RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 EHBP1L1Q8N3D4 1523 aa10.87□□□□□ -0.67
NUP50-212ENST00000461194 PREX2Q70Z35 1606 aa10.87□□□□□ -0.67
NUP50-212ENST00000461194 ZNF518AQ6AHZ1 1483 aa10.87□□□□□ -0.67
NUP50-212ENST00000461194 YEATS2Q9ULM3 1422 aa10.86□□□□□ -0.67
NUP50-212ENST00000461194 POTEB3A0JP26 581 aa10.86□□□□□ -0.67
NUP50-212ENST00000461194 GNPATO15228 680 aa10.86□□□□□ -0.67
NUP50-212ENST00000461194 HIC1Q14526 733 aa10.86□□□□□ -0.67
NUP50-212ENST00000461194 POTEBQ6S5H4 581 aa10.86□□□□□ -0.67
NUP50-212ENST00000461194 HS3ST6Q96QI5 342 aa10.86□□□□□ -0.67
NUP50-212ENST00000461194 KCNK17Q96T54 332 aa10.86□□□□□ -0.67
NUP50-212ENST00000461194 ZNF777Q9ULD5 760 aaPredicted RBP10.86□□□□□ -0.67
NUP50-212ENST00000461194 ARID4BQ4LE39 1312 aaPredicted RBP10.85□□□□□ -0.67
NUP50-212ENST00000461194 ZFYVE16Q7Z3T8 1539 aa10.85□□□□□ -0.67
NUP50-212ENST00000461194 ARHGEF40Q8TER5 1519 aa10.85□□□□□ -0.67
NUP50-212ENST00000461194 ARHGEF12Q9NZN5 1544 aa10.85□□□□□ -0.67
NUP50-212ENST00000461194 CDC42BPBQ9Y5S2 1711 aa10.85□□□□□ -0.67
NUP50-212ENST00000461194 COL9A1P20849 921 aa10.85□□□□□ -0.67
NUP50-212ENST00000461194 FECHP22830 423 aa10.85□□□□□ -0.67
NUP50-212ENST00000461194 SLC24A3Q9HC58 644 aa10.85□□□□□ -0.67
NUP50-212ENST00000461194 TRAPPC8Q9Y2L5 1435 aa10.84□□□□□ -0.67
NUP50-212ENST00000461194 ABCC1P33527 1531 aa10.84□□□□□ -0.67
NUP50-212ENST00000461194 MAP3K1Q13233 1512 aa10.84□□□□□ -0.67
NUP50-212ENST00000461194 AXIN2Q9Y2T1 843 aa10.84□□□□□ -0.67
NUP50-212ENST00000461194 TIAM1Q13009 1591 aa10.84□□□□□ -0.67
NUP50-212ENST00000461194 KIAA1107Q9UPP5 1409 aa10.84□□□□□ -0.67
NUP50-212ENST00000461194 KDM5CP41229 1560 aa10.83□□□□□ -0.68
NUP50-212ENST00000461194 LRRC9Q6ZRR7 1453 aa10.83□□□□□ -0.68
NUP50-212ENST00000461194 PSEN2P49810 448 aa10.83□□□□□ -0.68
NUP50-212ENST00000461194 CERKQ8TCT0 537 aa10.83□□□□□ -0.68
NUP50-212ENST00000461194 CDC42BPAQ5VT25 1732 aa10.83□□□□□ -0.68
NUP50-212ENST00000461194 ATP10AO60312 1499 aa10.82□□□□□ -0.68
NUP50-212ENST00000461194 NCOA2Q15596 1464 aa10.82□□□□□ -0.68
NUP50-212ENST00000461194 PLEKHH2Q8IVE3 1493 aa10.82□□□□□ -0.68
NUP50-212ENST00000461194 MLH3Q9UHC1 1453 aa10.82□□□□□ -0.68
NUP50-212ENST00000461194 HNRNPMP52272 730 aaKnown RBP eCLIP10.82□□□□□ -0.68
NUP50-212ENST00000461194 KANK4Q5T7N3 995 aaPredicted RBP10.82□□□□□ -0.68
NUP50-212ENST00000461194 ZNF687Q8N1G0 1237 aa10.82□□□□□ -0.68
NUP50-212ENST00000461194 MYT1LQ9UL68 1186 aa10.82□□□□□ -0.68
NUP50-212ENST00000461194 ARHGAP33O14559 1287 aa10.81□□□□□ -0.68
NUP50-212ENST00000461194 C9orf84Q5VXU9 1444 aa10.81□□□□□ -0.68
NUP50-212ENST00000461194 SAMD9LQ8IVG5 1584 aa10.81□□□□□ -0.68
NUP50-212ENST00000461194 ZNF644Q9H582 1327 aaPredicted RBP10.81□□□□□ -0.68
NUP50-212ENST00000461194 PPP1R3GB7ZBB8 358 aa10.8□□□□□ -0.68
NUP50-212ENST00000461194 PRSS12P56730 875 aa10.8□□□□□ -0.68
NUP50-212ENST00000461194 POTEEQ6S8J3 1075 aa10.8□□□□□ -0.68
NUP50-212ENST00000461194 SYCP2Q9BX26 1530 aa10.79□□□□□ -0.68
NUP50-212ENST00000461194 PADI6Q6TGC4 694 aa10.79□□□□□ -0.68
NUP50-212ENST00000461194 CDCA7LQ96GN5 454 aa10.79□□□□□ -0.68
NUP50-212ENST00000461194 SPAG9O60271 1321 aaKnown RBP10.79□□□□□ -0.68
NUP50-212ENST00000461194 MINK1Q8N4C8 1332 aaPredicted RBP10.79□□□□□ -0.68
NUP50-212ENST00000461194 SUPT6HQ7KZ85 1726 aaKnown RBP10.78□□□□□ -0.68
NUP50-212ENST00000461194 HECW2Q9P2P5 1572 aa10.78□□□□□ -0.68
NUP50-212ENST00000461194 IRF6O14896 467 aa10.78□□□□□ -0.68
NUP50-212ENST00000461194 AK7Q96M32 723 aa10.78□□□□□ -0.68
NUP50-212ENST00000461194 MBD5Q9P267 1494 aa10.78□□□□□ -0.68
NUP50-212ENST00000461194 ADAMTSL3P82987 1691 aa10.78□□□□□ -0.68
NUP50-212ENST00000461194 ITSN2Q9NZM3 1697 aa10.78□□□□□ -0.68
NUP50-212ENST00000461194 PBX2P40425 430 aa10.77□□□□□ -0.69
NUP50-212ENST00000461194 MAP2K5Q13163 448 aa10.77□□□□□ -0.69
NUP50-212ENST00000461194 MLECQ14165 292 aa10.77□□□□□ -0.69
NUP50-212ENST00000461194 RSPH4AQ5TD94 716 aa10.77□□□□□ -0.69
NUP50-212ENST00000461194 BCORL1Q5H9F3 1711 aa10.77□□□□□ -0.69
NUP50-212ENST00000461194 PTPRMP28827 1452 aa10.76□□□□□ -0.69
NUP50-212ENST00000461194 FAM161AQ3B820 660 aa10.76□□□□□ -0.69
NUP50-212ENST00000461194 DMRTA1Q5VZB9 504 aa10.76□□□□□ -0.69
NUP50-212ENST00000461194 DIP2CQ9Y2E4 1556 aa10.76□□□□□ -0.69
NUP50-212ENST00000461194 REREQ9P2R6 1566 aa10.75□□□□□ -0.69
NUP50-212ENST00000461194 PROX2Q3B8N5 592 aa10.75□□□□□ -0.69
NUP50-212ENST00000461194 SIGLEC1Q9BZZ2 1709 aa10.75□□□□□ -0.69
NUP50-212ENST00000461194 FAM198AQ9UFP1 575 aa10.74□□□□□ -0.69
NUP50-212ENST00000461194 MIA2Q96PC5 1412 aa10.74□□□□□ -0.69
NUP50-212ENST00000461194 CAMSAP2Q08AD1 1489 aa10.74□□□□□ -0.69
NUP50-212ENST00000461194 AGLP35573 1532 aa10.74□□□□□ -0.69
NUP50-212ENST00000461194 ABCA6Q8N139 1617 aa10.73□□□□□ -0.69
NUP50-212ENST00000461194 MADDQ8WXG6 1647 aa10.73□□□□□ -0.69
NUP50-212ENST00000461194 KIDINS220Q9ULH0 1771 aa10.73□□□□□ -0.69
NUP50-212ENST00000461194 TTC13Q8NBP0 860 aa10.73□□□□□ -0.69
NUP50-212ENST00000461194 CCDC102AQ96A19 550 aa10.73□□□□□ -0.69
NUP50-212ENST00000461194 ZBED2Q9BTP6 218 aa10.73□□□□□ -0.69
NUP50-212ENST00000461194 RBM27Q9P2N5 1060 aaKnown RBP10.73□□□□□ -0.69
NUP50-212ENST00000461194 TSKSQ9UJT2 592 aa10.73□□□□□ -0.69
NUP50-212ENST00000461194 RTEL1-TNFRSF6BF6WH68 1400 aa10.73□□□□□ -0.69
NUP50-212ENST00000461194 MYOM3Q5VTT5 1437 aa10.73□□□□□ -0.69
NUP50-212ENST00000461194 TRIM6-TRIM34B2RNG4 842 aa10.72□□□□□ -0.69
NUP50-212ENST00000461194 PACS2Q86VP3 889 aa10.72□□□□□ -0.69
NUP50-212ENST00000461194 CCDC141Q6ZP82 1450 aa10.72□□□□□ -0.69
NUP50-212ENST00000461194 ATP7AQ04656 1500 aa10.72□□□□□ -0.69
NUP50-212ENST00000461194 TSPY4P0CV99 314 aa10.71□□□□□ -0.69
NUP50-212ENST00000461194 TSPY10P0CW01 314 aa10.71□□□□□ -0.69
NUP50-212ENST00000461194 POTEGQ6S5H5 508 aa10.71□□□□□ -0.69
NUP50-212ENST00000461194 KIAA1468Q9P260 1216 aa10.71□□□□□ -0.69
NUP50-212ENST00000461194 INO80Q9ULG1 1556 aaPredicted RBP10.7□□□□□ -0.7
NUP50-212ENST00000461194 A2MP01023 1474 aa10.7□□□□□ -0.7
NUP50-212ENST00000461194 TRIM66O15016 1216 aa10.7□□□□□ -0.7
NUP50-212ENST00000461194 ADGRG1Q9Y653 693 aa10.7□□□□□ -0.7
NUP50-212ENST00000461194 OATP04181 439 aa10.69□□□□□ -0.7
NUP50-212ENST00000461194 ANKRD13DQ6ZTN6 518 aa10.69□□□□□ -0.7
NUP50-212ENST00000461194 ARHGEF5Q12774 1597 aa10.69□□□□□ -0.7
NUP50-212ENST00000461194 DHX29Q7Z478 1369 aaKnown RBP10.68□□□□□ -0.7
NUP50-212ENST00000461194 POTEMA6NI47 508 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms