RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 GDF9O60383 454 aa5.78□□□□□ -1.48
HPS3-203ENST00000460822 USP46P62068 366 aa5.78□□□□□ -1.48
HPS3-203ENST00000460822 ANKLE1Q8NAG6 615 aa5.78□□□□□ -1.48
HPS3-203ENST00000460822 SLC24A3Q9HC58 644 aa5.78□□□□□ -1.48
HPS3-203ENST00000460822 S1PR4O95977 384 aa5.77□□□□□ -1.49
HPS3-203ENST00000460822 Q3C1V9 767 aa5.77□□□□□ -1.49
HPS3-203ENST00000460822 AK7Q96M32 723 aa5.77□□□□□ -1.49
HPS3-203ENST00000460822 FAM217BQ9NTX9 383 aaPredicted RBP5.77□□□□□ -1.49
HPS3-203ENST00000460822 STK17AQ9UEE5 414 aa5.77□□□□□ -1.49
HPS3-203ENST00000460822 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
HPS3-203ENST00000460822 KRTAP4-6Q9BYQ5 205 aa5.76□□□□□ -1.49
HPS3-203ENST00000460822 AAASQ9NRG9 546 aa5.76□□□□□ -1.49
HPS3-203ENST00000460822 SLC27A5Q9Y2P5 690 aa5.76□□□□□ -1.49
HPS3-203ENST00000460822 FAM187AA6NFU0 413 aa5.76□□□□□ -1.49
HPS3-203ENST00000460822 SSTR3P32745 418 aaPredicted RBP5.76□□□□□ -1.49
HPS3-203ENST00000460822 LIAT1Q6ZQX7 453 aa5.76□□□□□ -1.49
HPS3-203ENST00000460822 ZNF697Q5TEC3 545 aa5.75□□□□□ -1.49
HPS3-203ENST00000460822 PPEF1O14829 653 aaPredicted RBP5.75□□□□□ -1.49
HPS3-203ENST00000460822 AMHR2Q16671 573 aa5.75□□□□□ -1.49
HPS3-203ENST00000460822 SALL2Q9Y467 1007 aaPredicted RBP5.75□□□□□ -1.49
HPS3-203ENST00000460822 TRIM66O15016 1216 aa5.73□□□□□ -1.49
HPS3-203ENST00000460822 WIPF1O43516 503 aa5.73□□□□□ -1.49
HPS3-203ENST00000460822 WFS1O76024 890 aa5.73□□□□□ -1.49
HPS3-203ENST00000460822 BRICD5Q6PL45 260 aa5.73□□□□□ -1.49
HPS3-203ENST00000460822 GIGYF2Q6Y7W6 1299 aaKnown RBP5.73□□□□□ -1.49
HPS3-203ENST00000460822 CRIPAKQ8N1N5 446 aa5.73□□□□□ -1.49
HPS3-203ENST00000460822 HOXA2O43364 376 aa5.72□□□□□ -1.49
HPS3-203ENST00000460822 THAP11Q96EK4 314 aa5.72□□□□□ -1.49
HPS3-203ENST00000460822 REPIN1Q9BWE0 567 aaKnown RBP5.72□□□□□ -1.49
HPS3-203ENST00000460822 ST8SIA5O15466 376 aa5.71□□□□□ -1.49
HPS3-203ENST00000460822 INSM1Q01101 510 aaPredicted RBP5.71□□□□□ -1.49
HPS3-203ENST00000460822 DIXDC1Q155Q3 683 aa5.71□□□□□ -1.49
HPS3-203ENST00000460822 RNF19BQ6ZMZ0 732 aa5.71□□□□□ -1.49
HPS3-203ENST00000460822 ZBTB24O43167 697 aaPredicted RBP5.71□□□□□ -1.5
HPS3-203ENST00000460822 MSS51Q4VC12 460 aa5.71□□□□□ -1.5
HPS3-203ENST00000460822 USB1Q9BQ65 265 aaKnown RBP5.71□□□□□ -1.5
HPS3-203ENST00000460822 BEGAINQ9BUH8 593 aa5.71□□□□□ -1.5
HPS3-203ENST00000460822 TNFRSF10AO00220 468 aa5.7□□□□□ -1.5
HPS3-203ENST00000460822 AVPP01185 164 aa5.7□□□□□ -1.5
HPS3-203ENST00000460822 FDX1P10109 184 aa5.7□□□□□ -1.5
HPS3-203ENST00000460822 HOMEZQ8IX15 550 aa5.7□□□□□ -1.5
HPS3-203ENST00000460822 FAM160A2Q8N612 972 aaPredicted RBP5.7□□□□□ -1.5
HPS3-203ENST00000460822 FCF1Q9Y324 198 aaKnown RBP5.7□□□□□ -1.5
HPS3-203ENST00000460822 PDE4DQ08499 809 aa5.69□□□□□ -1.5
HPS3-203ENST00000460822 PARP9Q8IXQ6 854 aa5.69□□□□□ -1.5
HPS3-203ENST00000460822 SPIRE2Q8WWL2 714 aa5.69□□□□□ -1.5
HPS3-203ENST00000460822 C6orf229H3BNL8 230 aa5.69□□□□□ -1.5
HPS3-203ENST00000460822 GUCA2AQ02747 115 aa5.69□□□□□ -1.5
HPS3-203ENST00000460822 NFX1Q12986 1120 aaKnown RBP5.69□□□□□ -1.5
HPS3-203ENST00000460822 HLA-CQ95604 372 aa5.69□□□□□ -1.5
HPS3-203ENST00000460822 CD2BP2O95400 341 aaKnown RBP5.68□□□□□ -1.5
HPS3-203ENST00000460822 PRDM9Q9NQV7 894 aa5.68□□□□□ -1.5
HPS3-203ENST00000460822 PKD2L1Q9P0L9 805 aa5.68□□□□□ -1.5
HPS3-203ENST00000460822 SUPT5HO00267 1087 aaKnown RBP5.67□□□□□ -1.5
HPS3-203ENST00000460822 RPIAP49247 311 aa5.67□□□□□ -1.5
HPS3-203ENST00000460822 SMCPP49901 116 aaPredicted RBP5.67□□□□□ -1.5
HPS3-203ENST00000460822 CCDC24Q8N4L8 307 aa5.67□□□□□ -1.5
HPS3-203ENST00000460822 CTC1Q2NKJ3 1217 aa5.67□□□□□ -1.5
HPS3-203ENST00000460822 DACH1Q9UI36 760 aa5.67□□□□□ -1.5
HPS3-203ENST00000460822 MOXD2PA6NHM9 499 aa5.66□□□□□ -1.5
HPS3-203ENST00000460822 NDUFV2P19404 249 aa5.66□□□□□ -1.5
HPS3-203ENST00000460822 RETREG3Q86VR2 466 aa5.66□□□□□ -1.5
HPS3-203ENST00000460822 TBC1D2Q9BYX2 928 aa5.66□□□□□ -1.5
HPS3-203ENST00000460822 GPBP1L1Q9HC44 474 aaPredicted RBP5.66□□□□□ -1.5
HPS3-203ENST00000460822 GMPR2Q9P2T1 348 aaKnown RBP5.66□□□□□ -1.5
HPS3-203ENST00000460822 C11orf95C9JLR9 678 aaPredicted RBP5.66□□□□□ -1.5
HPS3-203ENST00000460822 MS4A1P11836 297 aa5.66□□□□□ -1.5
HPS3-203ENST00000460822 MMP16P51512 607 aa5.66□□□□□ -1.5
HPS3-203ENST00000460822 PLA2G2CQ5R387 149 aa5.66□□□□□ -1.5
HPS3-203ENST00000460822 SYMPKQ92797 1274 aaKnown RBP5.66□□□□□ -1.5
HPS3-203ENST00000460822 TOR4AQ9NXH8 423 aa5.66□□□□□ -1.5
HPS3-203ENST00000460822 AXIN1O15169 862 aa5.65□□□□□ -1.51
HPS3-203ENST00000460822 JUNDP17535 347 aa5.65□□□□□ -1.51
HPS3-203ENST00000460822 SPDYE5A6NIY4 337 aa5.64□□□□□ -1.51
HPS3-203ENST00000460822 DXOO77932 396 aaKnown RBP5.64□□□□□ -1.51
HPS3-203ENST00000460822 FOXC1Q12948 553 aa5.64□□□□□ -1.51
HPS3-203ENST00000460822 MTMR2Q13614 643 aa5.64□□□□□ -1.51
HPS3-203ENST00000460822 ATP1B4Q9UN42 357 aaPredicted RBP5.64□□□□□ -1.51
HPS3-203ENST00000460822 GJA5P36382 358 aa5.63□□□□□ -1.51
HPS3-203ENST00000460822 RIC3Q7Z5B4 369 aa5.63□□□□□ -1.51
HPS3-203ENST00000460822 PCDHGC3Q9UN70 934 aa5.63□□□□□ -1.51
HPS3-203ENST00000460822 RSBN1LQ6PCB5 846 aaPredicted RBP5.62□□□□□ -1.51
HPS3-203ENST00000460822 RSPH6AQ9H0K4 717 aa5.62□□□□□ -1.51
HPS3-203ENST00000460822 SPTLC1O15269 473 aa5.62□□□□□ -1.51
HPS3-203ENST00000460822 CSPP1Q1MSJ5 1256 aa5.62□□□□□ -1.51
HPS3-203ENST00000460822 PRR7Q8TB68 274 aa5.62□□□□□ -1.51
HPS3-203ENST00000460822 NUDT12Q9BQG2 462 aa5.62□□□□□ -1.51
HPS3-203ENST00000460822 ZBTB3Q9H5J0 574 aa5.62□□□□□ -1.51
HPS3-203ENST00000460822 NUTM2BA6NNL0 878 aaPredicted RBP5.61□□□□□ -1.51
HPS3-203ENST00000460822 NUTM2EB1AL46 878 aaPredicted RBP5.61□□□□□ -1.51
HPS3-203ENST00000460822 TERTO14746 1132 aaKnown RBP5.61□□□□□ -1.51
HPS3-203ENST00000460822 NUTM2DQ5VT03 806 aaPredicted RBP5.61□□□□□ -1.51
HPS3-203ENST00000460822 NUTM2AQ8IVF1 878 aaPredicted RBP5.61□□□□□ -1.51
HPS3-203ENST00000460822 CYP4X1Q8N118 509 aa5.61□□□□□ -1.51
HPS3-203ENST00000460822 IL27Q8NEV9 243 aa5.61□□□□□ -1.51
HPS3-203ENST00000460822 KDM4CQ9H3R0 1056 aa5.61□□□□□ -1.51
HPS3-203ENST00000460822 TRIM32Q13049 653 aa5.6□□□□□ -1.51
HPS3-203ENST00000460822 CCNYL3P0C7X3 344 aa5.6□□□□□ -1.51
HPS3-203ENST00000460822 LCE2CQ5TA81 110 aa5.6□□□□□ -1.51
HPS3-203ENST00000460822 PRPF38BQ5VTL8 546 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms