RNA–Protein interactions for RNA: ENST00000460100.1

IMP4-207, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-207ENST00000460100 NBPF1Q3BBV0 1214 aa20.85■□□□□ 0.93
IMP4-207ENST00000460100 TRPM1Q7Z4N2 1603 aa20.83■□□□□ 0.93
IMP4-207ENST00000460100 PRAM1Q96QH2 718 aa20.83■□□□□ 0.93
IMP4-207ENST00000460100 TRAK1Q9UPV9 953 aa20.83■□□□□ 0.93
IMP4-207ENST00000460100 TONSLQ96HA7 1378 aa20.82■□□□□ 0.92
IMP4-207ENST00000460100 ARHGEF28Q8N1W1 1705 aaKnown RBP20.81■□□□□ 0.92
IMP4-207ENST00000460100 NBPF8Q3BBV2 869 aa20.81■□□□□ 0.92
IMP4-207ENST00000460100 C1orf167Q5SNV9 1468 aa20.81■□□□□ 0.92
IMP4-207ENST00000460100 BRINP3Q76B58 766 aa20.8■□□□□ 0.92
IMP4-207ENST00000460100 ADGRB2O60241 1585 aa20.78■□□□□ 0.92
IMP4-207ENST00000460100 POGKQ9P215 609 aa20.77■□□□□ 0.92
IMP4-207ENST00000460100 AHDC1Q5TGY3 1603 aaPredicted RBP20.77■□□□□ 0.92
IMP4-207ENST00000460100 FMN2Q9NZ56 1722 aa20.76■□□□□ 0.91
IMP4-207ENST00000460100 GPRASP1Q5JY77 1395 aa20.76■□□□□ 0.91
IMP4-207ENST00000460100 TIMELESSQ9UNS1 1208 aa20.75■□□□□ 0.91
IMP4-207ENST00000460100 SAFB2Q14151 953 aaKnown RBP eCLIP20.74■□□□□ 0.91
IMP4-207ENST00000460100 NHSL1Q5SYE7 1610 aa20.74■□□□□ 0.91
IMP4-207ENST00000460100 PHLPP1O60346 1717 aa20.73■□□□□ 0.91
IMP4-207ENST00000460100 COL16A1Q07092 1604 aaPredicted RBP20.73■□□□□ 0.91
IMP4-207ENST00000460100 ORAI2Q96SN7 254 aa20.72■□□□□ 0.91
IMP4-207ENST00000460100 RALGAPBQ86X10 1494 aa20.72■□□□□ 0.91
IMP4-207ENST00000460100 ROCK2O75116 1388 aaKnown RBP20.72■□□□□ 0.91
IMP4-207ENST00000460100 CCER1Q8TC90 406 aaPredicted RBP20.7■□□□□ 0.9
IMP4-207ENST00000460100 MINK1Q8N4C8 1332 aaPredicted RBP20.69■□□□□ 0.9
IMP4-207ENST00000460100 USP32Q8NFA0 1604 aa20.68■□□□□ 0.9
IMP4-207ENST00000460100 ANKARQ7Z5J8 1434 aa20.68■□□□□ 0.9
IMP4-207ENST00000460100 RGPD8O14715 1765 aaPredicted RBP20.67■□□□□ 0.9
IMP4-207ENST00000460100 WASLO00401 505 aaPredicted RBP20.67■□□□□ 0.9
IMP4-207ENST00000460100 HIRIP3Q9BW71 556 aaPredicted RBP20.67■□□□□ 0.9
IMP4-207ENST00000460100 NUTM2FA1L443 756 aa20.66■□□□□ 0.9
IMP4-207ENST00000460100 ESCO1Q5FWF5 840 aa20.66■□□□□ 0.9
IMP4-207ENST00000460100 CENPJQ9HC77 1338 aaPredicted RBP20.66■□□□□ 0.9
IMP4-207ENST00000460100 SOS2Q07890 1332 aaPredicted RBP20.65■□□□□ 0.9
IMP4-207ENST00000460100 DDX17Q92841 729 aaKnown RBP20.65■□□□□ 0.9
IMP4-207ENST00000460100 TULP4Q9NRJ4 1543 aa20.64■□□□□ 0.9
IMP4-207ENST00000460100 EIF3AQ14152 1382 aaKnown RBP20.63■□□□□ 0.89
IMP4-207ENST00000460100 JCADQ9P266 1359 aa20.63■□□□□ 0.89
IMP4-207ENST00000460100 PRR36Q9H6K5 1346 aa20.63■□□□□ 0.89
IMP4-207ENST00000460100 KIF1AQ12756 1690 aa20.63■□□□□ 0.89
IMP4-207ENST00000460100 QRICH2Q9H0J4 1663 aa20.63■□□□□ 0.89
IMP4-207ENST00000460100 CARD11Q9BXL7 1154 aa20.62■□□□□ 0.89
IMP4-207ENST00000460100 PXDNQ92626 1479 aa20.61■□□□□ 0.89
IMP4-207ENST00000460100 SHPRHQ149N8 1683 aa20.61■□□□□ 0.89
IMP4-207ENST00000460100 NPHP3Q7Z494 1330 aa20.6■□□□□ 0.89
IMP4-207ENST00000460100 CDK19Q9BWU1 502 aa20.6■□□□□ 0.89
IMP4-207ENST00000460100 ATP7BP35670 1465 aa20.6■□□□□ 0.89
IMP4-207ENST00000460100 FOXO3O43524 673 aa20.59■□□□□ 0.89
IMP4-207ENST00000460100 LRRC59Q96AG4 307 aaKnown RBP20.59■□□□□ 0.89
IMP4-207ENST00000460100 PHF8Q9UPP1 1060 aa20.59■□□□□ 0.89
IMP4-207ENST00000460100 MED1Q15648 1581 aaPredicted RBP20.59■□□□□ 0.89
IMP4-207ENST00000460100 SBNO2Q9Y2G9 1366 aa20.58■□□□□ 0.88
IMP4-207ENST00000460100 NUDT16Q96DE0 195 aaKnown RBP20.56■□□□□ 0.88
IMP4-207ENST00000460100 TOPAZ1Q8N9V7 1692 aa20.55■□□□□ 0.88
IMP4-207ENST00000460100 ITSN1Q15811 1721 aa20.55■□□□□ 0.88
IMP4-207ENST00000460100 SPATA31A6Q5VVP1 1343 aa20.54■□□□□ 0.88
IMP4-207ENST00000460100 PNPLA6Q8IY17 1366 aa20.54■□□□□ 0.88
IMP4-207ENST00000460100 CCDC61Q9Y6R9 512 aa20.53■□□□□ 0.88
IMP4-207ENST00000460100 PMFBP1Q8TBY8 1022 aa20.52■□□□□ 0.88
IMP4-207ENST00000460100 PLEKHG3A1L390 1219 aa20.51■□□□□ 0.87
IMP4-207ENST00000460100 XPCQ01831 940 aaPredicted RBP20.51■□□□□ 0.87
IMP4-207ENST00000460100 KRT28Q7Z3Y7 464 aa20.51■□□□□ 0.87
IMP4-207ENST00000460100 COL22A1Q8NFW1 1626 aaPredicted RBP20.51■□□□□ 0.87
IMP4-207ENST00000460100 EVC2Q86UK5 1308 aa20.51■□□□□ 0.87
IMP4-207ENST00000460100 LRP6O75581 1613 aa20.5■□□□□ 0.87
IMP4-207ENST00000460100 CABP2Q9NPB3 220 aa20.5■□□□□ 0.87
IMP4-207ENST00000460100 SPATA31A3Q5VYP0 1347 aa20.5■□□□□ 0.87
IMP4-207ENST00000460100 POLR3AO14802 1390 aaPredicted RBP20.49■□□□□ 0.87
IMP4-207ENST00000460100 TESK2Q96S53 571 aa20.49■□□□□ 0.87
IMP4-207ENST00000460100 SBNO1A3KN83 1393 aa20.48■□□□□ 0.87
IMP4-207ENST00000460100 TRPM3Q9HCF6 1732 aaPredicted RBP20.48■□□□□ 0.87
IMP4-207ENST00000460100 SRPK2P78362 688 aaKnown RBP20.48■□□□□ 0.87
IMP4-207ENST00000460100 DISP3Q9P2K9 1392 aa20.47■□□□□ 0.87
IMP4-207ENST00000460100 ST20-MTHFSA0A0A6YYL1 179 aa20.47■□□□□ 0.87
IMP4-207ENST00000460100 PSME1Q06323 249 aa20.47■□□□□ 0.87
IMP4-207ENST00000460100 USP47Q96K76 1375 aa20.46■□□□□ 0.87
IMP4-207ENST00000460100 TNS3Q68CZ2 1445 aa20.44■□□□□ 0.86
IMP4-207ENST00000460100 PPIP5K1Q6PFW1 1433 aa20.44■□□□□ 0.86
IMP4-207ENST00000460100 NGDNQ8NEJ9 315 aaKnown RBP20.44■□□□□ 0.86
IMP4-207ENST00000460100 PUS7Q96PZ0 661 aaKnown RBP20.44■□□□□ 0.86
IMP4-207ENST00000460100 ACEP12821 1306 aa20.44■□□□□ 0.86
IMP4-207ENST00000460100 ALS2Q96Q42 1657 aa20.43■□□□□ 0.86
IMP4-207ENST00000460100 SLC24A1O60721 1099 aa20.42■□□□□ 0.86
IMP4-207ENST00000460100 CABP1Q9NZU7 370 aa20.42■□□□□ 0.86
IMP4-207ENST00000460100 RGS17Q9UGC6 210 aaPredicted RBP20.42■□□□□ 0.86
IMP4-207ENST00000460100 ATAD2Q6PL18 1390 aa20.41■□□□□ 0.86
IMP4-207ENST00000460100 ARHGEF10O15013 1369 aa20.39■□□□□ 0.85
IMP4-207ENST00000460100 NUTM2BA6NNL0 878 aaPredicted RBP20.39■□□□□ 0.85
IMP4-207ENST00000460100 NUTM2EB1AL46 878 aaPredicted RBP20.39■□□□□ 0.85
IMP4-207ENST00000460100 NUTM2AQ8IVF1 878 aaPredicted RBP20.39■□□□□ 0.85
IMP4-207ENST00000460100 SSH2Q76I76 1423 aa20.37■□□□□ 0.85
IMP4-207ENST00000460100 BRD4O60885 1362 aaPredicted RBP20.37■□□□□ 0.85
IMP4-207ENST00000460100 CPSF1Q10570 1443 aaKnown RBP20.36■□□□□ 0.85
IMP4-207ENST00000460100 PHF23Q9BUL5 403 aaPredicted RBP20.36■□□□□ 0.85
IMP4-207ENST00000460100 USP6P35125 1406 aa20.36■□□□□ 0.85
IMP4-207ENST00000460100 AKAP12Q02952 1782 aa20.35■□□□□ 0.85
IMP4-207ENST00000460100 ABCA3Q99758 1704 aa20.35■□□□□ 0.85
IMP4-207ENST00000460100 MARF1Q9Y4F3 1742 aaKnown RBP20.34■□□□□ 0.85
IMP4-207ENST00000460100 CRYBG1Q9Y4K1 1723 aa20.34■□□□□ 0.85
IMP4-207ENST00000460100 CD163L1Q9NR16 1453 aa20.34■□□□□ 0.85
IMP4-207ENST00000460100 MEX3CQ5U5Q3 659 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms