RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 FOXC1Q12948 553 aa7.04□□□□□ -1.28
SYPL1-203ENST00000460770 RNF19BQ6ZMZ0 732 aa7.04□□□□□ -1.28
SYPL1-203ENST00000460770 FAM217BQ9NTX9 383 aaPredicted RBP7.04□□□□□ -1.28
SYPL1-203ENST00000460770 HOXA2O43364 376 aa7.03□□□□□ -1.28
SYPL1-203ENST00000460770 MMP16P51512 607 aa7.03□□□□□ -1.28
SYPL1-203ENST00000460770 CYP4X1Q8N118 509 aa7.03□□□□□ -1.28
SYPL1-203ENST00000460770 LCE2BO14633 110 aa7.02□□□□□ -1.29
SYPL1-203ENST00000460770 TTLL12Q14166 644 aaPredicted RBP7.02□□□□□ -1.29
SYPL1-203ENST00000460770 PRDM9Q9NQV7 894 aa7.02□□□□□ -1.29
SYPL1-203ENST00000460770 MYT1Q01538 1121 aa7.01□□□□□ -1.29
SYPL1-203ENST00000460770 BARGINQ6ZT62 677 aa7.01□□□□□ -1.29
SYPL1-203ENST00000460770 REPIN1Q9BWE0 567 aaKnown RBP7.01□□□□□ -1.29
SYPL1-203ENST00000460770 TTC24A2A3L6 582 aaPredicted RBP7□□□□□ -1.29
SYPL1-203ENST00000460770 DXOO77932 396 aaKnown RBP7□□□□□ -1.29
SYPL1-203ENST00000460770 DIXDC1Q155Q3 683 aa7□□□□□ -1.29
SYPL1-203ENST00000460770 PKD2L1Q9P0L9 805 aa7□□□□□ -1.29
SYPL1-203ENST00000460770 ZMYND10O75800 440 aa6.99□□□□□ -1.29
SYPL1-203ENST00000460770 SSTR3P32745 418 aaPredicted RBP6.99□□□□□ -1.29
SYPL1-203ENST00000460770 TRIM32Q13049 653 aa6.99□□□□□ -1.29
SYPL1-203ENST00000460770 WNT7AO00755 349 aa6.98□□□□□ -1.29
SYPL1-203ENST00000460770 CTC1Q2NKJ3 1217 aa6.98□□□□□ -1.29
SYPL1-203ENST00000460770 RETREG3Q86VR2 466 aa6.98□□□□□ -1.29
SYPL1-203ENST00000460770 CCDC24Q8N4L8 307 aa6.98□□□□□ -1.29
SYPL1-203ENST00000460770 FDX1P10109 184 aa6.97□□□□□ -1.29
SYPL1-203ENST00000460770 JUNDP17535 347 aa6.97□□□□□ -1.29
SYPL1-203ENST00000460770 AMHR2Q16671 573 aa6.97□□□□□ -1.29
SYPL1-203ENST00000460770 TOR4AQ9NXH8 423 aa6.97□□□□□ -1.29
SYPL1-203ENST00000460770 SPDYE5A6NIY4 337 aa6.96□□□□□ -1.3
SYPL1-203ENST00000460770 C6orf229H3BNL8 230 aa6.96□□□□□ -1.3
SYPL1-203ENST00000460770 WNT7BP56706 349 aa6.96□□□□□ -1.3
SYPL1-203ENST00000460770 CRIPAKQ8N1N5 446 aa6.96□□□□□ -1.3
SYPL1-203ENST00000460770 SNIP1Q8TAD8 396 aaKnown RBP6.96□□□□□ -1.3
SYPL1-203ENST00000460770 ZC3H15Q8WU90 426 aaKnown RBP6.96□□□□□ -1.3
SYPL1-203ENST00000460770 AXIN1O15169 862 aa6.94□□□□□ -1.3
SYPL1-203ENST00000460770 AVPP01185 164 aa6.94□□□□□ -1.3
SYPL1-203ENST00000460770 MS4A1P11836 297 aa6.94□□□□□ -1.3
SYPL1-203ENST00000460770 GIGYF2Q6Y7W6 1299 aaKnown RBP6.94□□□□□ -1.3
SYPL1-203ENST00000460770 HLA-CQ95604 372 aa6.94□□□□□ -1.3
SYPL1-203ENST00000460770 NUDT12Q9BQG2 462 aa6.94□□□□□ -1.3
SYPL1-203ENST00000460770 AAASQ9NRG9 546 aa6.94□□□□□ -1.3
SYPL1-203ENST00000460770 GJA5P36382 358 aa6.93□□□□□ -1.3
SYPL1-203ENST00000460770 GUCA2AQ02747 115 aa6.93□□□□□ -1.3
SYPL1-203ENST00000460770 SMCPP49901 116 aaPredicted RBP6.92□□□□□ -1.3
SYPL1-203ENST00000460770 SPIRE2Q8WWL2 714 aa6.92□□□□□ -1.3
SYPL1-203ENST00000460770 MRGPRX2Q96LB1 330 aa6.92□□□□□ -1.3
SYPL1-203ENST00000460770 AK7Q96M32 723 aa6.92□□□□□ -1.3
SYPL1-203ENST00000460770 BEGAINQ9BUH8 593 aa6.92□□□□□ -1.3
SYPL1-203ENST00000460770 ST8SIA5O15466 376 aa6.91□□□□□ -1.3
SYPL1-203ENST00000460770 CCNYL3P0C7X3 344 aa6.91□□□□□ -1.3
SYPL1-203ENST00000460770 MTMR2Q13614 643 aa6.91□□□□□ -1.3
SYPL1-203ENST00000460770 RC3H1Q5TC82 1133 aaKnown RBP6.91□□□□□ -1.3
SYPL1-203ENST00000460770 PTPRNQ16849 979 aa6.9□□□□□ -1.3
SYPL1-203ENST00000460770 DESI1Q6ICB0 168 aa6.9□□□□□ -1.3
SYPL1-203ENST00000460770 SYMPKQ92797 1274 aaKnown RBP6.9□□□□□ -1.3
SYPL1-203ENST00000460770 EHBP1Q8NDI1 1231 aa6.89□□□□□ -1.31
SYPL1-203ENST00000460770 ZNF775Q96BV0 537 aaPredicted RBP6.89□□□□□ -1.31
SYPL1-203ENST00000460770 PCDHGC3Q9UN70 934 aa6.89□□□□□ -1.31
SYPL1-203ENST00000460770 MOXD2PA6NHM9 499 aa6.88□□□□□ -1.31
SYPL1-203ENST00000460770 C11orf95C9JLR9 678 aaPredicted RBP6.88□□□□□ -1.31
SYPL1-203ENST00000460770 TRIM66O15016 1216 aa6.88□□□□□ -1.31
SYPL1-203ENST00000460770 SMPD1P17405 629 aa6.88□□□□□ -1.31
SYPL1-203ENST00000460770 PRR7Q8TB68 274 aa6.88□□□□□ -1.31
SYPL1-203ENST00000460770 TBC1D2Q9BYX2 928 aa6.88□□□□□ -1.31
SYPL1-203ENST00000460770 SENP2Q9HC62 589 aa6.88□□□□□ -1.31
SYPL1-203ENST00000460770 NDUFV2P19404 249 aa6.87□□□□□ -1.31
SYPL1-203ENST00000460770 PARP9Q8IXQ6 854 aa6.87□□□□□ -1.31
SYPL1-203ENST00000460770 EVA1BQ9NVM1 165 aa6.87□□□□□ -1.31
SYPL1-203ENST00000460770 ALDH1A1P00352 501 aa6.86□□□□□ -1.31
SYPL1-203ENST00000460770 ZBTB3Q9H5J0 574 aa6.86□□□□□ -1.31
SYPL1-203ENST00000460770 WASF2Q9Y6W5 498 aa6.86□□□□□ -1.31
SYPL1-203ENST00000460770 POTECB2RU33 542 aa6.85□□□□□ -1.31
SYPL1-203ENST00000460770 J3QL48 77 aa6.85□□□□□ -1.31
SYPL1-203ENST00000460770 KCNH2Q12809 1159 aa6.85□□□□□ -1.31
SYPL1-203ENST00000460770 PRPF38BQ5VTL8 546 aaKnown RBP6.85□□□□□ -1.31
SYPL1-203ENST00000460770 RSBN1LQ6PCB5 846 aaPredicted RBP6.85□□□□□ -1.31
SYPL1-203ENST00000460770 KIFC2Q96AC6 838 aa6.85□□□□□ -1.31
SYPL1-203ENST00000460770 UNC93B1Q9H1C4 597 aa6.85□□□□□ -1.31
SYPL1-203ENST00000460770 PLEKHG3A1L390 1219 aa6.84□□□□□ -1.31
SYPL1-203ENST00000460770 SPTLC1O15269 473 aa6.84□□□□□ -1.31
SYPL1-203ENST00000460770 SKOR1P84550 965 aa6.84□□□□□ -1.31
SYPL1-203ENST00000460770 CTHP32929 405 aa6.83□□□□□ -1.32
SYPL1-203ENST00000460770 PTCRAQ6ISU1 281 aaPredicted RBP6.83□□□□□ -1.32
SYPL1-203ENST00000460770 RIC3Q7Z5B4 369 aa6.83□□□□□ -1.32
SYPL1-203ENST00000460770 ATP13A2Q9NQ11 1180 aa6.83□□□□□ -1.32
SYPL1-203ENST00000460770 VARSP26640 1264 aaKnown RBP6.82□□□□□ -1.32
SYPL1-203ENST00000460770 SH3BP2P78314 561 aa6.82□□□□□ -1.32
SYPL1-203ENST00000460770 PDE4DQ08499 809 aa6.82□□□□□ -1.32
SYPL1-203ENST00000460770 LYPD8Q6UX82 237 aa6.82□□□□□ -1.32
SYPL1-203ENST00000460770 HPS1Q92902 700 aa6.82□□□□□ -1.32
SYPL1-203ENST00000460770 RSPH6AQ9H0K4 717 aa6.82□□□□□ -1.32
SYPL1-203ENST00000460770 GMPR2Q9P2T1 348 aaKnown RBP6.82□□□□□ -1.32
SYPL1-203ENST00000460770 NUTM2BA6NNL0 878 aaPredicted RBP6.81□□□□□ -1.32
SYPL1-203ENST00000460770 NUTM2EB1AL46 878 aaPredicted RBP6.81□□□□□ -1.32
SYPL1-203ENST00000460770 NUTM2DQ5VT03 806 aaPredicted RBP6.81□□□□□ -1.32
SYPL1-203ENST00000460770 NUTM2AQ8IVF1 878 aaPredicted RBP6.81□□□□□ -1.32
SYPL1-203ENST00000460770 ZNF511Q8NB15 262 aa6.81□□□□□ -1.32
SYPL1-203ENST00000460770 DACH1Q9UI36 760 aa6.81□□□□□ -1.32
SYPL1-203ENST00000460770 SIAH2O43255 324 aa6.8□□□□□ -1.32
SYPL1-203ENST00000460770 HRCP23327 699 aa6.8□□□□□ -1.32
SYPL1-203ENST00000460770 TUSC1Q2TAM9 212 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms