RNA–Protein interactions for RNA: ENST00000460328.5

TTC3-211, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-211ENST00000460328 ZNF697Q5TEC3 545 aa8.98□□□□□ -0.97
TTC3-211ENST00000460328 TRIM67Q6ZTA4 783 aa8.98□□□□□ -0.97
TTC3-211ENST00000460328 ZNF598Q86UK7 904 aaKnown RBP8.98□□□□□ -0.97
TTC3-211ENST00000460328 PARP9Q8IXQ6 854 aa8.98□□□□□ -0.97
TTC3-211ENST00000460328 ZNF787Q6DD87 383 aa8.97□□□□□ -0.97
TTC3-211ENST00000460328 USB1Q9BQ65 265 aaKnown RBP8.97□□□□□ -0.97
TTC3-211ENST00000460328 SLC24A3Q9HC58 644 aa8.96□□□□□ -0.98
TTC3-211ENST00000460328 SPIRE2Q8WWL2 714 aa8.95□□□□□ -0.98
TTC3-211ENST00000460328 SYMPKQ92797 1274 aaKnown RBP8.95□□□□□ -0.98
TTC3-211ENST00000460328 FDX1P10109 184 aa8.94□□□□□ -0.98
TTC3-211ENST00000460328 MMP16P51512 607 aa8.94□□□□□ -0.98
TTC3-211ENST00000460328 BCANQ96GW7 911 aa8.94□□□□□ -0.98
TTC3-211ENST00000460328 BEGAINQ9BUH8 593 aa8.94□□□□□ -0.98
TTC3-211ENST00000460328 MOXD2PA6NHM9 499 aa8.92□□□□□ -0.98
TTC3-211ENST00000460328 TNFRSF10AO00220 468 aa8.92□□□□□ -0.98
TTC3-211ENST00000460328 DXOO77932 396 aaKnown RBP8.92□□□□□ -0.98
TTC3-211ENST00000460328 MS4A1P11836 297 aa8.92□□□□□ -0.98
TTC3-211ENST00000460328 NDUFV2P19404 249 aa8.92□□□□□ -0.98
TTC3-211ENST00000460328 RPIAP49247 311 aa8.92□□□□□ -0.98
TTC3-211ENST00000460328 PRR20EP86478 221 aa8.92□□□□□ -0.98
TTC3-211ENST00000460328 PRR20CP86479 221 aa8.92□□□□□ -0.98
TTC3-211ENST00000460328 PRR20DP86480 221 aa8.92□□□□□ -0.98
TTC3-211ENST00000460328 PRR20BP86481 221 aa8.92□□□□□ -0.98
TTC3-211ENST00000460328 PRR20AP86496 221 aa8.92□□□□□ -0.98
TTC3-211ENST00000460328 PDE4DQ08499 809 aa8.92□□□□□ -0.98
TTC3-211ENST00000460328 PCDHGC3Q9UN70 934 aa8.92□□□□□ -0.98
TTC3-211ENST00000460328 GDF9O60383 454 aa8.91□□□□□ -0.98
TTC3-211ENST00000460328 C6orf229H3BNL8 230 aa8.9□□□□□ -0.98
TTC3-211ENST00000460328 ZBTB24O43167 697 aaPredicted RBP8.9□□□□□ -0.98
TTC3-211ENST00000460328 FOXC1Q12948 553 aa8.9□□□□□ -0.98
TTC3-211ENST00000460328 RETREG3Q86VR2 466 aa8.9□□□□□ -0.98
TTC3-211ENST00000460328 DGAT1O75907 488 aa8.89□□□□□ -0.99
TTC3-211ENST00000460328 PKDCCQ504Y2 493 aa8.89□□□□□ -0.99
TTC3-211ENST00000460328 TBC1D2Q9BYX2 928 aa8.89□□□□□ -0.99
TTC3-211ENST00000460328 CD2BP2O95400 341 aaKnown RBP8.88□□□□□ -0.99
TTC3-211ENST00000460328 JUNDP17535 347 aa8.88□□□□□ -0.99
TTC3-211ENST00000460328 CCDC24Q8N4L8 307 aa8.88□□□□□ -0.99
TTC3-211ENST00000460328 ZNF775Q96BV0 537 aaPredicted RBP8.88□□□□□ -0.99
TTC3-211ENST00000460328 PKD2L1Q9P0L9 805 aa8.88□□□□□ -0.99
TTC3-211ENST00000460328 MYT1Q01538 1121 aa8.87□□□□□ -0.99
TTC3-211ENST00000460328 TRIM32Q13049 653 aa8.85□□□□□ -0.99
TTC3-211ENST00000460328 DIXDC1Q155Q3 683 aa8.85□□□□□ -0.99
TTC3-211ENST00000460328 RSBN1LQ6PCB5 846 aaPredicted RBP8.85□□□□□ -0.99
TTC3-211ENST00000460328 FAM187AA6NFU0 413 aa8.84□□□□□ -0.99
TTC3-211ENST00000460328 MTMR2Q13614 643 aa8.84□□□□□ -0.99
TTC3-211ENST00000460328 NUDT12Q9BQG2 462 aa8.84□□□□□ -0.99
TTC3-211ENST00000460328 PRR7Q8TB68 274 aa8.83□□□□□ -1
TTC3-211ENST00000460328 SPTLC1O15269 473 aa8.82□□□□□ -1
TTC3-211ENST00000460328 GJA5P36382 358 aa8.82□□□□□ -1
TTC3-211ENST00000460328 PCDHB15Q9Y5E8 787 aa8.82□□□□□ -1
TTC3-211ENST00000460328 RIC3Q7Z5B4 369 aa8.81□□□□□ -1
TTC3-211ENST00000460328 SPDYE5A6NIY4 337 aa8.8□□□□□ -1
TTC3-211ENST00000460328 CSPP1Q1MSJ5 1256 aa8.8□□□□□ -1
TTC3-211ENST00000460328 CYP4X1Q8N118 509 aa8.8□□□□□ -1
TTC3-211ENST00000460328 WNT7AO00755 349 aa8.79□□□□□ -1
TTC3-211ENST00000460328 CCNYL3P0C7X3 344 aa8.79□□□□□ -1
TTC3-211ENST00000460328 PTPRNQ16849 979 aa8.79□□□□□ -1
TTC3-211ENST00000460328 MYSM1Q5VVJ2 828 aa8.79□□□□□ -1
TTC3-211ENST00000460328 PTCRAQ6ISU1 281 aaPredicted RBP8.79□□□□□ -1
TTC3-211ENST00000460328 TOR4AQ9NXH8 423 aa8.79□□□□□ -1
TTC3-211ENST00000460328 LIMD1Q9UGP4 676 aa8.79□□□□□ -1
TTC3-211ENST00000460328 HRCP23327 699 aa8.78□□□□□ -1
TTC3-211ENST00000460328 SKOR1P84550 965 aa8.78□□□□□ -1
TTC3-211ENST00000460328 CABLES1Q8TDN4 633 aa8.78□□□□□ -1
TTC3-211ENST00000460328 ZBTB3Q9H5J0 574 aa8.78□□□□□ -1
TTC3-211ENST00000460328 POTECB2RU33 542 aa8.77□□□□□ -1.01
TTC3-211ENST00000460328 CFAP99D6REC4 459 aa8.77□□□□□ -1.01
TTC3-211ENST00000460328 MRGPRX2Q96LB1 330 aa8.77□□□□□ -1.01
TTC3-211ENST00000460328 TTC24A2A3L6 582 aaPredicted RBP8.76□□□□□ -1.01
TTC3-211ENST00000460328 WNT7BP56706 349 aa8.76□□□□□ -1.01
TTC3-211ENST00000460328 PRPF38BQ5VTL8 546 aaKnown RBP8.76□□□□□ -1.01
TTC3-211ENST00000460328 DESI1Q6ICB0 168 aa8.76□□□□□ -1.01
TTC3-211ENST00000460328 GPBP1L1Q9HC44 474 aaPredicted RBP8.76□□□□□ -1.01
TTC3-211ENST00000460328 RC3H1Q5TC82 1133 aaKnown RBP8.75□□□□□ -1.01
TTC3-211ENST00000460328 EVA1BQ9NVM1 165 aa8.75□□□□□ -1.01
TTC3-211ENST00000460328 ST8SIA5O15466 376 aa8.74□□□□□ -1.01
TTC3-211ENST00000460328 KCNH2Q12809 1159 aa8.74□□□□□ -1.01
TTC3-211ENST00000460328 QPCTQ16769 361 aa8.74□□□□□ -1.01
TTC3-211ENST00000460328 UNC93B1Q9H1C4 597 aa8.74□□□□□ -1.01
TTC3-211ENST00000460328 AAASQ9NRG9 546 aa8.74□□□□□ -1.01
TTC3-211ENST00000460328 CLK2P49760 499 aaKnown RBP8.73□□□□□ -1.01
TTC3-211ENST00000460328 CRIPAKQ8N1N5 446 aa8.73□□□□□ -1.01
TTC3-211ENST00000460328 SNIP1Q8TAD8 396 aaKnown RBP8.73□□□□□ -1.01
TTC3-211ENST00000460328 KDM4CQ9H3R0 1056 aa8.73□□□□□ -1.01
TTC3-211ENST00000460328 NUTM2BA6NNL0 878 aaPredicted RBP8.72□□□□□ -1.01
TTC3-211ENST00000460328 NUTM2EB1AL46 878 aaPredicted RBP8.72□□□□□ -1.01
TTC3-211ENST00000460328 TUSC1Q2TAM9 212 aa8.72□□□□□ -1.01
TTC3-211ENST00000460328 LINC01559Q495D7 138 aa8.72□□□□□ -1.01
TTC3-211ENST00000460328 NUTM2DQ5VT03 806 aaPredicted RBP8.72□□□□□ -1.01
TTC3-211ENST00000460328 LYPD8Q6UX82 237 aa8.72□□□□□ -1.01
TTC3-211ENST00000460328 NUTM2AQ8IVF1 878 aaPredicted RBP8.72□□□□□ -1.01
TTC3-211ENST00000460328 TSC1Q92574 1164 aa8.72□□□□□ -1.01
TTC3-211ENST00000460328 RSPH6AQ9H0K4 717 aa8.72□□□□□ -1.01
TTC3-211ENST00000460328 POLR3EQ9NVU0 708 aa8.72□□□□□ -1.01
TTC3-211ENST00000460328 J3QL48 77 aa8.71□□□□□ -1.02
TTC3-211ENST00000460328 LILRB3O75022 631 aa8.71□□□□□ -1.02
TTC3-211ENST00000460328 AVPP01185 164 aa8.71□□□□□ -1.02
TTC3-211ENST00000460328 SMPD1P17405 629 aa8.71□□□□□ -1.02
TTC3-211ENST00000460328 CTHP32929 405 aa8.71□□□□□ -1.02
TTC3-211ENST00000460328 SH3BP2P78314 561 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms