RNA–Protein interactions for RNA: ENST00000460345.1

TNC-204, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-204ENST00000460345 CHD2O14647 1828 aaKnown RBP13.65□□□□□ -0.22
TNC-204ENST00000460345 CDCA8Q53HL2 280 aa13.65□□□□□ -0.22
TNC-204ENST00000460345 CCDC7Q96M83 1385 aa13.65□□□□□ -0.22
TNC-204ENST00000460345 DISP3Q9P2K9 1392 aa13.65□□□□□ -0.22
TNC-204ENST00000460345 SBNO2Q9Y2G9 1366 aa13.65□□□□□ -0.22
TNC-204ENST00000460345 QRICH2Q9H0J4 1663 aa13.65□□□□□ -0.22
TNC-204ENST00000460345 EVC2Q86UK5 1308 aa13.64□□□□□ -0.23
TNC-204ENST00000460345 PTCH1Q13635 1447 aa13.64□□□□□ -0.23
TNC-204ENST00000460345 PROSER2Q86WR7 435 aaPredicted RBP13.64□□□□□ -0.23
TNC-204ENST00000460345 XRN1Q8IZH2 1706 aaKnown RBP13.64□□□□□ -0.23
TNC-204ENST00000460345 DDX10Q13206 875 aaKnown RBP13.63□□□□□ -0.23
TNC-204ENST00000460345 RBM33Q96EV2 1170 aaKnown RBP13.62□□□□□ -0.23
TNC-204ENST00000460345 SRPK2P78362 688 aaKnown RBP13.61□□□□□ -0.23
TNC-204ENST00000460345 C14orf37Q86TY3 774 aa13.61□□□□□ -0.23
TNC-204ENST00000460345 CDK19Q9BWU1 502 aa13.61□□□□□ -0.23
TNC-204ENST00000460345 NWD1Q149M9 1564 aa13.6□□□□□ -0.23
TNC-204ENST00000460345 CABP2Q9NPB3 220 aa13.6□□□□□ -0.23
TNC-204ENST00000460345 ZNF335Q9H4Z2 1342 aaPredicted RBP13.6□□□□□ -0.23
TNC-204ENST00000460345 WASLO00401 505 aaPredicted RBP13.59□□□□□ -0.23
TNC-204ENST00000460345 NKTRP30414 1462 aaKnown RBP13.58□□□□□ -0.24
TNC-204ENST00000460345 TULP4Q9NRJ4 1543 aa13.58□□□□□ -0.24
TNC-204ENST00000460345 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.57□□□□□ -0.24
TNC-204ENST00000460345 TMC1Q8TDI8 760 aa13.57□□□□□ -0.24
TNC-204ENST00000460345 PUS7Q96PZ0 661 aaKnown RBP13.57□□□□□ -0.24
TNC-204ENST00000460345 DIEXFQ68CQ4 756 aaKnown RBP13.56□□□□□ -0.24
TNC-204ENST00000460345 TMEM94Q12767 1356 aa13.56□□□□□ -0.24
TNC-204ENST00000460345 STRCP1A6NGW2 1772 aa13.55□□□□□ -0.24
TNC-204ENST00000460345 NUTM2FA1L443 756 aa13.55□□□□□ -0.24
TNC-204ENST00000460345 ATAD2Q6PL18 1390 aa13.55□□□□□ -0.24
TNC-204ENST00000460345 NUDT16Q96DE0 195 aaKnown RBP13.54□□□□□ -0.24
TNC-204ENST00000460345 ADGRL3Q9HAR2 1447 aa13.54□□□□□ -0.24
TNC-204ENST00000460345 SLC12A5Q9H2X9 1139 aa13.53□□□□□ -0.24
TNC-204ENST00000460345 C19orf44Q9H6X5 657 aa13.53□□□□□ -0.24
TNC-204ENST00000460345 PANK3Q9H999 370 aa13.53□□□□□ -0.24
TNC-204ENST00000460345 ADGRB2O60241 1585 aa13.53□□□□□ -0.24
TNC-204ENST00000460345 NCOA3Q9Y6Q9 1424 aa13.52□□□□□ -0.25
TNC-204ENST00000460345 LRRC7Q96NW7 1537 aa13.51□□□□□ -0.25
TNC-204ENST00000460345 ATF3P18847 181 aa13.51□□□□□ -0.25
TNC-204ENST00000460345 CABP1Q9NZU7 370 aa13.51□□□□□ -0.25
TNC-204ENST00000460345 CCDC61Q9Y6R9 512 aa13.51□□□□□ -0.25
TNC-204ENST00000460345 NALCNQ8IZF0 1738 aa13.5□□□□□ -0.25
TNC-204ENST00000460345 MSH6P52701 1360 aa13.5□□□□□ -0.25
TNC-204ENST00000460345 PRR36Q9H6K5 1346 aa13.5□□□□□ -0.25
TNC-204ENST00000460345 NINLQ9Y2I6 1382 aa13.49□□□□□ -0.25
TNC-204ENST00000460345 PPIP5K1Q6PFW1 1433 aa13.48□□□□□ -0.25
TNC-204ENST00000460345 HDGFL2Q7Z4V5 671 aaPredicted RBP13.48□□□□□ -0.25
TNC-204ENST00000460345 CADPS2Q86UW7 1296 aa13.48□□□□□ -0.25
TNC-204ENST00000460345 TERF2IPQ9NYB0 399 aa13.48□□□□□ -0.25
TNC-204ENST00000460345 CDC42BPGQ6DT37 1551 aa13.48□□□□□ -0.25
TNC-204ENST00000460345 KNSTRNQ9Y448 316 aa13.47□□□□□ -0.25
TNC-204ENST00000460345 ATP7BP35670 1465 aa13.47□□□□□ -0.25
TNC-204ENST00000460345 ANKARQ7Z5J8 1434 aa13.47□□□□□ -0.25
TNC-204ENST00000460345 MYOM1P52179 1685 aa13.47□□□□□ -0.25
TNC-204ENST00000460345 CNGB1Q14028 1251 aaPredicted RBP13.46□□□□□ -0.25
TNC-204ENST00000460345 ESCO1Q5FWF5 840 aa13.46□□□□□ -0.25
TNC-204ENST00000460345 PMFBP1Q8TBY8 1022 aa13.46□□□□□ -0.25
TNC-204ENST00000460345 FMN2Q9NZ56 1722 aa13.46□□□□□ -0.25
TNC-204ENST00000460345 ANKRD36BQ8N2N9 1353 aa13.45□□□□□ -0.26
TNC-204ENST00000460345 PLEKHG3A1L390 1219 aa13.45□□□□□ -0.26
TNC-204ENST00000460345 NGDNQ8NEJ9 315 aaKnown RBP13.45□□□□□ -0.26
TNC-204ENST00000460345 DCCP43146 1447 aa13.45□□□□□ -0.26
TNC-204ENST00000460345 XIRP1Q702N8 1843 aaKnown RBP13.44□□□□□ -0.26
TNC-204ENST00000460345 LTBP4Q8N2S1 1624 aa13.44□□□□□ -0.26
TNC-204ENST00000460345 PER1O15534 1290 aaPredicted RBP13.44□□□□□ -0.26
TNC-204ENST00000460345 ANP32CO43423 234 aa13.44□□□□□ -0.26
TNC-204ENST00000460345 CARD14Q9BXL6 1004 aa13.44□□□□□ -0.26
TNC-204ENST00000460345 PHF8Q9UPP1 1060 aa13.44□□□□□ -0.26
TNC-204ENST00000460345 A0A1W2PP64 1363 aa13.44□□□□□ -0.26
TNC-204ENST00000460345 ACEP12821 1306 aa13.43□□□□□ -0.26
TNC-204ENST00000460345 USP32Q8NFA0 1604 aa13.43□□□□□ -0.26
TNC-204ENST00000460345 ZNF692Q9BU19 519 aaPredicted RBP13.43□□□□□ -0.26
TNC-204ENST00000460345 RGPD8O14715 1765 aaPredicted RBP13.43□□□□□ -0.26
TNC-204ENST00000460345 C1orf167Q5SNV9 1468 aa13.42□□□□□ -0.26
TNC-204ENST00000460345 NSD3Q9BZ95 1437 aa13.42□□□□□ -0.26
TNC-204ENST00000460345 ORAI2Q96SN7 254 aa13.42□□□□□ -0.26
TNC-204ENST00000460345 KTN1Q86UP2 1357 aaKnown RBP13.42□□□□□ -0.26
TNC-204ENST00000460345 MST1RQ04912 1400 aa13.41□□□□□ -0.26
TNC-204ENST00000460345 CC2D1BQ5T0F9 858 aaKnown RBP13.41□□□□□ -0.26
TNC-204ENST00000460345 ITSN1Q15811 1721 aa13.41□□□□□ -0.26
TNC-204ENST00000460345 CD163L1Q9NR16 1453 aa13.41□□□□□ -0.26
TNC-204ENST00000460345 TOPAZ1Q8N9V7 1692 aa13.4□□□□□ -0.26
TNC-204ENST00000460345 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.4□□□□□ -0.26
TNC-204ENST00000460345 SLAIN2Q9P270 581 aa13.4□□□□□ -0.26
TNC-204ENST00000460345 CPSF1Q10570 1443 aaKnown RBP13.39□□□□□ -0.27
TNC-204ENST00000460345 PSME1Q06323 249 aa13.39□□□□□ -0.27
TNC-204ENST00000460345 MIER1Q8N108 512 aa13.39□□□□□ -0.27
TNC-204ENST00000460345 CGNL1Q0VF96 1302 aa13.39□□□□□ -0.27
TNC-204ENST00000460345 POLR3AO14802 1390 aaPredicted RBP13.38□□□□□ -0.27
TNC-204ENST00000460345 AMER1Q5JTC6 1135 aaPredicted RBP13.38□□□□□ -0.27
TNC-204ENST00000460345 FOXO3O43524 673 aa13.37□□□□□ -0.27
TNC-204ENST00000460345 PRKRIP1Q9H875 184 aaPredicted RBP13.37□□□□□ -0.27
TNC-204ENST00000460345 EDC4Q6P2E9 1401 aaKnown RBP13.37□□□□□ -0.27
TNC-204ENST00000460345 TTC21BQ7Z4L5 1316 aa13.37□□□□□ -0.27
TNC-204ENST00000460345 PAK3O75914 559 aaPredicted RBP13.36□□□□□ -0.27
TNC-204ENST00000460345 USP6P35125 1406 aa13.36□□□□□ -0.27
TNC-204ENST00000460345 AKAP12Q02952 1782 aa13.35□□□□□ -0.27
TNC-204ENST00000460345 XPCQ01831 940 aaPredicted RBP13.35□□□□□ -0.27
TNC-204ENST00000460345 RALBP1Q15311 655 aa13.35□□□□□ -0.27
TNC-204ENST00000460345 BRINP3Q76B58 766 aa13.35□□□□□ -0.27
TNC-204ENST00000460345 NPC1L1Q9UHC9 1359 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms