RNA–Protein interactions for RNA: ENST00000460903.2

YIPF3-206, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 605 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-206ENST00000460903 GLI3P10071 1580 aa23.64■■□□□ 1.37
YIPF3-206ENST00000460903 NUP155O75694 1391 aa23.59■■□□□ 1.37
YIPF3-206ENST00000460903 PXDNQ92626 1479 aa23.58■■□□□ 1.37
YIPF3-206ENST00000460903 ZNF326Q5BKZ1 582 aaKnown RBP23.58■■□□□ 1.37
YIPF3-206ENST00000460903 ROBO2Q9HCK4 1378 aa23.57■■□□□ 1.36
YIPF3-206ENST00000460903 BLMP54132 1417 aaPredicted RBP23.57■■□□□ 1.36
YIPF3-206ENST00000460903 ROCK1Q13464 1354 aa23.56■■□□□ 1.36
YIPF3-206ENST00000460903 GJD4Q96KN9 370 aaPredicted RBP23.55■■□□□ 1.36
YIPF3-206ENST00000460903 PRAG1Q86YV5 1406 aa23.54■■□□□ 1.36
YIPF3-206ENST00000460903 CDC42BPGQ6DT37 1551 aa23.53■■□□□ 1.36
YIPF3-206ENST00000460903 PPLO60437 1756 aa23.53■■□□□ 1.36
YIPF3-206ENST00000460903 RALGAPBQ86X10 1494 aa23.52■■□□□ 1.36
YIPF3-206ENST00000460903 DEFB132Q7Z7B7 95 aa23.52■■□□□ 1.36
YIPF3-206ENST00000460903 PLCH1Q4KWH8 1693 aa23.51■■□□□ 1.35
YIPF3-206ENST00000460903 USP32Q8NFA0 1604 aa23.5■■□□□ 1.35
YIPF3-206ENST00000460903 SLIT2O94813 1529 aa23.49■■□□□ 1.35
YIPF3-206ENST00000460903 RGPD8O14715 1765 aaPredicted RBP23.49■■□□□ 1.35
YIPF3-206ENST00000460903 ABCA3Q99758 1704 aa23.47■■□□□ 1.35
YIPF3-206ENST00000460903 NWD2Q9ULI1 1742 aa23.47■■□□□ 1.35
YIPF3-206ENST00000460903 NPHP3Q7Z494 1330 aa23.46■■□□□ 1.35
YIPF3-206ENST00000460903 HFM1A2PYH4 1435 aa23.45■■□□□ 1.34
YIPF3-206ENST00000460903 XPCQ01831 940 aaPredicted RBP23.45■■□□□ 1.34
YIPF3-206ENST00000460903 FMN2Q9NZ56 1722 aa23.43■■□□□ 1.34
YIPF3-206ENST00000460903 KIF1AQ12756 1690 aa23.42■■□□□ 1.34
YIPF3-206ENST00000460903 ESCO1Q5FWF5 840 aa23.42■■□□□ 1.34
YIPF3-206ENST00000460903 UNC5CLQ8IV45 518 aa23.42■■□□□ 1.34
YIPF3-206ENST00000460903 FOXO3O43524 673 aa23.41■■□□□ 1.34
YIPF3-206ENST00000460903 RGPD1P0DJD0 1748 aa23.39■■□□□ 1.33
YIPF3-206ENST00000460903 IFT172Q9UG01 1749 aa23.39■■□□□ 1.33
YIPF3-206ENST00000460903 KNDC1Q76NI1 1749 aa23.38■■□□□ 1.33
YIPF3-206ENST00000460903 NRAPQ86VF7 1730 aa23.37■■□□□ 1.33
YIPF3-206ENST00000460903 PSDA5PKW4 1024 aaPredicted RBP23.36■■□□□ 1.33
YIPF3-206ENST00000460903 SF3B2Q13435 895 aaKnown RBP23.36■■□□□ 1.33
YIPF3-206ENST00000460903 SEPT12Q8IYM1 358 aa23.36■■□□□ 1.33
YIPF3-206ENST00000460903 NAIPQ13075 1403 aa23.35■■□□□ 1.33
YIPF3-206ENST00000460903 TNS1Q9HBL0 1735 aaKnown RBP23.35■■□□□ 1.33
YIPF3-206ENST00000460903 HRCP23327 699 aa23.34■■□□□ 1.33
YIPF3-206ENST00000460903 LRPPRCP42704 1394 aaKnown RBP23.33■■□□□ 1.33
YIPF3-206ENST00000460903 VGFO15240 615 aaPredicted RBP23.33■■□□□ 1.33
YIPF3-206ENST00000460903 SPATA31A3Q5VYP0 1347 aa23.33■■□□□ 1.32
YIPF3-206ENST00000460903 ITGAEP38570 1179 aa23.32■■□□□ 1.32
YIPF3-206ENST00000460903 NUTM2FA1L443 756 aa23.31■■□□□ 1.32
YIPF3-206ENST00000460903 ONECUT3O60422 494 aaPredicted RBP23.29■■□□□ 1.32
YIPF3-206ENST00000460903 VPS72Q15906 364 aa23.29■■□□□ 1.32
YIPF3-206ENST00000460903 CCDC144AA2RUR9 1427 aa23.28■■□□□ 1.32
YIPF3-206ENST00000460903 KRT27Q7Z3Y8 459 aa23.28■■□□□ 1.32
YIPF3-206ENST00000460903 TECPR2O15040 1411 aa23.26■■□□□ 1.31
YIPF3-206ENST00000460903 TNS3Q68CZ2 1445 aa23.25■■□□□ 1.31
YIPF3-206ENST00000460903 BAG6P46379 1132 aa23.24■■□□□ 1.31
YIPF3-206ENST00000460903 WAPLQ7Z5K2 1190 aa23.24■■□□□ 1.31
YIPF3-206ENST00000460903 RPGRIP1LQ68CZ1 1315 aa23.24■■□□□ 1.31
YIPF3-206ENST00000460903 CABLES1Q8TDN4 633 aa23.23■■□□□ 1.31
YIPF3-206ENST00000460903 PLEKHH1Q9ULM0 1364 aa23.23■■□□□ 1.31
YIPF3-206ENST00000460903 CCDC9Q9Y3X0 531 aaKnown RBP23.22■■□□□ 1.31
YIPF3-206ENST00000460903 KRT28Q7Z3Y7 464 aa23.21■■□□□ 1.31
YIPF3-206ENST00000460903 TRPM3Q9HCF6 1732 aaPredicted RBP23.2■■□□□ 1.3
YIPF3-206ENST00000460903 THSD7AQ9UPZ6 1657 aa23.2■■□□□ 1.3
YIPF3-206ENST00000460903 COL14A1Q05707 1796 aaKnown RBP23.19■■□□□ 1.3
YIPF3-206ENST00000460903 CRYBG1Q9Y4K1 1723 aa23.19■■□□□ 1.3
YIPF3-206ENST00000460903 EN1Q05925 392 aaPredicted RBP23.19■■□□□ 1.3
YIPF3-206ENST00000460903 STK26Q9P289 416 aa23.18■■□□□ 1.3
YIPF3-206ENST00000460903 RREB1Q92766 1687 aa23.17■■□□□ 1.3
YIPF3-206ENST00000460903 ALS2Q96Q42 1657 aa23.17■■□□□ 1.3
YIPF3-206ENST00000460903 PLEKHG5O94827 1062 aa23.17■■□□□ 1.3
YIPF3-206ENST00000460903 HAP1P54257 671 aaPredicted RBP23.17■■□□□ 1.3
YIPF3-206ENST00000460903 R3HDM1Q15032 1099 aaKnown RBP23.17■■□□□ 1.3
YIPF3-206ENST00000460903 RRBP1Q9P2E9 1410 aaKnown RBP23.16■■□□□ 1.3
YIPF3-206ENST00000460903 ADGRF5Q8IZF2 1346 aa23.16■■□□□ 1.3
YIPF3-206ENST00000460903 DISP2A7MBM2 1401 aa23.16■■□□□ 1.3
YIPF3-206ENST00000460903 NUP188Q5SRE5 1749 aa23.15■■□□□ 1.3
YIPF3-206ENST00000460903 NRXN1Q9ULB1 1477 aa23.15■■□□□ 1.3
YIPF3-206ENST00000460903 ABCC11Q96J66 1382 aa23.14■■□□□ 1.3
YIPF3-206ENST00000460903 A0A0G2JS52 829 aa23.14■■□□□ 1.29
YIPF3-206ENST00000460903 FAM83GA6ND36 823 aa23.14■■□□□ 1.29
YIPF3-206ENST00000460903 MYT1Q01538 1121 aa23.14■■□□□ 1.29
YIPF3-206ENST00000460903 FAM98CQ17RN3 349 aaKnown RBP23.14■■□□□ 1.29
YIPF3-206ENST00000460903 FAM182BQ5T319 152 aa23.14■■□□□ 1.29
YIPF3-206ENST00000460903 SBNO1A3KN83 1393 aa23.13■■□□□ 1.29
YIPF3-206ENST00000460903 ADGRB2O60241 1585 aa23.12■■□□□ 1.29
YIPF3-206ENST00000460903 TMEM132EQ6IEE7 984 aa23.11■■□□□ 1.29
YIPF3-206ENST00000460903 PHF8Q9UPP1 1060 aa23.11■■□□□ 1.29
YIPF3-206ENST00000460903 ARHGEF10O15013 1369 aa23.09■■□□□ 1.29
YIPF3-206ENST00000460903 YTHDC2Q9H6S0 1430 aaKnown RBP23.08■■□□□ 1.29
YIPF3-206ENST00000460903 PSME1Q06323 249 aa23.08■■□□□ 1.29
YIPF3-206ENST00000460903 PIK3C2GO75747 1445 aa23.08■■□□□ 1.28
YIPF3-206ENST00000460903 EZH2Q15910 746 aaKnown RBP23.07■■□□□ 1.28
YIPF3-206ENST00000460903 LMOD2Q6P5Q4 547 aa23.07■■□□□ 1.28
YIPF3-206ENST00000460903 YY1P25490 414 aa23.06■■□□□ 1.28
YIPF3-206ENST00000460903 BTG4Q9NY30 223 aa23.06■■□□□ 1.28
YIPF3-206ENST00000460903 SPATA31E1Q6ZUB1 1445 aa23.06■■□□□ 1.28
YIPF3-206ENST00000460903 CAMTA1Q9Y6Y1 1673 aa23.04■■□□□ 1.28
YIPF3-206ENST00000460903 CAMKK2Q96RR4 588 aa23.02■■□□□ 1.28
YIPF3-206ENST00000460903 SPATA31A5Q5VU36 1347 aa23.02■■□□□ 1.28
YIPF3-206ENST00000460903 SPATA31A7Q8IWB4 1347 aa23.02■■□□□ 1.28
YIPF3-206ENST00000460903 PPARGC1BQ86YN6 1023 aaKnown RBP23.01■■□□□ 1.27
YIPF3-206ENST00000460903 SLC4A1APQ9BWU0 796 aaKnown RBP23.01■■□□□ 1.27
YIPF3-206ENST00000460903 ANKRD30BQ9BXX2 1392 aa23.01■■□□□ 1.27
YIPF3-206ENST00000460903 PHRF1Q9P1Y6 1649 aaKnown RBP23■■□□□ 1.27
YIPF3-206ENST00000460903 RGL3Q3MIN7 710 aa23■■□□□ 1.27
YIPF3-206ENST00000460903 SIRT1Q96EB6 747 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms