RNA–Protein interactions for RNA: ENST00000460841.1

C4A-245, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-245ENST00000460841 SHPRHQ149N8 1683 aa23.07■■□□□ 1.28
C4A-245ENST00000460841 PLEKHH1Q9ULM0 1364 aa23.07■■□□□ 1.28
C4A-245ENST00000460841 ZNF772Q68DY9 489 aaPredicted RBP23.07■■□□□ 1.28
C4A-245ENST00000460841 LRRC59Q96AG4 307 aaKnown RBP23.07■■□□□ 1.28
C4A-245ENST00000460841 TECPR2O15040 1411 aa23.07■■□□□ 1.28
C4A-245ENST00000460841 YTHDC2Q9H6S0 1430 aaKnown RBP23.06■■□□□ 1.28
C4A-245ENST00000460841 NRXN1Q9ULB1 1477 aa23.05■■□□□ 1.28
C4A-245ENST00000460841 MYOM2P54296 1465 aa23.04■■□□□ 1.28
C4A-245ENST00000460841 NUTM2FA1L443 756 aa23.03■■□□□ 1.28
C4A-245ENST00000460841 KDM2AQ9Y2K7 1162 aa23.03■■□□□ 1.28
C4A-245ENST00000460841 ESCO1Q5FWF5 840 aa23.02■■□□□ 1.28
C4A-245ENST00000460841 DCAF11Q8TEB1 546 aa23.01■■□□□ 1.27
C4A-245ENST00000460841 DHX57Q6P158 1386 aaKnown RBP23.01■■□□□ 1.27
C4A-245ENST00000460841 KNDC1Q76NI1 1749 aa23■■□□□ 1.27
C4A-245ENST00000460841 CDC42BPGQ6DT37 1551 aa23■■□□□ 1.27
C4A-245ENST00000460841 PNPLA6Q8IY17 1366 aa23■■□□□ 1.27
C4A-245ENST00000460841 SIRT1Q96EB6 747 aa22.99■■□□□ 1.27
C4A-245ENST00000460841 SOS2Q07890 1332 aaPredicted RBP22.99■■□□□ 1.27
C4A-245ENST00000460841 RXRBP28702 533 aa22.97■■□□□ 1.27
C4A-245ENST00000460841 LAMC1P11047 1609 aa22.97■■□□□ 1.27
C4A-245ENST00000460841 SAFB2Q14151 953 aaKnown RBP eCLIP22.96■■□□□ 1.27
C4A-245ENST00000460841 FOXO3O43524 673 aa22.95■■□□□ 1.26
C4A-245ENST00000460841 PRAM1Q96QH2 718 aa22.95■■□□□ 1.26
C4A-245ENST00000460841 XPCQ01831 940 aaPredicted RBP22.94■■□□□ 1.26
C4A-245ENST00000460841 NPHP3Q7Z494 1330 aa22.92■■□□□ 1.26
C4A-245ENST00000460841 UPF1Q92900 1129 aaKnown RBP eCLIP22.92■■□□□ 1.26
C4A-245ENST00000460841 TRAK1Q9UPV9 953 aa22.92■■□□□ 1.26
C4A-245ENST00000460841 AFF2P51816 1311 aa22.91■■□□□ 1.26
C4A-245ENST00000460841 ADAMTS2O95450 1211 aa22.91■■□□□ 1.26
C4A-245ENST00000460841 C8orf37Q96NL8 207 aa22.91■■□□□ 1.26
C4A-245ENST00000460841 POGKQ9P215 609 aa22.91■■□□□ 1.26
C4A-245ENST00000460841 ADGRB1O14514 1584 aa22.9■■□□□ 1.26
C4A-245ENST00000460841 FMN2Q9NZ56 1722 aa22.9■■□□□ 1.26
C4A-245ENST00000460841 PXDNQ92626 1479 aa22.88■■□□□ 1.25
C4A-245ENST00000460841 STAC3Q96MF2 364 aa22.88■■□□□ 1.25
C4A-245ENST00000460841 DLC1Q96QB1 1528 aa22.86■■□□□ 1.25
C4A-245ENST00000460841 RGPD8O14715 1765 aaPredicted RBP22.86■■□□□ 1.25
C4A-245ENST00000460841 NGLY1Q96IV0 654 aa22.85■■□□□ 1.25
C4A-245ENST00000460841 HIRIP3Q9BW71 556 aaPredicted RBP22.85■■□□□ 1.25
C4A-245ENST00000460841 QTRT2Q9H974 415 aaKnown RBP22.85■■□□□ 1.25
C4A-245ENST00000460841 PHF8Q9UPP1 1060 aa22.83■■□□□ 1.25
C4A-245ENST00000460841 MINK1Q8N4C8 1332 aaPredicted RBP22.82■■□□□ 1.24
C4A-245ENST00000460841 KRT28Q7Z3Y7 464 aa22.82■■□□□ 1.24
C4A-245ENST00000460841 CDK12Q9NYV4 1490 aaPredicted RBP22.8■■□□□ 1.24
C4A-245ENST00000460841 COL22A1Q8NFW1 1626 aaPredicted RBP22.8■■□□□ 1.24
C4A-245ENST00000460841 RBM6P78332 1123 aaKnown RBP22.8■■□□□ 1.24
C4A-245ENST00000460841 SPATA31A3Q5VYP0 1347 aa22.79■■□□□ 1.24
C4A-245ENST00000460841 KIF1AQ12756 1690 aa22.78■■□□□ 1.24
C4A-245ENST00000460841 PMFBP1Q8TBY8 1022 aa22.78■■□□□ 1.24
C4A-245ENST00000460841 USP21Q9UK80 565 aa22.76■■□□□ 1.23
C4A-245ENST00000460841 USP32Q8NFA0 1604 aa22.75■■□□□ 1.23
C4A-245ENST00000460841 WASLO00401 505 aaPredicted RBP22.75■■□□□ 1.23
C4A-245ENST00000460841 PSME1Q06323 249 aa22.75■■□□□ 1.23
C4A-245ENST00000460841 NBPF1Q3BBV0 1214 aa22.75■■□□□ 1.23
C4A-245ENST00000460841 SIN3AQ96ST3 1273 aa22.75■■□□□ 1.23
C4A-245ENST00000460841 PRR36Q9H6K5 1346 aa22.75■■□□□ 1.23
C4A-245ENST00000460841 ADGRB2O60241 1585 aa22.75■■□□□ 1.23
C4A-245ENST00000460841 FNBP4Q8N3X1 1017 aaPredicted RBP22.74■■□□□ 1.23
C4A-245ENST00000460841 ANKARQ7Z5J8 1434 aa22.74■■□□□ 1.23
C4A-245ENST00000460841 PLEKHG5O94827 1062 aa22.73■■□□□ 1.23
C4A-245ENST00000460841 ARHGEF28Q8N1W1 1705 aaKnown RBP22.71■■□□□ 1.23
C4A-245ENST00000460841 LMOD2Q6P5Q4 547 aa22.71■■□□□ 1.23
C4A-245ENST00000460841 CABLES1Q8TDN4 633 aa22.71■■□□□ 1.23
C4A-245ENST00000460841 RGS12O14924 1447 aa22.71■■□□□ 1.23
C4A-245ENST00000460841 L3MBTL2Q969R5 705 aa22.7■■□□□ 1.22
C4A-245ENST00000460841 TNS3Q68CZ2 1445 aa22.69■■□□□ 1.22
C4A-245ENST00000460841 NEUROD1Q13562 356 aa22.69■■□□□ 1.22
C4A-245ENST00000460841 TRPC5Q9UL62 973 aaPredicted RBP22.69■■□□□ 1.22
C4A-245ENST00000460841 SBNO1A3KN83 1393 aa22.68■■□□□ 1.22
C4A-245ENST00000460841 TULP4Q9NRJ4 1543 aa22.67■■□□□ 1.22
C4A-245ENST00000460841 EIF3AQ14152 1382 aaKnown RBP22.67■■□□□ 1.22
C4A-245ENST00000460841 KIAA1210Q9ULL0 1709 aa22.67■■□□□ 1.22
C4A-245ENST00000460841 MARF1Q9Y4F3 1742 aaKnown RBP22.67■■□□□ 1.22
C4A-245ENST00000460841 BCL9LQ86UU0 1499 aa22.66■■□□□ 1.22
C4A-245ENST00000460841 HAP1P54257 671 aaPredicted RBP22.65■■□□□ 1.22
C4A-245ENST00000460841 NUDT16Q96DE0 195 aaKnown RBP22.65■■□□□ 1.22
C4A-245ENST00000460841 CDK19Q9BWU1 502 aa22.65■■□□□ 1.22
C4A-245ENST00000460841 ATRNO75882 1429 aa22.65■■□□□ 1.22
C4A-245ENST00000460841 NGDNQ8NEJ9 315 aaKnown RBP22.64■■□□□ 1.21
C4A-245ENST00000460841 ARHGEF10O15013 1369 aa22.63■■□□□ 1.21
C4A-245ENST00000460841 GPRASP1Q5JY77 1395 aa22.63■■□□□ 1.21
C4A-245ENST00000460841 ATP7BP35670 1465 aa22.6■■□□□ 1.21
C4A-245ENST00000460841 TRPM3Q9HCF6 1732 aaPredicted RBP22.6■■□□□ 1.21
C4A-245ENST00000460841 UNC5CLQ8IV45 518 aa22.6■■□□□ 1.21
C4A-245ENST00000460841 ATAD2Q6PL18 1390 aa22.6■■□□□ 1.21
C4A-245ENST00000460841 SLIT2O94813 1529 aa22.59■■□□□ 1.21
C4A-245ENST00000460841 PAK3O75914 559 aaPredicted RBP22.59■■□□□ 1.21
C4A-245ENST00000460841 GJD4Q96KN9 370 aaPredicted RBP22.59■■□□□ 1.21
C4A-245ENST00000460841 CENPJQ9HC77 1338 aaPredicted RBP22.57■■□□□ 1.2
C4A-245ENST00000460841 FAM83GA6ND36 823 aa22.56■■□□□ 1.2
C4A-245ENST00000460841 CCDC61Q9Y6R9 512 aa22.56■■□□□ 1.2
C4A-245ENST00000460841 ABCA3Q99758 1704 aa22.55■■□□□ 1.2
C4A-245ENST00000460841 ALS2Q96Q42 1657 aa22.55■■□□□ 1.2
C4A-245ENST00000460841 ACEP12821 1306 aa22.54■■□□□ 1.2
C4A-245ENST00000460841 ITSN1Q15811 1721 aa22.54■■□□□ 1.2
C4A-245ENST00000460841 SRPK2P78362 688 aaKnown RBP22.53■■□□□ 1.2
C4A-245ENST00000460841 CABP2Q9NPB3 220 aa22.53■■□□□ 1.2
C4A-245ENST00000460841 SRCAPQ6ZRS2 3230 aa22.52■■□□□ 1.2
C4A-245ENST00000460841 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.52■■□□□ 1.2
C4A-245ENST00000460841 PLEKHG3A1L390 1219 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms