RNA–Protein interactions for RNA: ENST00000460828.5

PCMT1-204, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 5

Gene PCMT1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-204ENST00000460828 HFM1A2PYH4 1435 aa25.72■■□□□ 1.71
PCMT1-204ENST00000460828 NPHP3Q7Z494 1330 aa25.72■■□□□ 1.71
PCMT1-204ENST00000460828 CCDC125Q86Z20 511 aa25.72■■□□□ 1.71
PCMT1-204ENST00000460828 VGFO15240 615 aaPredicted RBP25.71■■□□□ 1.71
PCMT1-204ENST00000460828 ESCO1Q5FWF5 840 aa25.7■■□□□ 1.7
PCMT1-204ENST00000460828 CDC42BPGQ6DT37 1551 aa25.69■■□□□ 1.7
PCMT1-204ENST00000460828 BCL9LQ86UU0 1499 aa25.67■■□□□ 1.7
PCMT1-204ENST00000460828 PRAG1Q86YV5 1406 aa25.67■■□□□ 1.7
PCMT1-204ENST00000460828 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.67■■□□□ 1.7
PCMT1-204ENST00000460828 PXDNQ92626 1479 aa25.66■■□□□ 1.7
PCMT1-204ENST00000460828 XPCQ01831 940 aaPredicted RBP25.66■■□□□ 1.7
PCMT1-204ENST00000460828 GJD4Q96KN9 370 aaPredicted RBP25.66■■□□□ 1.7
PCMT1-204ENST00000460828 PPLO60437 1756 aa25.64■■□□□ 1.7
PCMT1-204ENST00000460828 LRPPRCP42704 1394 aaKnown RBP25.63■■□□□ 1.69
PCMT1-204ENST00000460828 BLMP54132 1417 aaPredicted RBP25.62■■□□□ 1.69
PCMT1-204ENST00000460828 FOXO3O43524 673 aa25.61■■□□□ 1.69
PCMT1-204ENST00000460828 SF3B2Q13435 895 aaKnown RBP25.6■■□□□ 1.69
PCMT1-204ENST00000460828 RPGRIP1LQ68CZ1 1315 aa25.6■■□□□ 1.69
PCMT1-204ENST00000460828 RALGAPBQ86X10 1494 aa25.6■■□□□ 1.69
PCMT1-204ENST00000460828 GLI3P10071 1580 aa25.59■■□□□ 1.69
PCMT1-204ENST00000460828 NAIPQ13075 1403 aa25.58■■□□□ 1.69
PCMT1-204ENST00000460828 NUTM2FA1L443 756 aa25.58■■□□□ 1.69
PCMT1-204ENST00000460828 PPARGC1BQ86YN6 1023 aaKnown RBP25.57■■□□□ 1.68
PCMT1-204ENST00000460828 UNC5CLQ8IV45 518 aa25.57■■□□□ 1.68
PCMT1-204ENST00000460828 BRWD3Q6RI45 1802 aa25.57■■□□□ 1.68
PCMT1-204ENST00000460828 USP32Q8NFA0 1604 aa25.55■■□□□ 1.68
PCMT1-204ENST00000460828 HAP1P54257 671 aaPredicted RBP25.55■■□□□ 1.68
PCMT1-204ENST00000460828 KIF1AQ12756 1690 aa25.55■■□□□ 1.68
PCMT1-204ENST00000460828 SLIT2O94813 1529 aa25.53■■□□□ 1.68
PCMT1-204ENST00000460828 DEFB132Q7Z7B7 95 aa25.53■■□□□ 1.68
PCMT1-204ENST00000460828 STK26Q9P289 416 aa25.52■■□□□ 1.68
PCMT1-204ENST00000460828 CCDC144AA2RUR9 1427 aa25.51■■□□□ 1.67
PCMT1-204ENST00000460828 LRP5O75197 1615 aa25.51■■□□□ 1.67
PCMT1-204ENST00000460828 FMN2Q9NZ56 1722 aa25.51■■□□□ 1.67
PCMT1-204ENST00000460828 KNDC1Q76NI1 1749 aa25.49■■□□□ 1.67
PCMT1-204ENST00000460828 PLCH1Q4KWH8 1693 aa25.49■■□□□ 1.67
PCMT1-204ENST00000460828 CCDC9Q9Y3X0 531 aaKnown RBP25.49■■□□□ 1.67
PCMT1-204ENST00000460828 SPATA31A3Q5VYP0 1347 aa25.48■■□□□ 1.67
PCMT1-204ENST00000460828 PLEKHG5O94827 1062 aa25.48■■□□□ 1.67
PCMT1-204ENST00000460828 WAPLQ7Z5K2 1190 aa25.48■■□□□ 1.67
PCMT1-204ENST00000460828 SLC4A1APQ9BWU0 796 aaKnown RBP25.48■■□□□ 1.67
PCMT1-204ENST00000460828 RRBP1Q9P2E9 1410 aaKnown RBP25.47■■□□□ 1.67
PCMT1-204ENST00000460828 SEPT12Q8IYM1 358 aa25.47■■□□□ 1.67
PCMT1-204ENST00000460828 TECPR2O15040 1411 aa25.46■■□□□ 1.67
PCMT1-204ENST00000460828 A0A0G2JS52 829 aa25.45■■□□□ 1.66
PCMT1-204ENST00000460828 MYT1Q01538 1121 aa25.45■■□□□ 1.66
PCMT1-204ENST00000460828 NWD2Q9ULI1 1742 aa25.45■■□□□ 1.66
PCMT1-204ENST00000460828 IFT172Q9UG01 1749 aa25.44■■□□□ 1.66
PCMT1-204ENST00000460828 KRT28Q7Z3Y7 464 aa25.43■■□□□ 1.66
PCMT1-204ENST00000460828 TNS3Q68CZ2 1445 aa25.43■■□□□ 1.66
PCMT1-204ENST00000460828 PLEKHH1Q9ULM0 1364 aa25.43■■□□□ 1.66
PCMT1-204ENST00000460828 ADGRF5Q8IZF2 1346 aa25.42■■□□□ 1.66
PCMT1-204ENST00000460828 ABCA3Q99758 1704 aa25.41■■□□□ 1.66
PCMT1-204ENST00000460828 VPS72Q15906 364 aa25.41■■□□□ 1.66
PCMT1-204ENST00000460828 KRT27Q7Z3Y8 459 aa25.41■■□□□ 1.66
PCMT1-204ENST00000460828 LMOD2Q6P5Q4 547 aa25.4■■□□□ 1.66
PCMT1-204ENST00000460828 RGPD8O14715 1765 aaPredicted RBP25.39■■□□□ 1.66
PCMT1-204ENST00000460828 BAG6P46379 1132 aa25.39■■□□□ 1.66
PCMT1-204ENST00000460828 PSME1Q06323 249 aa25.39■■□□□ 1.66
PCMT1-204ENST00000460828 RGL3Q3MIN7 710 aa25.39■■□□□ 1.66
PCMT1-204ENST00000460828 PSDA5PKW4 1024 aaPredicted RBP25.38■■□□□ 1.65
PCMT1-204ENST00000460828 CABLES1Q8TDN4 633 aa25.38■■□□□ 1.65
PCMT1-204ENST00000460828 ABCC11Q96J66 1382 aa25.37■■□□□ 1.65
PCMT1-204ENST00000460828 TMEM132EQ6IEE7 984 aa25.37■■□□□ 1.65
PCMT1-204ENST00000460828 ANKRD30BQ9BXX2 1392 aa25.36■■□□□ 1.65
PCMT1-204ENST00000460828 PHF8Q9UPP1 1060 aa25.35■■□□□ 1.65
PCMT1-204ENST00000460828 YTHDC2Q9H6S0 1430 aaKnown RBP25.35■■□□□ 1.65
PCMT1-204ENST00000460828 ARHGEF10O15013 1369 aa25.33■■□□□ 1.65
PCMT1-204ENST00000460828 RGPD1P0DJD0 1748 aa25.32■■□□□ 1.64
PCMT1-204ENST00000460828 PIK3C2GO75747 1445 aa25.32■■□□□ 1.64
PCMT1-204ENST00000460828 NRAPQ86VF7 1730 aa25.31■■□□□ 1.64
PCMT1-204ENST00000460828 SBNO1A3KN83 1393 aa25.31■■□□□ 1.64
PCMT1-204ENST00000460828 NRXN1Q9ULB1 1477 aa25.3■■□□□ 1.64
PCMT1-204ENST00000460828 ONECUT3O60422 494 aaPredicted RBP25.29■■□□□ 1.64
PCMT1-204ENST00000460828 HRCP23327 699 aa25.29■■□□□ 1.64
PCMT1-204ENST00000460828 FAM98CQ17RN3 349 aaKnown RBP25.29■■□□□ 1.64
PCMT1-204ENST00000460828 SPATA31E1Q6ZUB1 1445 aa25.29■■□□□ 1.64
PCMT1-204ENST00000460828 SAFB2Q14151 953 aaKnown RBP eCLIP25.25■■□□□ 1.63
PCMT1-204ENST00000460828 COL14A1Q05707 1796 aaKnown RBP25.24■■□□□ 1.63
PCMT1-204ENST00000460828 FAM83GA6ND36 823 aa25.24■■□□□ 1.63
PCMT1-204ENST00000460828 EN1Q05925 392 aaPredicted RBP25.24■■□□□ 1.63
PCMT1-204ENST00000460828 PMFBP1Q8TBY8 1022 aa25.23■■□□□ 1.63
PCMT1-204ENST00000460828 BTG4Q9NY30 223 aa25.23■■□□□ 1.63
PCMT1-204ENST00000460828 DHX57Q6P158 1386 aaKnown RBP25.22■■□□□ 1.63
PCMT1-204ENST00000460828 R3HDM1Q15032 1099 aaKnown RBP25.21■■□□□ 1.63
PCMT1-204ENST00000460828 SIRT1Q96EB6 747 aa25.21■■□□□ 1.63
PCMT1-204ENST00000460828 ADGRB2O60241 1585 aa25.21■■□□□ 1.63
PCMT1-204ENST00000460828 TNS1Q9HBL0 1735 aaKnown RBP25.2■■□□□ 1.62
PCMT1-204ENST00000460828 TRPM3Q9HCF6 1732 aaPredicted RBP25.2■■□□□ 1.62
PCMT1-204ENST00000460828 FAM182BQ5T319 152 aa25.19■■□□□ 1.62
PCMT1-204ENST00000460828 PRAM1Q96QH2 718 aa25.19■■□□□ 1.62
PCMT1-204ENST00000460828 ANKARQ7Z5J8 1434 aa25.19■■□□□ 1.62
PCMT1-204ENST00000460828 POGKQ9P215 609 aa25.18■■□□□ 1.62
PCMT1-204ENST00000460828 GPRASP1Q5JY77 1395 aa25.17■■□□□ 1.62
PCMT1-204ENST00000460828 ALS2Q96Q42 1657 aa25.17■■□□□ 1.62
PCMT1-204ENST00000460828 C14orf93Q9H972 538 aaKnown RBP25.15■■□□□ 1.62
PCMT1-204ENST00000460828 THSD7AQ9UPZ6 1657 aa25.14■■□□□ 1.62
PCMT1-204ENST00000460828 CFAP70Q5T0N1 1121 aa25.14■■□□□ 1.62
PCMT1-204ENST00000460828 DISP2A7MBM2 1401 aa25.13■■□□□ 1.61
PCMT1-204ENST00000460828 MPHOSPH9Q99550 1183 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms