RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 C1orf167Q5SNV9 1468 aa18.33■□□□□ 0.52
C4A-244ENST00000460060 RGS12O14924 1447 aa18.32■□□□□ 0.52
C4A-244ENST00000460060 KIF1BO60333 1816 aa18.31■□□□□ 0.52
C4A-244ENST00000460060 NGLY1Q96IV0 654 aa18.31■□□□□ 0.52
C4A-244ENST00000460060 SOS2Q07890 1332 aaPredicted RBP18.29■□□□□ 0.52
C4A-244ENST00000460060 VGFO15240 615 aaPredicted RBP18.29■□□□□ 0.52
C4A-244ENST00000460060 ADAMTS2O95450 1211 aa18.29■□□□□ 0.52
C4A-244ENST00000460060 L3MBTL2Q969R5 705 aa18.29■□□□□ 0.52
C4A-244ENST00000460060 ORAI2Q96SN7 254 aa18.29■□□□□ 0.52
C4A-244ENST00000460060 LAMC1P11047 1609 aa18.29■□□□□ 0.52
C4A-244ENST00000460060 PTCH1Q13635 1447 aa18.28■□□□□ 0.52
C4A-244ENST00000460060 ROBO2Q9HCK4 1378 aa18.27■□□□□ 0.51
C4A-244ENST00000460060 RGL3Q3MIN7 710 aa18.26■□□□□ 0.51
C4A-244ENST00000460060 SPATA31E1Q6ZUB1 1445 aa18.25■□□□□ 0.51
C4A-244ENST00000460060 USP21Q9UK80 565 aa18.25■□□□□ 0.51
C4A-244ENST00000460060 RPGRIP1LQ68CZ1 1315 aa18.24■□□□□ 0.51
C4A-244ENST00000460060 FNBP4Q8N3X1 1017 aaPredicted RBP18.24■□□□□ 0.51
C4A-244ENST00000460060 TRPC5Q9UL62 973 aaPredicted RBP18.24■□□□□ 0.51
C4A-244ENST00000460060 PRAG1Q86YV5 1406 aa18.23■□□□□ 0.51
C4A-244ENST00000460060 DCAF11Q8TEB1 546 aa18.21■□□□□ 0.51
C4A-244ENST00000460060 ATAD2Q6PL18 1390 aa18.2■□□□□ 0.5
C4A-244ENST00000460060 ATRNO75882 1429 aa18.19■□□□□ 0.5
C4A-244ENST00000460060 COL22A1Q8NFW1 1626 aaPredicted RBP18.19■□□□□ 0.5
C4A-244ENST00000460060 STAC3Q96MF2 364 aa18.18■□□□□ 0.5
C4A-244ENST00000460060 KDM2AQ9Y2K7 1162 aa18.18■□□□□ 0.5
C4A-244ENST00000460060 NPHP3Q7Z494 1330 aa18.18■□□□□ 0.5
C4A-244ENST00000460060 PPLO60437 1756 aa18.17■□□□□ 0.5
C4A-244ENST00000460060 ESCO1Q5FWF5 840 aa18.17■□□□□ 0.5
C4A-244ENST00000460060 MYOM2P54296 1465 aa18.16■□□□□ 0.5
C4A-244ENST00000460060 FOXO3O43524 673 aa18.14■□□□□ 0.49
C4A-244ENST00000460060 BCL9LQ86UU0 1499 aa18.14■□□□□ 0.49
C4A-244ENST00000460060 PXDNQ92626 1479 aa18.14■□□□□ 0.49
C4A-244ENST00000460060 NBPF8Q3BBV2 869 aa18.13■□□□□ 0.49
C4A-244ENST00000460060 CDC42BPGQ6DT37 1551 aa18.13■□□□□ 0.49
C4A-244ENST00000460060 XPCQ01831 940 aaPredicted RBP18.12■□□□□ 0.49
C4A-244ENST00000460060 ADGRF5Q8IZF2 1346 aa18.12■□□□□ 0.49
C4A-244ENST00000460060 MARF1Q9Y4F3 1742 aaKnown RBP18.12■□□□□ 0.49
C4A-244ENST00000460060 WAPLQ7Z5K2 1190 aa18.11■□□□□ 0.49
C4A-244ENST00000460060 CCDC125Q86Z20 511 aa18.11■□□□□ 0.49
C4A-244ENST00000460060 GJD4Q96KN9 370 aaPredicted RBP18.11■□□□□ 0.49
C4A-244ENST00000460060 LRPPRCP42704 1394 aaKnown RBP18.1■□□□□ 0.49
C4A-244ENST00000460060 ZRANB1Q9UGI0 708 aa18.1■□□□□ 0.49
C4A-244ENST00000460060 NUTM2FA1L443 756 aa18.09■□□□□ 0.49
C4A-244ENST00000460060 STK26Q9P289 416 aa18.09■□□□□ 0.49
C4A-244ENST00000460060 TECPR2O15040 1411 aa18.08■□□□□ 0.49
C4A-244ENST00000460060 ABCC11Q96J66 1382 aa18.07■□□□□ 0.48
C4A-244ENST00000460060 TMEM132EQ6IEE7 984 aa18.06■□□□□ 0.48
C4A-244ENST00000460060 UNC5CLQ8IV45 518 aa18.06■□□□□ 0.48
C4A-244ENST00000460060 PLEKHH1Q9ULM0 1364 aa18.05■□□□□ 0.48
C4A-244ENST00000460060 SPATA31A3Q5VYP0 1347 aa18.05■□□□□ 0.48
C4A-244ENST00000460060 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.04■□□□□ 0.48
C4A-244ENST00000460060 NRXN1Q9ULB1 1477 aa18.04■□□□□ 0.48
C4A-244ENST00000460060 SLIT2O94813 1529 aa18.03■□□□□ 0.48
C4A-244ENST00000460060 KRT28Q7Z3Y7 464 aa18.03■□□□□ 0.48
C4A-244ENST00000460060 KNDC1Q76NI1 1749 aa18.02■□□□□ 0.48
C4A-244ENST00000460060 SIRT1Q96EB6 747 aa18.02■□□□□ 0.48
C4A-244ENST00000460060 RALGAPBQ86X10 1494 aa18.01■□□□□ 0.47
C4A-244ENST00000460060 FMN2Q9NZ56 1722 aa18.01■□□□□ 0.47
C4A-244ENST00000460060 IFT172Q9UG01 1749 aa18.01■□□□□ 0.47
C4A-244ENST00000460060 GLI3P10071 1580 aa18.01■□□□□ 0.47
C4A-244ENST00000460060 KIF1AQ12756 1690 aa17.99■□□□□ 0.47
C4A-244ENST00000460060 PIK3C2GO75747 1445 aa17.99■□□□□ 0.47
C4A-244ENST00000460060 YTHDC2Q9H6S0 1430 aaKnown RBP17.99■□□□□ 0.47
C4A-244ENST00000460060 CFAP70Q5T0N1 1121 aa17.99■□□□□ 0.47
C4A-244ENST00000460060 C14orf93Q9H972 538 aaKnown RBP17.99■□□□□ 0.47
C4A-244ENST00000460060 SRCAPQ6ZRS2 3230 aa17.98■□□□□ 0.47
C4A-244ENST00000460060 BLMP54132 1417 aaPredicted RBP17.98■□□□□ 0.47
C4A-244ENST00000460060 BRWD3Q6RI45 1802 aa17.98■□□□□ 0.47
C4A-244ENST00000460060 NBPF1Q3BBV0 1214 aa17.98■□□□□ 0.47
C4A-244ENST00000460060 CARD11Q9BXL7 1154 aa17.98■□□□□ 0.47
C4A-244ENST00000460060 ROCK2O75116 1388 aaKnown RBP17.98■□□□□ 0.47
C4A-244ENST00000460060 RGPD8O14715 1765 aaPredicted RBP17.98■□□□□ 0.47
C4A-244ENST00000460060 EP400Q96L91 3159 aa17.98■□□□□ 0.47
C4A-244ENST00000460060 PSME1Q06323 249 aa17.97■□□□□ 0.47
C4A-244ENST00000460060 PHF8Q9UPP1 1060 aa17.97■□□□□ 0.47
C4A-244ENST00000460060 USP32Q8NFA0 1604 aa17.97■□□□□ 0.47
C4A-244ENST00000460060 GPRASP1Q5JY77 1395 aa17.96■□□□□ 0.47
C4A-244ENST00000460060 VPS72Q15906 364 aa17.96■□□□□ 0.47
C4A-244ENST00000460060 DEFB132Q7Z7B7 95 aa17.96■□□□□ 0.47
C4A-244ENST00000460060 SEPT12Q8IYM1 358 aa17.96■□□□□ 0.47
C4A-244ENST00000460060 ONECUT3O60422 494 aaPredicted RBP17.95■□□□□ 0.46
C4A-244ENST00000460060 HAP1P54257 671 aaPredicted RBP17.95■□□□□ 0.46
C4A-244ENST00000460060 CABLES1Q8TDN4 633 aa17.95■□□□□ 0.46
C4A-244ENST00000460060 TNS3Q68CZ2 1445 aa17.95■□□□□ 0.46
C4A-244ENST00000460060 EIF4G2P78344 907 aaKnown RBP eCLIP17.94■□□□□ 0.46
C4A-244ENST00000460060 TRPM1Q7Z4N2 1603 aa17.94■□□□□ 0.46
C4A-244ENST00000460060 SBNO1A3KN83 1393 aa17.93■□□□□ 0.46
C4A-244ENST00000460060 SF3B2Q13435 895 aaKnown RBP17.92■□□□□ 0.46
C4A-244ENST00000460060 PLEKHG5O94827 1062 aa17.91■□□□□ 0.46
C4A-244ENST00000460060 NWD2Q9ULI1 1742 aa17.91■□□□□ 0.46
C4A-244ENST00000460060 KIAA1210Q9ULL0 1709 aa17.9■□□□□ 0.46
C4A-244ENST00000460060 FAM83GA6ND36 823 aa17.9■□□□□ 0.46
C4A-244ENST00000460060 ZNF316A6NFI3 1004 aaPredicted RBP17.9■□□□□ 0.46
C4A-244ENST00000460060 HSPA5P11021 654 aaKnown RBP17.9■□□□□ 0.46
C4A-244ENST00000460060 LMOD2Q6P5Q4 547 aa17.9■□□□□ 0.46
C4A-244ENST00000460060 KRT27Q7Z3Y8 459 aa17.9■□□□□ 0.46
C4A-244ENST00000460060 CCDC9Q9Y3X0 531 aaKnown RBP17.9■□□□□ 0.46
C4A-244ENST00000460060 ARHGEF10O15013 1369 aa17.9■□□□□ 0.46
C4A-244ENST00000460060 USP47Q96K76 1375 aa17.9■□□□□ 0.46
C4A-244ENST00000460060 SAFB2Q14151 953 aaKnown RBP eCLIP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms