RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 NRXN1Q9ULB1 1477 aa11.26□□□□□ -0.61
HDAC9-219ENST00000461159 PIK3C2GO75747 1445 aa11.26□□□□□ -0.61
HDAC9-219ENST00000461159 LTKP29376 864 aa11.25□□□□□ -0.61
HDAC9-219ENST00000461159 C3P01024 1663 aa11.25□□□□□ -0.61
HDAC9-219ENST00000461159 BCCIPQ9P287 314 aaKnown RBP eCLIP11.24□□□□□ -0.61
HDAC9-219ENST00000461159 CCDC184Q52MB2 194 aa11.24□□□□□ -0.61
HDAC9-219ENST00000461159 RIMS2Q9UQ26 1411 aa11.24□□□□□ -0.61
HDAC9-219ENST00000461159 IQGAP1P46940 1657 aa11.24□□□□□ -0.61
HDAC9-219ENST00000461159 RIMS1Q86UR5 1692 aaKnown RBP11.24□□□□□ -0.61
HDAC9-219ENST00000461159 SLC26A8Q96RN1 970 aa11.23□□□□□ -0.61
HDAC9-219ENST00000461159 TXNDC2Q86VQ3 553 aa11.23□□□□□ -0.61
HDAC9-219ENST00000461159 SCAF11Q99590 1463 aaKnown RBP11.22□□□□□ -0.61
HDAC9-219ENST00000461159 KIAA1210Q9ULL0 1709 aa11.22□□□□□ -0.61
HDAC9-219ENST00000461159 TMF1P82094 1093 aa11.21□□□□□ -0.61
HDAC9-219ENST00000461159 ADGRB1O14514 1584 aa11.21□□□□□ -0.62
HDAC9-219ENST00000461159 ZBED9Q6R2W3 1325 aa11.21□□□□□ -0.62
HDAC9-219ENST00000461159 RRP9O43818 475 aaKnown RBP11.21□□□□□ -0.62
HDAC9-219ENST00000461159 WAPLQ7Z5K2 1190 aa11.21□□□□□ -0.62
HDAC9-219ENST00000461159 IPO4Q8TEX9 1081 aaKnown RBP11.21□□□□□ -0.62
HDAC9-219ENST00000461159 TMEM2Q9UHN6 1383 aa11.2□□□□□ -0.62
HDAC9-219ENST00000461159 PRKRIP1Q9H875 184 aaPredicted RBP11.2□□□□□ -0.62
HDAC9-219ENST00000461159 CENPJQ9HC77 1338 aaPredicted RBP11.19□□□□□ -0.62
HDAC9-219ENST00000461159 HSP90B1P14625 803 aaKnown RBP11.19□□□□□ -0.62
HDAC9-219ENST00000461159 PRAM1Q96QH2 718 aa11.19□□□□□ -0.62
HDAC9-219ENST00000461159 RTL5Q5HYW3 569 aaPredicted RBP11.19□□□□□ -0.62
HDAC9-219ENST00000461159 MINK1Q8N4C8 1332 aaPredicted RBP11.18□□□□□ -0.62
HDAC9-219ENST00000461159 ZFYVE9O95405 1425 aa11.18□□□□□ -0.62
HDAC9-219ENST00000461159 MRS2Q9HD23 443 aa11.18□□□□□ -0.62
HDAC9-219ENST00000461159 METP08581 1390 aa11.18□□□□□ -0.62
HDAC9-219ENST00000461159 ASXL1Q8IXJ9 1541 aa11.18□□□□□ -0.62
HDAC9-219ENST00000461159 FAM9BQ8IZU0 186 aa11.18□□□□□ -0.62
HDAC9-219ENST00000461159 THEMISQ8N1K5 641 aaPredicted RBP11.18□□□□□ -0.62
HDAC9-219ENST00000461159 POGKQ9P215 609 aa11.18□□□□□ -0.62
HDAC9-219ENST00000461159 PANK3Q9H999 370 aa11.17□□□□□ -0.62
HDAC9-219ENST00000461159 EID1Q9Y6B2 187 aa11.17□□□□□ -0.62
HDAC9-219ENST00000461159 UBR1Q8IWV7 1749 aa11.17□□□□□ -0.62
HDAC9-219ENST00000461159 EIF3AQ14152 1382 aaKnown RBP11.17□□□□□ -0.62
HDAC9-219ENST00000461159 B4GALNT3Q6L9W6 998 aa11.17□□□□□ -0.62
HDAC9-219ENST00000461159 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.17□□□□□ -0.62
HDAC9-219ENST00000461159 TMC1Q8TDI8 760 aa11.17□□□□□ -0.62
HDAC9-219ENST00000461159 PTPRMP28827 1452 aa11.16□□□□□ -0.62
HDAC9-219ENST00000461159 CABP2Q9NPB3 220 aa11.16□□□□□ -0.62
HDAC9-219ENST00000461159 ALKQ9UM73 1620 aa11.16□□□□□ -0.62
HDAC9-219ENST00000461159 ADAMTSL3P82987 1691 aa11.16□□□□□ -0.62
HDAC9-219ENST00000461159 PER1O15534 1290 aaPredicted RBP11.16□□□□□ -0.62
HDAC9-219ENST00000461159 RBM33Q96EV2 1170 aaKnown RBP11.16□□□□□ -0.62
HDAC9-219ENST00000461159 NLRP1Q9C000 1473 aa11.15□□□□□ -0.62
HDAC9-219ENST00000461159 PLEKHH1Q9ULM0 1364 aa11.15□□□□□ -0.62
HDAC9-219ENST00000461159 SETBP1Q9Y6X0 1596 aa11.15□□□□□ -0.62
HDAC9-219ENST00000461159 CDK11BP21127 795 aaKnown RBP11.15□□□□□ -0.62
HDAC9-219ENST00000461159 HDGFP51858 240 aaKnown RBP11.15□□□□□ -0.62
HDAC9-219ENST00000461159 YTHDC2Q9H6S0 1430 aaKnown RBP11.15□□□□□ -0.63
HDAC9-219ENST00000461159 CC2D1BQ5T0F9 858 aaKnown RBP11.15□□□□□ -0.63
HDAC9-219ENST00000461159 NOP58Q9Y2X3 529 aaKnown RBP11.15□□□□□ -0.63
HDAC9-219ENST00000461159 KDM4FA0A1W2PPD8 638 aa11.14□□□□□ -0.63
HDAC9-219ENST00000461159 NUTM2FA1L443 756 aa11.14□□□□□ -0.63
HDAC9-219ENST00000461159 HSPA2P54652 639 aa11.14□□□□□ -0.63
HDAC9-219ENST00000461159 SENP3-EIF4A1A0A087X0R7 540 aa11.14□□□□□ -0.63
HDAC9-219ENST00000461159 SLC12A5Q9H2X9 1139 aa11.14□□□□□ -0.63
HDAC9-219ENST00000461159 SRPK2P78362 688 aaKnown RBP11.13□□□□□ -0.63
HDAC9-219ENST00000461159 HSP90AA2PQ14568 343 aaPredicted RBP11.13□□□□□ -0.63
HDAC9-219ENST00000461159 BBXQ8WY36 941 aaPredicted RBP11.13□□□□□ -0.63
HDAC9-219ENST00000461159 MYO3AQ8NEV4 1616 aa11.12□□□□□ -0.63
HDAC9-219ENST00000461159 NRXN3Q9Y4C0 1643 aa11.11□□□□□ -0.63
HDAC9-219ENST00000461159 ARHGEF28Q8N1W1 1705 aaKnown RBP11.11□□□□□ -0.63
HDAC9-219ENST00000461159 SETD1BQ9UPS6 1966 aaKnown RBP11.11□□□□□ -0.63
HDAC9-219ENST00000461159 QRICH2Q9H0J4 1663 aa11.11□□□□□ -0.63
HDAC9-219ENST00000461159 CEP170BQ9Y4F5 1589 aaPredicted RBP11.11□□□□□ -0.63
HDAC9-219ENST00000461159 ADAMTS13Q76LX8 1427 aa11.11□□□□□ -0.63
HDAC9-219ENST00000461159 SMG6Q86US8 1419 aaKnown RBP11.11□□□□□ -0.63
HDAC9-219ENST00000461159 NCKAP5LQ9HCH0 1330 aa11.11□□□□□ -0.63
HDAC9-219ENST00000461159 CHRM1P11229 460 aaPredicted RBP11.11□□□□□ -0.63
HDAC9-219ENST00000461159 TEX2Q8IWB9 1127 aa11.11□□□□□ -0.63
HDAC9-219ENST00000461159 CHMP4BQ9H444 224 aaKnown RBP11.11□□□□□ -0.63
HDAC9-219ENST00000461159 NBR1Q14596 966 aa11.1□□□□□ -0.63
HDAC9-219ENST00000461159 ANKLE2Q86XL3 938 aa11.1□□□□□ -0.63
HDAC9-219ENST00000461159 AMOTL2Q9Y2J4 779 aa11.1□□□□□ -0.63
HDAC9-219ENST00000461159 MYOM1P52179 1685 aa11.1□□□□□ -0.63
HDAC9-219ENST00000461159 SETD1AO15047 1707 aaKnown RBP11.09□□□□□ -0.63
HDAC9-219ENST00000461159 GTF2E1P29083 439 aaPredicted RBP11.09□□□□□ -0.63
HDAC9-219ENST00000461159 ANP32AP39687 249 aaKnown RBP11.09□□□□□ -0.63
HDAC9-219ENST00000461159 CALD1Q05682 793 aaKnown RBP11.09□□□□□ -0.63
HDAC9-219ENST00000461159 CDCA8Q53HL2 280 aa11.09□□□□□ -0.63
HDAC9-219ENST00000461159 FAM43AQ8N2R8 423 aa11.09□□□□□ -0.63
HDAC9-219ENST00000461159 CARD14Q9BXL6 1004 aa11.09□□□□□ -0.63
HDAC9-219ENST00000461159 ROBO2Q9HCK4 1378 aa11.08□□□□□ -0.64
HDAC9-219ENST00000461159 PLEKHG1Q9ULL1 1385 aa11.08□□□□□ -0.64
HDAC9-219ENST00000461159 EVC2Q86UK5 1308 aa11.08□□□□□ -0.64
HDAC9-219ENST00000461159 CDK19Q9BWU1 502 aa11.08□□□□□ -0.64
HDAC9-219ENST00000461159 PRDM4Q9UKN5 801 aa11.08□□□□□ -0.64
HDAC9-219ENST00000461159 ZFP91Q96JP5 570 aaPredicted RBP11.08□□□□□ -0.64
HDAC9-219ENST00000461159 LRPPRCP42704 1394 aaKnown RBP11.07□□□□□ -0.64
HDAC9-219ENST00000461159 KCNA6P17658 529 aa11.07□□□□□ -0.64
HDAC9-219ENST00000461159 NUDCQ9Y266 331 aa11.07□□□□□ -0.64
HDAC9-219ENST00000461159 KNSTRNQ9Y448 316 aa11.07□□□□□ -0.64
HDAC9-219ENST00000461159 PTPRUQ92729 1446 aa11.07□□□□□ -0.64
HDAC9-219ENST00000461159 SBNO2Q9Y2G9 1366 aa11.07□□□□□ -0.64
HDAC9-219ENST00000461159 TULP4Q9NRJ4 1543 aa11.07□□□□□ -0.64
HDAC9-219ENST00000461159 ARHGAP23Q9P227 1491 aa11.07□□□□□ -0.64
HDAC9-219ENST00000461159 KDM5AP29375 1690 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms