RNA–Protein interactions for RNA: ENST00000460119.1

PDE6B-203, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-203ENST00000460119 XPCQ01831 940 aaPredicted RBP32.54■■■□□ 2.8
PDE6B-203ENST00000460119 RGS12O14924 1447 aa32.52■■■□□ 2.8
PDE6B-203ENST00000460119 TMEM132EQ6IEE7 984 aa32.52■■■□□ 2.8
PDE6B-203ENST00000460119 USP21Q9UK80 565 aa32.52■■■□□ 2.8
PDE6B-203ENST00000460119 FOXO3O43524 673 aa32.5■■■□□ 2.79
PDE6B-203ENST00000460119 MPHOSPH9Q99550 1183 aa32.5■■■□□ 2.79
PDE6B-203ENST00000460119 PRAG1Q86YV5 1406 aa32.47■■■□□ 2.79
PDE6B-203ENST00000460119 FNBP4Q8N3X1 1017 aaPredicted RBP32.45■■■□□ 2.79
PDE6B-203ENST00000460119 PLEKHH1Q9ULM0 1364 aa32.44■■■□□ 2.78
PDE6B-203ENST00000460119 CCDC144AA2RUR9 1427 aa32.43■■■□□ 2.78
PDE6B-203ENST00000460119 TRPC5Q9UL62 973 aaPredicted RBP32.43■■■□□ 2.78
PDE6B-203ENST00000460119 NPHP3Q7Z494 1330 aa32.42■■■□□ 2.78
PDE6B-203ENST00000460119 SPATA31E1Q6ZUB1 1445 aa32.41■■■□□ 2.78
PDE6B-203ENST00000460119 LRPPRCP42704 1394 aaKnown RBP32.4■■■□□ 2.78
PDE6B-203ENST00000460119 LAMC1P11047 1609 aa32.39■■■□□ 2.78
PDE6B-203ENST00000460119 PPLO60437 1756 aa32.39■■■□□ 2.78
PDE6B-203ENST00000460119 ABCC11Q96J66 1382 aa32.36■■■□□ 2.77
PDE6B-203ENST00000460119 ANKRD30BQ9BXX2 1392 aa32.36■■■□□ 2.77
PDE6B-203ENST00000460119 PXDNQ92626 1479 aa32.33■■■□□ 2.77
PDE6B-203ENST00000460119 MYOM2P54296 1465 aa32.32■■■□□ 2.76
PDE6B-203ENST00000460119 ATRNO75882 1429 aa32.32■■■□□ 2.76
PDE6B-203ENST00000460119 TECPR2O15040 1411 aa32.31■■■□□ 2.76
PDE6B-203ENST00000460119 CDC42BPGQ6DT37 1551 aa32.29■■■□□ 2.76
PDE6B-203ENST00000460119 CFAP70Q5T0N1 1121 aa32.29■■■□□ 2.76
PDE6B-203ENST00000460119 BCL9LQ86UU0 1499 aa32.29■■■□□ 2.76
PDE6B-203ENST00000460119 PLEKHG5O94827 1062 aa32.28■■■□□ 2.76
PDE6B-203ENST00000460119 KRT28Q7Z3Y7 464 aa32.28■■■□□ 2.76
PDE6B-203ENST00000460119 C14orf93Q9H972 538 aaKnown RBP32.28■■■□□ 2.76
PDE6B-203ENST00000460119 ATAD2Q6PL18 1390 aa32.28■■■□□ 2.76
PDE6B-203ENST00000460119 YTHDC2Q9H6S0 1430 aaKnown RBP32.26■■■□□ 2.76
PDE6B-203ENST00000460119 PIK3C2GO75747 1445 aa32.26■■■□□ 2.75
PDE6B-203ENST00000460119 SPATA31A3Q5VYP0 1347 aa32.26■■■□□ 2.75
PDE6B-203ENST00000460119 SAFB2Q14151 953 aaKnown RBP eCLIP32.25■■■□□ 2.75
PDE6B-203ENST00000460119 GJD4Q96KN9 370 aaPredicted RBP32.25■■■□□ 2.75
PDE6B-203ENST00000460119 SIRT1Q96EB6 747 aa32.23■■■□□ 2.75
PDE6B-203ENST00000460119 COL22A1Q8NFW1 1626 aaPredicted RBP32.22■■■□□ 2.75
PDE6B-203ENST00000460119 CABLES1Q8TDN4 633 aa32.21■■■□□ 2.75
PDE6B-203ENST00000460119 PHF8Q9UPP1 1060 aa32.2■■■□□ 2.75
PDE6B-203ENST00000460119 UNC5CLQ8IV45 518 aa32.18■■■□□ 2.74
PDE6B-203ENST00000460119 PRAM1Q96QH2 718 aa32.18■■■□□ 2.74
PDE6B-203ENST00000460119 DHX57Q6P158 1386 aaKnown RBP32.16■■■□□ 2.74
PDE6B-203ENST00000460119 LMOD2Q6P5Q4 547 aa32.14■■■□□ 2.74
PDE6B-203ENST00000460119 HAP1P54257 671 aaPredicted RBP32.12■■■□□ 2.73
PDE6B-203ENST00000460119 PSME1Q06323 249 aa32.12■■■□□ 2.73
PDE6B-203ENST00000460119 PMFBP1Q8TBY8 1022 aa32.12■■■□□ 2.73
PDE6B-203ENST00000460119 POGKQ9P215 609 aa32.11■■■□□ 2.73
PDE6B-203ENST00000460119 IFT172Q9UG01 1749 aa32.11■■■□□ 2.73
PDE6B-203ENST00000460119 SLIT2O94813 1529 aa32.08■■■□□ 2.73
PDE6B-203ENST00000460119 FMN2Q9NZ56 1722 aa32.07■■■□□ 2.72
PDE6B-203ENST00000460119 ZRANB1Q9UGI0 708 aa32.07■■■□□ 2.72
PDE6B-203ENST00000460119 KDM2AQ9Y2K7 1162 aa32.07■■■□□ 2.72
PDE6B-203ENST00000460119 RALGAPBQ86X10 1494 aa32.07■■■□□ 2.72
PDE6B-203ENST00000460119 NRXN1Q9ULB1 1477 aa32.07■■■□□ 2.72
PDE6B-203ENST00000460119 CCDC125Q86Z20 511 aa32.06■■■□□ 2.72
PDE6B-203ENST00000460119 HIRIP3Q9BW71 556 aaPredicted RBP32.06■■■□□ 2.72
PDE6B-203ENST00000460119 TRAK1Q9UPV9 953 aa32.06■■■□□ 2.72
PDE6B-203ENST00000460119 KNDC1Q76NI1 1749 aa32.05■■■□□ 2.72
PDE6B-203ENST00000460119 SEPT12Q8IYM1 358 aa32.04■■■□□ 2.72
PDE6B-203ENST00000460119 TNS3Q68CZ2 1445 aa32.03■■■□□ 2.72
PDE6B-203ENST00000460119 CCDC9Q9Y3X0 531 aaKnown RBP32.03■■■□□ 2.72
PDE6B-203ENST00000460119 RAB3GAP2Q9H2M9 1393 aa32.03■■■□□ 2.72
PDE6B-203ENST00000460119 FAM83GA6ND36 823 aa32.02■■■□□ 2.72
PDE6B-203ENST00000460119 VPS72Q15906 364 aa32.01■■■□□ 2.71
PDE6B-203ENST00000460119 ACIN1Q9UKV3 1341 aaKnown RBP32■■■□□ 2.71
PDE6B-203ENST00000460119 SBNO1A3KN83 1393 aa32■■■□□ 2.71
PDE6B-203ENST00000460119 MINK1Q8N4C8 1332 aaPredicted RBP32■■■□□ 2.71
PDE6B-203ENST00000460119 GLI3P10071 1580 aa31.99■■■□□ 2.71
PDE6B-203ENST00000460119 DEFB132Q7Z7B7 95 aa31.98■■■□□ 2.71
PDE6B-203ENST00000460119 KIF1AQ12756 1690 aa31.97■■■□□ 2.71
PDE6B-203ENST00000460119 DCAF11Q8TEB1 546 aa31.97■■■□□ 2.71
PDE6B-203ENST00000460119 MARF1Q9Y4F3 1742 aaKnown RBP31.96■■■□□ 2.71
PDE6B-203ENST00000460119 PRR36Q9H6K5 1346 aa31.96■■■□□ 2.71
PDE6B-203ENST00000460119 ONECUT3O60422 494 aaPredicted RBP31.93■■■□□ 2.7
PDE6B-203ENST00000460119 RGPD8O14715 1765 aaPredicted RBP31.93■■■□□ 2.7
PDE6B-203ENST00000460119 ARHGEF10O15013 1369 aa31.93■■■□□ 2.7
PDE6B-203ENST00000460119 USP32Q8NFA0 1604 aa31.93■■■□□ 2.7
PDE6B-203ENST00000460119 BLMP54132 1417 aaPredicted RBP31.9■■■□□ 2.7
PDE6B-203ENST00000460119 WASLO00401 505 aaPredicted RBP31.89■■■□□ 2.7
PDE6B-203ENST00000460119 ANKARQ7Z5J8 1434 aa31.89■■■□□ 2.7
PDE6B-203ENST00000460119 DLC1Q96QB1 1528 aa31.89■■■□□ 2.7
PDE6B-203ENST00000460119 KRT27Q7Z3Y8 459 aa31.88■■■□□ 2.69
PDE6B-203ENST00000460119 BTG4Q9NY30 223 aa31.88■■■□□ 2.69
PDE6B-203ENST00000460119 ADGRB1O14514 1584 aa31.88■■■□□ 2.69
PDE6B-203ENST00000460119 A0A0G2JS52 829 aa31.87■■■□□ 2.69
PDE6B-203ENST00000460119 MYT1Q01538 1121 aa31.87■■■□□ 2.69
PDE6B-203ENST00000460119 FAM98CQ17RN3 349 aaKnown RBP31.86■■■□□ 2.69
PDE6B-203ENST00000460119 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.86■■■□□ 2.69
PDE6B-203ENST00000460119 GPRASP1Q5JY77 1395 aa31.85■■■□□ 2.69
PDE6B-203ENST00000460119 SF3B2Q13435 895 aaKnown RBP31.85■■■□□ 2.69
PDE6B-203ENST00000460119 NGDNQ8NEJ9 315 aaKnown RBP31.85■■■□□ 2.69
PDE6B-203ENST00000460119 PAK3O75914 559 aaPredicted RBP31.84■■■□□ 2.69
PDE6B-203ENST00000460119 FAM182BQ5T319 152 aa31.79■■■□□ 2.68
PDE6B-203ENST00000460119 NUDT16Q96DE0 195 aaKnown RBP31.77■■■□□ 2.68
PDE6B-203ENST00000460119 EP400Q96L91 3159 aa31.76■■■□□ 2.67
PDE6B-203ENST00000460119 BRWD3Q6RI45 1802 aa31.75■■■□□ 2.67
PDE6B-203ENST00000460119 ADGRB2O60241 1585 aa31.75■■■□□ 2.67
PDE6B-203ENST00000460119 SRCAPQ6ZRS2 3230 aa31.74■■■□□ 2.67
PDE6B-203ENST00000460119 EIF3AQ14152 1382 aaKnown RBP31.74■■■□□ 2.67
PDE6B-203ENST00000460119 NUTM2GQ5VZR2 741 aa31.74■■■□□ 2.67
PDE6B-203ENST00000460119 PLCH1Q4KWH8 1693 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms