L1 468 aa10.2□□□□□ -0.78
CCT4-203ENST00000461540 DXOO77932 396 aaKnown RBP10.18□□□□□ -0.78
CCT4-203ENST00000461540 GSK3AP49840 483 aa10.18□□□□□ -0.78
CCT4-203ENST00000461540 HIC1Q14526 733 aa10.18□□□□□ -0.78
CCT4-203ENST00000461540 ZFP42Q96MM3 310 aa10.18□□□□□ -0.78
CCT4-203ENST00000461540 GDF11O95390 407 aa10.17□□□□□ -0.78
CCT4-203ENST00000461540 USB1Q9BQ65 265 aaKnown RBP10.17□□□□□ -0.78
CCT4-203ENST00000461540 VSIG8P0DPA2 414 aa10.15□□□□□ -0.78
CCT4-203ENST00000461540 CFAP44Q96MT7 982 aa10.15□□□□□ -0.78
CCT4-203ENST00000461540 SIAH2O43255 324 aa10.14□□□□□ -0.79
CCT4-203ENST00000461540 RASSF7Q02833 373 aa10.14□□□□□ -0.79
CCT4-203ENST00000461540 EHBP1Q8NDI1 1231 aa10.14□□□□□ -0.79
CCT4-203ENST00000461540 NLRP7Q8WX94 980 aa10.13□□□□□ -0.79
CCT4-203ENST00000461540 RNF225M0QZC1 329 aaPredicted RBP10.12□□□□□ -0.79
CCT4-203ENST00000461540 PAXIP1Q6ZW49 1069 aaPredicted RBP10.12□□□□□ -0.79
CCT4-203ENST00000461540 SCARF1Q14162 830 aa10.1□□□□□ -0.79
CCT4-203ENST00000461540 KCNV2Q8TDN2 545 aa10.09□□□□□ -0.79
CCT4-203ENST00000461540 MRPL14Q6P1L8 145 aaKnown RBP10.07□□□□□ -0.8
CCT4-203ENST00000461540 GNPATO15228 680 aa10.06□□□□□ -0.8
CCT4-203ENST00000461540 SOBPA7XYQ1 873 aa10.05□□□□□ -0.8
CCT4-203ENST00000461540 PURBQ96QR8 312 aaKnown RBP10.05□□□□□ -0.8
CCT4-203ENST00000461540 GPAT2Q6NUI2 795 aa10.03□□□□□ -0.8
CCT4-203ENST00000461540 ADAMTS8Q9UP79 889 aa10.02□□□□□ -0.81
CCT4-203ENST00000461540 KDM4AO75164 1064 aa10.01□□□□□ -0.81
CCT4-203ENST00000461540 JUNDP17535 347 aa10.01□□□□□ -0.81
CCT4-203ENST00000461540 MAN1A2O60476 641 aa10□□□□□ -0.81
CCT4-203ENST00000461540 IGHA1P01876 353 aa10□□□□□ -0.81
CCT4-203ENST00000461540 PHOX2BQ99453 314 aa10□□□□□ -0.81
CCT4-203ENST00000461540 NUDT12Q9BQG2 462 aa10□□□□□ -0.81
CCT4-203ENST00000461540 PLEKHG3A1L390 1219 aa9.99□□□□□ -0.81
CCT4-203ENST00000461540 SEMA3EO15041 775 aa9.99□□□□□ -0.81
CCT4-203ENST00000461540 SH3BP2P78314 561 aa9.99□□□□□ -0.81
CCT4-203ENST00000461540 NNTQ13423 1086 aa9.99□□□□□ -0.81
CCT4-203ENST00000461540 PTCRAQ6ISU1 281 aaPredicted RBP9.99□□□□□ -0.81
CCT4-203ENST00000461540 PPFIA3O75145 1194 aa9.98□□□□□ -0.81
CCT4-203ENST00000461540 DNMT3AQ9Y6K1 912 aaPredicted RBP9.98□□□□□ -0.81
CCT4-203ENST00000461540 TLL2Q9Y6L7 1015 aa9.98□□□□□ -0.81
CCT4-203ENST00000461540 ADH1CP00326 375 aa9.97□□□□□ -0.81
CCT4-203ENST00000461540 CD46P15529 392 aa9.97□□□□□ -0.81
CCT4-203ENST00000461540 WDR4P57081 412 aaKnown RBP9.97□□□□□ -0.81
CCT4-203ENST00000461540 XP32Q5T750 250 aa9.97□□□□□ -0.81
CCT4-203ENST00000461540 USP46P62068 366 aa9.96□□□□□ -0.82
CCT4-203ENST00000461540 HLA-CQ95604 372 aa9.96□□□□□ -0.82
CCT4-203ENST00000461540 TIMP2P16035 220 aa9.95□□□□□ -0.82
CCT4-203ENST00000461540 RBM26Q5T8P6 1007 aaKnown RBP9.95□□□□□ -0.82
CCT4-203ENST00000461540 FOXK2Q01167 660 aa9.93□□□□□ -0.82
CCT4-203ENST00000461540 CNTNAP3BQ96NU0 1288 aa9.93□□□□□ -0.82
CCT4-203ENST00000461540 CNTNAP3Q9BZ76 1288 aa9.93□□□□□ -0.82
CCT4-203ENST00000461540 IRS1P35568 1242 aa9.92□□□□□ -0.82
CCT4-203ENST00000461540 MPNDQ8N594 471 aa9.91□□□□□ -0.82
CCT4-203ENST00000461540 HOXA2O43364 376 aa9.9□□□□□ -0.82
CCT4-203ENST00000461540 VARSP26640 1264 aaKnown RBP9.9□□□□□ -0.82
CCT4-203ENST00000461540 KRT76Q01546 638 aa9.9□□□□□ -0.82
CCT4-203ENST00000461540 C6orf118Q5T5N4 469 aa9.9□□□□□ -0.82
CCT4-203ENST00000461540 P3H3Q8IVL6 736 aa9.9□□□□□ -0.82
CCT4-203ENST00000461540 SVOPQ8N4V2 548 aa9.9□□□□□ -0.82
CCT4-203ENST00000461540 SYMPKQ92797 1274 aaKnown RBP9.9□□□□□ -0.82
CCT4-203ENST00000461540 GPR37O15354 613 aa9.89□□□□□ -0.83
CCT4-203ENST00000461540 CCNYL3P0C7X3 344 aa9.89□□□□□ -0.83
CCT4-203ENST00000461540 LINC01559Q495D7 138 aa9.89□□□□□ -0.83
CCT4-203ENST00000461540 SMYD5Q6GMV2 418 aa9.89□□□□□ -0.83
CCT4-203ENST00000461540 RETREG3Q86VR2 466 aa9.89□□□□□ -0.83
CCT4-203ENST00000461540 UNC93B1Q9H1C4 597 aa9.88□□□□□ -0.83
CCT4-203ENST00000461540 GUCA2AQ02747 115 aa9.87□□□□□ -0.83
CCT4-203ENST00000461540 ZNF385CQ66K41 422 aaPredicted RBP9.87□□□□□ -0.83
CCT4-203ENST00000461540 KANK3Q6NY19 840 aa9.87□□□□□ -0.83
CCT4-203ENST00000461540 BAP1Q92560 729 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms