RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 NRXN3Q9Y4C0 1643 aa14.04□□□□□ -0.16
HERC4-207ENST00000460168 SAFB2Q14151 953 aaKnown RBP eCLIP14.04□□□□□ -0.16
HERC4-207ENST00000460168 THEMISQ8N1K5 641 aaPredicted RBP14.04□□□□□ -0.16
HERC4-207ENST00000460168 PTPRMP28827 1452 aa14.04□□□□□ -0.16
HERC4-207ENST00000460168 SETD1AO15047 1707 aaKnown RBP14.04□□□□□ -0.16
HERC4-207ENST00000460168 TXNDC2Q86VQ3 553 aa14.03□□□□□ -0.16
HERC4-207ENST00000460168 POGKQ9P215 609 aa14.03□□□□□ -0.16
HERC4-207ENST00000460168 LTKP29376 864 aa14.02□□□□□ -0.16
HERC4-207ENST00000460168 CEP170BQ9Y4F5 1589 aaPredicted RBP14.02□□□□□ -0.17
HERC4-207ENST00000460168 SLIT1O75093 1534 aa14.02□□□□□ -0.17
HERC4-207ENST00000460168 PRAM1Q96QH2 718 aa14.02□□□□□ -0.17
HERC4-207ENST00000460168 MYOM1P52179 1685 aa14.01□□□□□ -0.17
HERC4-207ENST00000460168 PLEKHG1Q9ULL1 1385 aa14.01□□□□□ -0.17
HERC4-207ENST00000460168 EVC2Q86UK5 1308 aa14.01□□□□□ -0.17
HERC4-207ENST00000460168 PER1O15534 1290 aaPredicted RBP14□□□□□ -0.17
HERC4-207ENST00000460168 ARHGAP23Q9P227 1491 aa14□□□□□ -0.17
HERC4-207ENST00000460168 METP08581 1390 aa14□□□□□ -0.17
HERC4-207ENST00000460168 LRPPRCP42704 1394 aaKnown RBP14□□□□□ -0.17
HERC4-207ENST00000460168 KTN1Q86UP2 1357 aaKnown RBP13.99□□□□□ -0.17
HERC4-207ENST00000460168 AAMPQ13685 434 aa13.99□□□□□ -0.17
HERC4-207ENST00000460168 KNSTRNQ9Y448 316 aa13.99□□□□□ -0.17
HERC4-207ENST00000460168 MRS2Q9HD23 443 aa13.98□□□□□ -0.17
HERC4-207ENST00000460168 ABCC11Q96J66 1382 aa13.98□□□□□ -0.17
HERC4-207ENST00000460168 DLC1Q96QB1 1528 aa13.98□□□□□ -0.17
HERC4-207ENST00000460168 TULP4Q9NRJ4 1543 aa13.98□□□□□ -0.17
HERC4-207ENST00000460168 MINK1Q8N4C8 1332 aaPredicted RBP13.98□□□□□ -0.17
HERC4-207ENST00000460168 RALBP1Q15311 655 aa13.98□□□□□ -0.17
HERC4-207ENST00000460168 SETD1BQ9UPS6 1966 aaKnown RBP13.97□□□□□ -0.17
HERC4-207ENST00000460168 ADAMTS13Q76LX8 1427 aa13.97□□□□□ -0.17
HERC4-207ENST00000460168 CC2D1BQ5T0F9 858 aaKnown RBP13.97□□□□□ -0.17
HERC4-207ENST00000460168 TMC1Q8TDI8 760 aa13.97□□□□□ -0.17
HERC4-207ENST00000460168 CCDC184Q52MB2 194 aa13.96□□□□□ -0.17
HERC4-207ENST00000460168 ZNF142P52746 1687 aaPredicted RBP13.96□□□□□ -0.17
HERC4-207ENST00000460168 SRPK2P78362 688 aaKnown RBP13.96□□□□□ -0.17
HERC4-207ENST00000460168 SLC26A8Q96RN1 970 aa13.96□□□□□ -0.17
HERC4-207ENST00000460168 WAPLQ7Z5K2 1190 aa13.95□□□□□ -0.18
HERC4-207ENST00000460168 PUS7Q96PZ0 661 aaKnown RBP13.95□□□□□ -0.18
HERC4-207ENST00000460168 CABP2Q9NPB3 220 aa13.95□□□□□ -0.18
HERC4-207ENST00000460168 MYBBP1AQ9BQG0 1328 aaKnown RBP13.94□□□□□ -0.18
HERC4-207ENST00000460168 KNDC1Q76NI1 1749 aa13.94□□□□□ -0.18
HERC4-207ENST00000460168 PARD3Q8TEW0 1356 aa13.94□□□□□ -0.18
HERC4-207ENST00000460168 PLEKHH1Q9ULM0 1364 aa13.93□□□□□ -0.18
HERC4-207ENST00000460168 TECPR2O15040 1411 aa13.93□□□□□ -0.18
HERC4-207ENST00000460168 DEKP35659 375 aaKnown RBP13.93□□□□□ -0.18
HERC4-207ENST00000460168 SLC12A5Q9H2X9 1139 aa13.93□□□□□ -0.18
HERC4-207ENST00000460168 GLIPR1L2Q4G1C9 344 aa13.92□□□□□ -0.18
HERC4-207ENST00000460168 CPS1P31327 1500 aa13.92□□□□□ -0.18
HERC4-207ENST00000460168 ANKLE2Q86XL3 938 aa13.92□□□□□ -0.18
HERC4-207ENST00000460168 MED14O60244 1454 aa13.92□□□□□ -0.18
HERC4-207ENST00000460168 FAM135BQ49AJ0 1406 aa13.92□□□□□ -0.18
HERC4-207ENST00000460168 FAM9BQ8IZU0 186 aa13.91□□□□□ -0.18
HERC4-207ENST00000460168 TBX22Q9Y458 520 aa13.91□□□□□ -0.18
HERC4-207ENST00000460168 ATAD2Q6PL18 1390 aa13.91□□□□□ -0.18
HERC4-207ENST00000460168 DIP2AQ14689 1571 aa13.91□□□□□ -0.18
HERC4-207ENST00000460168 SIRT1Q96EB6 747 aa13.9□□□□□ -0.18
HERC4-207ENST00000460168 CDK19Q9BWU1 502 aa13.9□□□□□ -0.18
HERC4-207ENST00000460168 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.9□□□□□ -0.18
HERC4-207ENST00000460168 NLRP13Q86W25 1043 aa13.9□□□□□ -0.18
HERC4-207ENST00000460168 NINLQ9Y2I6 1382 aa13.9□□□□□ -0.19
HERC4-207ENST00000460168 CARD14Q9BXL6 1004 aa13.89□□□□□ -0.19
HERC4-207ENST00000460168 BRD4O60885 1362 aaPredicted RBP13.89□□□□□ -0.19
HERC4-207ENST00000460168 ROBO2Q9HCK4 1378 aa13.89□□□□□ -0.19
HERC4-207ENST00000460168 ZMYND15Q9H091 742 aa13.88□□□□□ -0.19
HERC4-207ENST00000460168 NSD3Q9BZ95 1437 aa13.88□□□□□ -0.19
HERC4-207ENST00000460168 ANKRD36BQ8N2N9 1353 aa13.88□□□□□ -0.19
HERC4-207ENST00000460168 NPC1L1Q9UHC9 1359 aa13.88□□□□□ -0.19
HERC4-207ENST00000460168 AMOTL2Q9Y2J4 779 aa13.88□□□□□ -0.19
HERC4-207ENST00000460168 PTPRUQ92729 1446 aa13.87□□□□□ -0.19
HERC4-207ENST00000460168 RSPH6AQ9H0K4 717 aa13.87□□□□□ -0.19
HERC4-207ENST00000460168 HNRNPUQ00839 825 aaKnown RBP eCLIP13.87□□□□□ -0.19
HERC4-207ENST00000460168 NPM2Q86SE8 214 aaKnown RBP13.87□□□□□ -0.19
HERC4-207ENST00000460168 WASLO00401 505 aaPredicted RBP13.86□□□□□ -0.19
HERC4-207ENST00000460168 A0A0U1RQG5 324 aaPredicted RBP13.85□□□□□ -0.19
HERC4-207ENST00000460168 RBM10P98175 930 aaKnown RBP13.85□□□□□ -0.19
HERC4-207ENST00000460168 TERF2IPQ9NYB0 399 aa13.85□□□□□ -0.19
HERC4-207ENST00000460168 A0A1W2PP64 1363 aa13.84□□□□□ -0.19
HERC4-207ENST00000460168 CGNL1Q0VF96 1302 aa13.84□□□□□ -0.19
HERC4-207ENST00000460168 BRD2P25440 801 aaKnown RBP13.84□□□□□ -0.19
HERC4-207ENST00000460168 PTCH1Q13635 1447 aa13.84□□□□□ -0.19
HERC4-207ENST00000460168 PIK3R4Q99570 1358 aa13.84□□□□□ -0.19
HERC4-207ENST00000460168 PNISRQ8TF01 805 aaKnown RBP13.83□□□□□ -0.2
HERC4-207ENST00000460168 CABP1Q9NZU7 370 aa13.83□□□□□ -0.2
HERC4-207ENST00000460168 HDGFL2Q7Z4V5 671 aaPredicted RBP13.83□□□□□ -0.2
HERC4-207ENST00000460168 USP32Q8NFA0 1604 aa13.83□□□□□ -0.2
HERC4-207ENST00000460168 PPP2R1AP30153 589 aa13.82□□□□□ -0.2
HERC4-207ENST00000460168 XRN1Q8IZH2 1706 aaKnown RBP13.82□□□□□ -0.2
HERC4-207ENST00000460168 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.82□□□□□ -0.2
HERC4-207ENST00000460168 CHMP4AQ9BY43 222 aa13.82□□□□□ -0.2
HERC4-207ENST00000460168 ADGRB2O60241 1585 aa13.81□□□□□ -0.2
HERC4-207ENST00000460168 NPHP4O75161 1426 aaPredicted RBP13.81□□□□□ -0.2
HERC4-207ENST00000460168 KCNA6P17658 529 aa13.81□□□□□ -0.2
HERC4-207ENST00000460168 NUDT16Q96DE0 195 aaKnown RBP13.8□□□□□ -0.2
HERC4-207ENST00000460168 PPIP5K1Q6PFW1 1433 aa13.8□□□□□ -0.2
HERC4-207ENST00000460168 CD163L1Q9NR16 1453 aa13.8□□□□□ -0.2
HERC4-207ENST00000460168 MORC1Q86VD1 984 aa13.8□□□□□ -0.2
HERC4-207ENST00000460168 ATP7BP35670 1465 aa13.8□□□□□ -0.2
HERC4-207ENST00000460168 CCDC61Q9Y6R9 512 aa13.79□□□□□ -0.2
HERC4-207ENST00000460168 NCKAP5LQ9HCH0 1330 aa13.79□□□□□ -0.2
HERC4-207ENST00000460168 NSD2O96028 1365 aa13.79□□□□□ -0.2
HERC4-207ENST00000460168 SUPT16HQ9Y5B9 1047 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms