RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 KIF1BO60333 1816 aa26.26■■□□□ 1.79
TOP3A-202ENST00000461127 MYOM2P54296 1465 aa26.25■■□□□ 1.79
TOP3A-202ENST00000461127 HFM1A2PYH4 1435 aa26.24■■□□□ 1.79
TOP3A-202ENST00000461127 GJD4Q96KN9 370 aaPredicted RBP26.24■■□□□ 1.79
TOP3A-202ENST00000461127 BCL9LQ86UU0 1499 aa26.23■■□□□ 1.79
TOP3A-202ENST00000461127 ESCO1Q5FWF5 840 aa26.23■■□□□ 1.79
TOP3A-202ENST00000461127 PRAG1Q86YV5 1406 aa26.22■■□□□ 1.79
TOP3A-202ENST00000461127 MARF1Q9Y4F3 1742 aaKnown RBP26.2■■□□□ 1.79
TOP3A-202ENST00000461127 BLMP54132 1417 aaPredicted RBP26.18■■□□□ 1.78
TOP3A-202ENST00000461127 LRPPRCP42704 1394 aaKnown RBP26.18■■□□□ 1.78
TOP3A-202ENST00000461127 PXDNQ92626 1479 aa26.17■■□□□ 1.78
TOP3A-202ENST00000461127 FOXO3O43524 673 aa26.16■■□□□ 1.78
TOP3A-202ENST00000461127 RPGRIP1LQ68CZ1 1315 aa26.15■■□□□ 1.78
TOP3A-202ENST00000461127 SF3B2Q13435 895 aaKnown RBP26.15■■□□□ 1.78
TOP3A-202ENST00000461127 CDC42BPGQ6DT37 1551 aa26.15■■□□□ 1.78
TOP3A-202ENST00000461127 XPCQ01831 940 aaPredicted RBP26.14■■□□□ 1.78
TOP3A-202ENST00000461127 UNC5CLQ8IV45 518 aa26.14■■□□□ 1.78
TOP3A-202ENST00000461127 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.14■■□□□ 1.77
TOP3A-202ENST00000461127 RALGAPBQ86X10 1494 aa26.11■■□□□ 1.77
TOP3A-202ENST00000461127 SLIT2O94813 1529 aa26.08■■□□□ 1.77
TOP3A-202ENST00000461127 DEFB132Q7Z7B7 95 aa26.07■■□□□ 1.76
TOP3A-202ENST00000461127 GLI3P10071 1580 aa26.07■■□□□ 1.76
TOP3A-202ENST00000461127 NAIPQ13075 1403 aa26.06■■□□□ 1.76
TOP3A-202ENST00000461127 NUTM2FA1L443 756 aa26.05■■□□□ 1.76
TOP3A-202ENST00000461127 HAP1P54257 671 aaPredicted RBP26.04■■□□□ 1.76
TOP3A-202ENST00000461127 PPLO60437 1756 aa26.04■■□□□ 1.76
TOP3A-202ENST00000461127 SEPT12Q8IYM1 358 aa26.03■■□□□ 1.76
TOP3A-202ENST00000461127 SPATA31A3Q5VYP0 1347 aa26.03■■□□□ 1.76
TOP3A-202ENST00000461127 BRWD3Q6RI45 1802 aa26.02■■□□□ 1.76
TOP3A-202ENST00000461127 CCDC144AA2RUR9 1427 aa26.02■■□□□ 1.76
TOP3A-202ENST00000461127 LRP5O75197 1615 aa26.02■■□□□ 1.76
TOP3A-202ENST00000461127 USP32Q8NFA0 1604 aa26■■□□□ 1.75
TOP3A-202ENST00000461127 STK26Q9P289 416 aa26■■□□□ 1.75
TOP3A-202ENST00000461127 VPS72Q15906 364 aa25.99■■□□□ 1.75
TOP3A-202ENST00000461127 CCDC9Q9Y3X0 531 aaKnown RBP25.99■■□□□ 1.75
TOP3A-202ENST00000461127 WAPLQ7Z5K2 1190 aa25.98■■□□□ 1.75
TOP3A-202ENST00000461127 KIF1AQ12756 1690 aa25.98■■□□□ 1.75
TOP3A-202ENST00000461127 KRT28Q7Z3Y7 464 aa25.97■■□□□ 1.75
TOP3A-202ENST00000461127 KRT27Q7Z3Y8 459 aa25.97■■□□□ 1.75
TOP3A-202ENST00000461127 TECPR2O15040 1411 aa25.97■■□□□ 1.75
TOP3A-202ENST00000461127 SLC4A1APQ9BWU0 796 aaKnown RBP25.96■■□□□ 1.75
TOP3A-202ENST00000461127 BAG6P46379 1132 aa25.95■■□□□ 1.74
TOP3A-202ENST00000461127 PSME1Q06323 249 aa25.94■■□□□ 1.74
TOP3A-202ENST00000461127 ONECUT3O60422 494 aaPredicted RBP25.93■■□□□ 1.74
TOP3A-202ENST00000461127 RRBP1Q9P2E9 1410 aaKnown RBP25.93■■□□□ 1.74
TOP3A-202ENST00000461127 FMN2Q9NZ56 1722 aa25.93■■□□□ 1.74
TOP3A-202ENST00000461127 ABCC11Q96J66 1382 aa25.93■■□□□ 1.74
TOP3A-202ENST00000461127 ADGRF5Q8IZF2 1346 aa25.92■■□□□ 1.74
TOP3A-202ENST00000461127 TNS3Q68CZ2 1445 aa25.92■■□□□ 1.74
TOP3A-202ENST00000461127 A0A0G2JS52 829 aa25.92■■□□□ 1.74
TOP3A-202ENST00000461127 MYT1Q01538 1121 aa25.92■■□□□ 1.74
TOP3A-202ENST00000461127 PPARGC1BQ86YN6 1023 aaKnown RBP25.92■■□□□ 1.74
TOP3A-202ENST00000461127 NWD2Q9ULI1 1742 aa25.91■■□□□ 1.74
TOP3A-202ENST00000461127 PSDA5PKW4 1024 aaPredicted RBP25.9■■□□□ 1.74
TOP3A-202ENST00000461127 CABLES1Q8TDN4 633 aa25.89■■□□□ 1.74
TOP3A-202ENST00000461127 PLEKHH1Q9ULM0 1364 aa25.89■■□□□ 1.74
TOP3A-202ENST00000461127 PLCH1Q4KWH8 1693 aa25.89■■□□□ 1.73
TOP3A-202ENST00000461127 KNDC1Q76NI1 1749 aa25.88■■□□□ 1.73
TOP3A-202ENST00000461127 PLEKHG5O94827 1062 aa25.88■■□□□ 1.73
TOP3A-202ENST00000461127 HRCP23327 699 aa25.88■■□□□ 1.73
TOP3A-202ENST00000461127 LMOD2Q6P5Q4 547 aa25.88■■□□□ 1.73
TOP3A-202ENST00000461127 PHF8Q9UPP1 1060 aa25.88■■□□□ 1.73
TOP3A-202ENST00000461127 ANKRD30BQ9BXX2 1392 aa25.87■■□□□ 1.73
TOP3A-202ENST00000461127 RGL3Q3MIN7 710 aa25.87■■□□□ 1.73
TOP3A-202ENST00000461127 TMEM132EQ6IEE7 984 aa25.87■■□□□ 1.73
TOP3A-202ENST00000461127 ARHGEF10O15013 1369 aa25.86■■□□□ 1.73
TOP3A-202ENST00000461127 SBNO1A3KN83 1393 aa25.84■■□□□ 1.73
TOP3A-202ENST00000461127 YTHDC2Q9H6S0 1430 aaKnown RBP25.83■■□□□ 1.73
TOP3A-202ENST00000461127 SIRT1Q96EB6 747 aa25.82■■□□□ 1.72
TOP3A-202ENST00000461127 IFT172Q9UG01 1749 aa25.81■■□□□ 1.72
TOP3A-202ENST00000461127 FAM98CQ17RN3 349 aaKnown RBP25.81■■□□□ 1.72
TOP3A-202ENST00000461127 RGPD8O14715 1765 aaPredicted RBP25.8■■□□□ 1.72
TOP3A-202ENST00000461127 FAM83GA6ND36 823 aa25.8■■□□□ 1.72
TOP3A-202ENST00000461127 ABCA3Q99758 1704 aa25.8■■□□□ 1.72
TOP3A-202ENST00000461127 PIK3C2GO75747 1445 aa25.79■■□□□ 1.72
TOP3A-202ENST00000461127 NRXN1Q9ULB1 1477 aa25.79■■□□□ 1.72
TOP3A-202ENST00000461127 EN1Q05925 392 aaPredicted RBP25.78■■□□□ 1.72
TOP3A-202ENST00000461127 SPATA31E1Q6ZUB1 1445 aa25.78■■□□□ 1.72
TOP3A-202ENST00000461127 RGPD1P0DJD0 1748 aa25.77■■□□□ 1.72
TOP3A-202ENST00000461127 BTG4Q9NY30 223 aa25.76■■□□□ 1.71
TOP3A-202ENST00000461127 R3HDM1Q15032 1099 aaKnown RBP25.75■■□□□ 1.71
TOP3A-202ENST00000461127 NRAPQ86VF7 1730 aa25.73■■□□□ 1.71
TOP3A-202ENST00000461127 DHX57Q6P158 1386 aaKnown RBP25.72■■□□□ 1.71
TOP3A-202ENST00000461127 PMFBP1Q8TBY8 1022 aa25.71■■□□□ 1.71
TOP3A-202ENST00000461127 SAFB2Q14151 953 aaKnown RBP eCLIP25.7■■□□□ 1.7
TOP3A-202ENST00000461127 C14orf93Q9H972 538 aaKnown RBP25.7■■□□□ 1.7
TOP3A-202ENST00000461127 DISP2A7MBM2 1401 aa25.7■■□□□ 1.7
TOP3A-202ENST00000461127 COL14A1Q05707 1796 aaKnown RBP25.69■■□□□ 1.7
TOP3A-202ENST00000461127 ANKARQ7Z5J8 1434 aa25.69■■□□□ 1.7
TOP3A-202ENST00000461127 FAM182BQ5T319 152 aa25.68■■□□□ 1.7
TOP3A-202ENST00000461127 PRAM1Q96QH2 718 aa25.68■■□□□ 1.7
TOP3A-202ENST00000461127 SPATA31A5Q5VU36 1347 aa25.67■■□□□ 1.7
TOP3A-202ENST00000461127 SPATA31A7Q8IWB4 1347 aa25.67■■□□□ 1.7
TOP3A-202ENST00000461127 POGKQ9P215 609 aa25.67■■□□□ 1.7
TOP3A-202ENST00000461127 GPRASP1Q5JY77 1395 aa25.67■■□□□ 1.7
TOP3A-202ENST00000461127 EZH2Q15910 746 aaKnown RBP25.64■■□□□ 1.7
TOP3A-202ENST00000461127 ADGRB2O60241 1585 aa25.64■■□□□ 1.69
TOP3A-202ENST00000461127 CFAP70Q5T0N1 1121 aa25.63■■□□□ 1.69
TOP3A-202ENST00000461127 MPHOSPH9Q99550 1183 aa25.62■■□□□ 1.69
TOP3A-202ENST00000461127 TNS1Q9HBL0 1735 aaKnown RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms