RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 PRAM1Q96QH2 718 aa25.6■■□□□ 1.69
PLOD3-209ENST00000460475 C1orf167Q5SNV9 1468 aa25.6■■□□□ 1.69
PLOD3-209ENST00000460475 TRAK1Q9UPV9 953 aa25.59■■□□□ 1.69
PLOD3-209ENST00000460475 AHDC1Q5TGY3 1603 aaPredicted RBP25.58■■□□□ 1.69
PLOD3-209ENST00000460475 NBPF1Q3BBV0 1214 aa25.57■■□□□ 1.68
PLOD3-209ENST00000460475 POGKQ9P215 609 aa25.56■■□□□ 1.68
PLOD3-209ENST00000460475 PHLPP1O60346 1717 aa25.56■■□□□ 1.68
PLOD3-209ENST00000460475 ARHGEF28Q8N1W1 1705 aaKnown RBP25.54■■□□□ 1.68
PLOD3-209ENST00000460475 CLSPNQ9HAW4 1339 aa25.54■■□□□ 1.68
PLOD3-209ENST00000460475 TRPM1Q7Z4N2 1603 aa25.53■■□□□ 1.68
PLOD3-209ENST00000460475 FMN2Q9NZ56 1722 aa25.53■■□□□ 1.68
PLOD3-209ENST00000460475 TONSLQ96HA7 1378 aa25.53■■□□□ 1.68
PLOD3-209ENST00000460475 COL16A1Q07092 1604 aaPredicted RBP25.52■■□□□ 1.68
PLOD3-209ENST00000460475 NHSL1Q5SYE7 1610 aa25.52■■□□□ 1.68
PLOD3-209ENST00000460475 ADGRB2O60241 1585 aa25.52■■□□□ 1.68
PLOD3-209ENST00000460475 SAFB2Q14151 953 aaKnown RBP eCLIP25.51■■□□□ 1.67
PLOD3-209ENST00000460475 ORAI2Q96SN7 254 aa25.5■■□□□ 1.67
PLOD3-209ENST00000460475 NBPF8Q3BBV2 869 aa25.49■■□□□ 1.67
PLOD3-209ENST00000460475 GPRASP1Q5JY77 1395 aa25.44■■□□□ 1.66
PLOD3-209ENST00000460475 JCADQ9P266 1359 aa25.44■■□□□ 1.66
PLOD3-209ENST00000460475 ESCO1Q5FWF5 840 aa25.44■■□□□ 1.66
PLOD3-209ENST00000460475 MINK1Q8N4C8 1332 aaPredicted RBP25.43■■□□□ 1.66
PLOD3-209ENST00000460475 RGPD8O14715 1765 aaPredicted RBP25.42■■□□□ 1.66
PLOD3-209ENST00000460475 NUTM2FA1L443 756 aa25.42■■□□□ 1.66
PLOD3-209ENST00000460475 ANKARQ7Z5J8 1434 aa25.42■■□□□ 1.66
PLOD3-209ENST00000460475 ROCK2O75116 1388 aaKnown RBP25.42■■□□□ 1.66
PLOD3-209ENST00000460475 MED1Q15648 1581 aaPredicted RBP25.41■■□□□ 1.66
PLOD3-209ENST00000460475 WASLO00401 505 aaPredicted RBP25.41■■□□□ 1.66
PLOD3-209ENST00000460475 DDX17Q92841 729 aaKnown RBP25.41■■□□□ 1.66
PLOD3-209ENST00000460475 HIRIP3Q9BW71 556 aaPredicted RBP25.41■■□□□ 1.66
PLOD3-209ENST00000460475 TIMELESSQ9UNS1 1208 aa25.41■■□□□ 1.66
PLOD3-209ENST00000460475 SOS2Q07890 1332 aaPredicted RBP25.4■■□□□ 1.66
PLOD3-209ENST00000460475 SHPRHQ149N8 1683 aa25.39■■□□□ 1.66
PLOD3-209ENST00000460475 USP32Q8NFA0 1604 aa25.39■■□□□ 1.66
PLOD3-209ENST00000460475 LRRC59Q96AG4 307 aaKnown RBP25.39■■□□□ 1.66
PLOD3-209ENST00000460475 EIF3AQ14152 1382 aaKnown RBP25.39■■□□□ 1.65
PLOD3-209ENST00000460475 RALGAPBQ86X10 1494 aa25.39■■□□□ 1.65
PLOD3-209ENST00000460475 KIF1AQ12756 1690 aa25.38■■□□□ 1.65
PLOD3-209ENST00000460475 NPHP3Q7Z494 1330 aa25.37■■□□□ 1.65
PLOD3-209ENST00000460475 CENPJQ9HC77 1338 aaPredicted RBP25.37■■□□□ 1.65
PLOD3-209ENST00000460475 TULP4Q9NRJ4 1543 aa25.37■■□□□ 1.65
PLOD3-209ENST00000460475 DISP3Q9P2K9 1392 aa25.36■■□□□ 1.65
PLOD3-209ENST00000460475 FOXO3O43524 673 aa25.35■■□□□ 1.65
PLOD3-209ENST00000460475 SPATA31A6Q5VVP1 1343 aa25.35■■□□□ 1.65
PLOD3-209ENST00000460475 PXDNQ92626 1479 aa25.34■■□□□ 1.65
PLOD3-209ENST00000460475 PHF8Q9UPP1 1060 aa25.34■■□□□ 1.65
PLOD3-209ENST00000460475 PRR36Q9H6K5 1346 aa25.34■■□□□ 1.65
PLOD3-209ENST00000460475 CCER1Q8TC90 406 aaPredicted RBP25.33■■□□□ 1.65
PLOD3-209ENST00000460475 QRICH2Q9H0J4 1663 aa25.32■■□□□ 1.64
PLOD3-209ENST00000460475 CDK19Q9BWU1 502 aa25.32■■□□□ 1.64
PLOD3-209ENST00000460475 CARD11Q9BXL7 1154 aa25.31■■□□□ 1.64
PLOD3-209ENST00000460475 PNPLA6Q8IY17 1366 aa25.3■■□□□ 1.64
PLOD3-209ENST00000460475 ATP7BP35670 1465 aa25.29■■□□□ 1.64
PLOD3-209ENST00000460475 NUDT16Q96DE0 195 aaKnown RBP25.28■■□□□ 1.64
PLOD3-209ENST00000460475 ITSN1Q15811 1721 aa25.26■■□□□ 1.63
PLOD3-209ENST00000460475 XPCQ01831 940 aaPredicted RBP25.25■■□□□ 1.63
PLOD3-209ENST00000460475 KRT28Q7Z3Y7 464 aa25.25■■□□□ 1.63
PLOD3-209ENST00000460475 LRP6O75581 1613 aa25.25■■□□□ 1.63
PLOD3-209ENST00000460475 SBNO2Q9Y2G9 1366 aa25.24■■□□□ 1.63
PLOD3-209ENST00000460475 PMFBP1Q8TBY8 1022 aa25.24■■□□□ 1.63
PLOD3-209ENST00000460475 TOPAZ1Q8N9V7 1692 aa25.23■■□□□ 1.63
PLOD3-209ENST00000460475 COL22A1Q8NFW1 1626 aaPredicted RBP25.23■■□□□ 1.63
PLOD3-209ENST00000460475 CCDC61Q9Y6R9 512 aa25.23■■□□□ 1.63
PLOD3-209ENST00000460475 SPATA31A3Q5VYP0 1347 aa25.22■■□□□ 1.63
PLOD3-209ENST00000460475 PSME1Q06323 249 aa25.22■■□□□ 1.63
PLOD3-209ENST00000460475 SBNO1A3KN83 1393 aa25.2■■□□□ 1.63
PLOD3-209ENST00000460475 EVC2Q86UK5 1308 aa25.2■■□□□ 1.62
PLOD3-209ENST00000460475 PLEKHG3A1L390 1219 aa25.2■■□□□ 1.62
PLOD3-209ENST00000460475 PHF23Q9BUL5 403 aaPredicted RBP25.2■■□□□ 1.62
PLOD3-209ENST00000460475 SRPK2P78362 688 aaKnown RBP25.19■■□□□ 1.62
PLOD3-209ENST00000460475 CABP2Q9NPB3 220 aa25.18■■□□□ 1.62
PLOD3-209ENST00000460475 RGS17Q9UGC6 210 aaPredicted RBP25.18■■□□□ 1.62
PLOD3-209ENST00000460475 POLR3AO14802 1390 aaPredicted RBP25.18■■□□□ 1.62
PLOD3-209ENST00000460475 NGDNQ8NEJ9 315 aaKnown RBP25.17■■□□□ 1.62
PLOD3-209ENST00000460475 TNS3Q68CZ2 1445 aa25.17■■□□□ 1.62
PLOD3-209ENST00000460475 TRPM3Q9HCF6 1732 aaPredicted RBP25.17■■□□□ 1.62
PLOD3-209ENST00000460475 NUTM2BA6NNL0 878 aaPredicted RBP25.16■■□□□ 1.62
PLOD3-209ENST00000460475 NUTM2EB1AL46 878 aaPredicted RBP25.16■■□□□ 1.62
PLOD3-209ENST00000460475 NUTM2AQ8IVF1 878 aaPredicted RBP25.16■■□□□ 1.62
PLOD3-209ENST00000460475 ACEP12821 1306 aa25.12■■□□□ 1.61
PLOD3-209ENST00000460475 PPIP5K1Q6PFW1 1433 aa25.12■■□□□ 1.61
PLOD3-209ENST00000460475 MEX3CQ5U5Q3 659 aaKnown RBP25.12■■□□□ 1.61
PLOD3-209ENST00000460475 ARHGEF10O15013 1369 aa25.12■■□□□ 1.61
PLOD3-209ENST00000460475 ALS2Q96Q42 1657 aa25.11■■□□□ 1.61
PLOD3-209ENST00000460475 ST20-MTHFSA0A0A6YYL1 179 aa25.11■■□□□ 1.61
PLOD3-209ENST00000460475 ILDR2Q71H61 639 aa25.11■■□□□ 1.61
PLOD3-209ENST00000460475 TESK2Q96S53 571 aa25.11■■□□□ 1.61
PLOD3-209ENST00000460475 SLC24A1O60721 1099 aa25.09■■□□□ 1.61
PLOD3-209ENST00000460475 ATAD2Q6PL18 1390 aa25.08■■□□□ 1.61
PLOD3-209ENST00000460475 USP47Q96K76 1375 aa25.08■■□□□ 1.61
PLOD3-209ENST00000460475 PUS7Q96PZ0 661 aaKnown RBP25.08■■□□□ 1.61
PLOD3-209ENST00000460475 CABP1Q9NZU7 370 aa25.08■■□□□ 1.61
PLOD3-209ENST00000460475 BRD4O60885 1362 aaPredicted RBP25.05■■□□□ 1.6
PLOD3-209ENST00000460475 ADAMTS2O95450 1211 aa25.05■■□□□ 1.6
PLOD3-209ENST00000460475 MARF1Q9Y4F3 1742 aaKnown RBP25.05■■□□□ 1.6
PLOD3-209ENST00000460475 LMOD2Q6P5Q4 547 aa25.04■■□□□ 1.6
PLOD3-209ENST00000460475 POTEAQ6S8J7 498 aa25.04■■□□□ 1.6
PLOD3-209ENST00000460475 ZNF772Q68DY9 489 aaPredicted RBP25.03■■□□□ 1.6
PLOD3-209ENST00000460475 C8orf37Q96NL8 207 aa25.03■■□□□ 1.6
PLOD3-209ENST00000460475 ABCA3Q99758 1704 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms