RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 SAFB2Q14151 953 aaKnown RBP eCLIP26.92■■□□□ 1.95e-8■■■□□ 18
CCM2-203ENST00000461377 CABP2Q9NPB3 220 aa26.92■■□□□ 1.9
CCM2-203ENST00000461377 NINLQ9Y2I6 1382 aa26.92■■□□□ 1.9
CCM2-203ENST00000461377 PRAM1Q96QH2 718 aa26.91■■□□□ 1.9
CCM2-203ENST00000461377 SETD1AO15047 1707 aaKnown RBP26.91■■□□□ 1.9
CCM2-203ENST00000461377 DLC1Q96QB1 1528 aa26.9■■□□□ 1.9
CCM2-203ENST00000461377 POLR3AO14802 1390 aaPredicted RBP26.9■■□□□ 1.9
CCM2-203ENST00000461377 CGNL1Q0VF96 1302 aa26.89■■□□□ 1.89
CCM2-203ENST00000461377 MORC1Q86VD1 984 aa26.88■■□□□ 1.89
CCM2-203ENST00000461377 POGKQ9P215 609 aa26.88■■□□□ 1.89
CCM2-203ENST00000461377 CDCA7LQ96GN5 454 aa26.88■■□□□ 1.89
CCM2-203ENST00000461377 ATAD2Q6PL18 1390 aa26.87■■□□□ 1.89
CCM2-203ENST00000461377 TNRQ92752 1358 aa26.87■■□□□ 1.89
CCM2-203ENST00000461377 NSD2O96028 1365 aa26.87■■□□□ 1.89
CCM2-203ENST00000461377 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.86■■□□□ 1.89
CCM2-203ENST00000461377 NRXN3Q9Y4C0 1643 aa26.86■■□□□ 1.89
CCM2-203ENST00000461377 MINK1Q8N4C8 1332 aaPredicted RBP26.85■■□□□ 1.89
CCM2-203ENST00000461377 SRPK2P78362 688 aaKnown RBP26.84■■□□□ 1.89
CCM2-203ENST00000461377 RCAN3Q9UKA8 241 aa26.84■■□□□ 1.89
CCM2-203ENST00000461377 PLEKHH1Q9ULM0 1364 aa26.84■■□□□ 1.89
CCM2-203ENST00000461377 ZNF521Q96K83 1311 aa26.82■■□□□ 1.88
CCM2-203ENST00000461377 A0A1W2PP64 1363 aa26.82■■□□□ 1.88
CCM2-203ENST00000461377 ABCC11Q96J66 1382 aa26.81■■□□□ 1.88
CCM2-203ENST00000461377 RRP1P56182 461 aaKnown RBP26.81■■□□□ 1.88
CCM2-203ENST00000461377 CD163L1Q9NR16 1453 aa26.78■■□□□ 1.88
CCM2-203ENST00000461377 B4GALNT3Q6L9W6 998 aa26.78■■□□□ 1.88
CCM2-203ENST00000461377 SHPRHQ149N8 1683 aa26.78■■□□□ 1.88
CCM2-203ENST00000461377 UBR1Q8IWV7 1749 aa26.77■■□□□ 1.88
CCM2-203ENST00000461377 HDGFP51858 240 aaKnown RBP26.77■■□□□ 1.88
CCM2-203ENST00000461377 CDK19Q9BWU1 502 aa26.77■■□□□ 1.88
CCM2-203ENST00000461377 CCDC146Q8IYE0 955 aa26.76■■□□□ 1.87
CCM2-203ENST00000461377 TMEM2Q9UHN6 1383 aa26.75■■□□□ 1.87
CCM2-203ENST00000461377 TNNT2P45379 298 aaPredicted RBP26.75■■□□□ 1.87
CCM2-203ENST00000461377 TERF2IPQ9NYB0 399 aa26.75■■□□□ 1.87
CCM2-203ENST00000461377 METP08581 1390 aa26.74■■□□□ 1.87
CCM2-203ENST00000461377 WAPLQ7Z5K2 1190 aa26.72■■□□□ 1.87
CCM2-203ENST00000461377 NGEFQ8N5V2 710 aa26.72■■□□□ 1.87
CCM2-203ENST00000461377 GOLGA2Q08379 1002 aa26.71■■□□□ 1.87
CCM2-203ENST00000461377 MED14O60244 1454 aa26.71■■□□□ 1.87
CCM2-203ENST00000461377 NLRP1Q9C000 1473 aa26.71■■□□□ 1.87
CCM2-203ENST00000461377 KNDC1Q76NI1 1749 aa26.71■■□□□ 1.87
CCM2-203ENST00000461377 APAF1O14727 1248 aa26.71■■□□□ 1.87
CCM2-203ENST00000461377 TECPR2O15040 1411 aa26.7■■□□□ 1.87
CCM2-203ENST00000461377 MTHFSP49914 203 aa26.7■■□□□ 1.86
CCM2-203ENST00000461377 DUSP27Q5VZP5 1158 aa26.7■■□□□ 1.86
CCM2-203ENST00000461377 SIRT1Q96EB6 747 aa26.68■■□□□ 1.86
CCM2-203ENST00000461377 CFAP53Q96M91 514 aa26.68■■□□□ 1.86
CCM2-203ENST00000461377 FAM135BQ49AJ0 1406 aa26.68■■□□□ 1.86
CCM2-203ENST00000461377 ANKRD26Q9UPS8 1709 aa26.68■■□□□ 1.86
CCM2-203ENST00000461377 HDGFL2Q7Z4V5 671 aaPredicted RBP26.67■■□□□ 1.86
CCM2-203ENST00000461377 CPS1P31327 1500 aa26.66■■□□□ 1.86
CCM2-203ENST00000461377 SLFN5Q08AF3 891 aa26.66■■□□□ 1.86
CCM2-203ENST00000461377 CABP1Q9NZU7 370 aa26.66■■□□□ 1.86
CCM2-203ENST00000461377 ATP7BP35670 1465 aa26.65■■□□□ 1.86
CCM2-203ENST00000461377 TRMT2AQ8IZ69 625 aaKnown RBP26.65■■□□□ 1.86
CCM2-203ENST00000461377 FYB1O15117 783 aa26.64■■□□□ 1.85
CCM2-203ENST00000461377 ADAMTS13Q76LX8 1427 aa26.63■■□□□ 1.85
CCM2-203ENST00000461377 CCDC136Q96JN2 1154 aa26.63■■□□□ 1.85
CCM2-203ENST00000461377 GGNBP2Q9H3C7 697 aa26.63■■□□□ 1.85
CCM2-203ENST00000461377 C3P01024 1663 aa26.63■■□□□ 1.85
CCM2-203ENST00000461377 PLEKHG1Q9ULL1 1385 aa26.62■■□□□ 1.85
CCM2-203ENST00000461377 IQSEC2Q5JU85 1478 aa26.62■■□□□ 1.85
CCM2-203ENST00000461377 CEBPAP49715 358 aaPredicted RBP26.62■■□□□ 1.85
CCM2-203ENST00000461377 WASLO00401 505 aaPredicted RBP26.61■■□□□ 1.85
CCM2-203ENST00000461377 TXNDC2Q86VQ3 553 aa26.61■■□□□ 1.85
CCM2-203ENST00000461377 RUNDC1Q96C34 613 aa26.61■■□□□ 1.85
CCM2-203ENST00000461377 EXOC6Q8TAG9 804 aa26.59■■□□□ 1.85
CCM2-203ENST00000461377 FER1L4A9Z1Z3 1794 aa26.59■■□□□ 1.85
CCM2-203ENST00000461377 KIF20BQ96Q89 1820 aa26.59■■□□□ 1.85
CCM2-203ENST00000461377 COL3A1P02461 1466 aaPredicted RBP26.57■■□□□ 1.84
CCM2-203ENST00000461377 E9PSI1 815 aa26.57■■□□□ 1.84
CCM2-203ENST00000461377 LTKP29376 864 aa26.57■■□□□ 1.84
CCM2-203ENST00000461377 SPINK5Q9NQ38 1064 aaPredicted RBP26.57■■□□□ 1.84
CCM2-203ENST00000461377 SLIT1O75093 1534 aa26.56■■□□□ 1.84
CCM2-203ENST00000461377 ARHGAP23Q9P227 1491 aa26.56■■□□□ 1.84
CCM2-203ENST00000461377 CPSF1Q10570 1443 aaKnown RBP26.55■■□□□ 1.84
CCM2-203ENST00000461377 TRHP20396 242 aaPredicted RBP26.55■■□□□ 1.84
CCM2-203ENST00000461377 RBM19Q9Y4C8 960 aaKnown RBP26.55■■□□□ 1.84
CCM2-203ENST00000461377 NKTRP30414 1462 aaKnown RBP26.55■■□□□ 1.84
CCM2-203ENST00000461377 PPIP5K1Q6PFW1 1433 aa26.54■■□□□ 1.84
CCM2-203ENST00000461377 PLIN1O60240 522 aa26.54■■□□□ 1.84
CCM2-203ENST00000461377 WWC1Q8IX03 1113 aa26.54■■□□□ 1.84
CCM2-203ENST00000461377 ROBO2Q9HCK4 1378 aa26.53■■□□□ 1.84
CCM2-203ENST00000461377 PHF23Q9BUL5 403 aaPredicted RBP26.53■■□□□ 1.84
CCM2-203ENST00000461377 DMRT2Q9Y5R5 561 aa26.53■■□□□ 1.84
CCM2-203ENST00000461377 NCBP3Q53F19 620 aaKnown RBP26.52■■□□□ 1.84
CCM2-203ENST00000461377 TCP11L2Q8N4U5 519 aa26.52■■□□□ 1.84
CCM2-203ENST00000461377 EDC4Q6P2E9 1401 aaKnown RBP26.51■■□□□ 1.83
CCM2-203ENST00000461377 ADGRB2O60241 1585 aa26.5■■□□□ 1.83
CCM2-203ENST00000461377 CDC42BPGQ6DT37 1551 aa26.5■■□□□ 1.83
CCM2-203ENST00000461377 U2AF1L5P0DN76 240 aaPredicted RBP26.49■■□□□ 1.83
CCM2-203ENST00000461377 U2AF1Q01081 240 aaKnown RBP eCLIP26.49■■□□□ 1.83
CCM2-203ENST00000461377 NUDT16Q96DE0 195 aaKnown RBP26.49■■□□□ 1.83
CCM2-203ENST00000461377 EID1Q9Y6B2 187 aa26.49■■□□□ 1.83
CCM2-203ENST00000461377 PNPLA6Q8IY17 1366 aa26.49■■□□□ 1.83
CCM2-203ENST00000461377 CCDC27Q2M243 656 aa26.48■■□□□ 1.83
CCM2-203ENST00000461377 CCDC61Q9Y6R9 512 aa26.47■■□□□ 1.83
CCM2-203ENST00000461377 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.46■■□□□ 1.83
CCM2-203ENST00000461377 CRBNQ96SW2 442 aa26.46■■□□□ 1.83
CCM2-203ENST00000461377 RRP7AQ9Y3A4 280 aaKnown RBP26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms