RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 RGPD8O14715 1765 aaPredicted RBP22.72■■□□□ 1.23
LMNA-209ENST00000459904 SOS2Q07890 1332 aaPredicted RBP22.72■■□□□ 1.23
LMNA-209ENST00000459904 MARF1Q9Y4F3 1742 aaKnown RBP22.71■■□□□ 1.23
LMNA-209ENST00000459904 RBM6P78332 1123 aaKnown RBP22.71■■□□□ 1.23
LMNA-209ENST00000459904 WAPLQ7Z5K2 1190 aa22.71■■□□□ 1.23
LMNA-209ENST00000459904 ESCO1Q5FWF5 840 aa22.69■■□□□ 1.22
LMNA-209ENST00000459904 COL22A1Q8NFW1 1626 aaPredicted RBP22.68■■□□□ 1.22
LMNA-209ENST00000459904 RPGRIP1LQ68CZ1 1315 aa22.68■■□□□ 1.22
LMNA-209ENST00000459904 TMEM132EQ6IEE7 984 aa22.68■■□□□ 1.22
LMNA-209ENST00000459904 USP21Q9UK80 565 aa22.68■■□□□ 1.22
LMNA-209ENST00000459904 PLEKHH1Q9ULM0 1364 aa22.67■■□□□ 1.22
LMNA-209ENST00000459904 CDC42BPGQ6DT37 1551 aa22.65■■□□□ 1.22
LMNA-209ENST00000459904 FOXO3O43524 673 aa22.65■■□□□ 1.22
LMNA-209ENST00000459904 PXDNQ92626 1479 aa22.64■■□□□ 1.21
LMNA-209ENST00000459904 PRAG1Q86YV5 1406 aa22.64■■□□□ 1.21
LMNA-209ENST00000459904 EP400Q96L91 3159 aa22.64■■□□□ 1.21
LMNA-209ENST00000459904 KNDC1Q76NI1 1749 aa22.62■■□□□ 1.21
LMNA-209ENST00000459904 FMN2Q9NZ56 1722 aa22.62■■□□□ 1.21
LMNA-209ENST00000459904 CCDC144AA2RUR9 1427 aa22.61■■□□□ 1.21
LMNA-209ENST00000459904 PLEKHG5O94827 1062 aa22.61■■□□□ 1.21
LMNA-209ENST00000459904 SPATA31E1Q6ZUB1 1445 aa22.61■■□□□ 1.21
LMNA-209ENST00000459904 MYOM2P54296 1465 aa22.6■■□□□ 1.21
LMNA-209ENST00000459904 ATRNO75882 1429 aa22.59■■□□□ 1.21
LMNA-209ENST00000459904 MPHOSPH9Q99550 1183 aa22.59■■□□□ 1.21
LMNA-209ENST00000459904 TRPC5Q9UL62 973 aaPredicted RBP22.59■■□□□ 1.21
LMNA-209ENST00000459904 FNBP4Q8N3X1 1017 aaPredicted RBP22.58■■□□□ 1.21
LMNA-209ENST00000459904 BRWD3Q6RI45 1802 aa22.58■■□□□ 1.21
LMNA-209ENST00000459904 SRCAPQ6ZRS2 3230 aa22.58■■□□□ 1.2
LMNA-209ENST00000459904 NPHP3Q7Z494 1330 aa22.57■■□□□ 1.2
LMNA-209ENST00000459904 BCL9LQ86UU0 1499 aa22.56■■□□□ 1.2
LMNA-209ENST00000459904 LRPPRCP42704 1394 aaKnown RBP22.56■■□□□ 1.2
LMNA-209ENST00000459904 ATAD2Q6PL18 1390 aa22.53■■□□□ 1.2
LMNA-209ENST00000459904 SAFB2Q14151 953 aaKnown RBP eCLIP22.53■■□□□ 1.2
LMNA-209ENST00000459904 TECPR2O15040 1411 aa22.53■■□□□ 1.2
LMNA-209ENST00000459904 PIK3C2GO75747 1445 aa22.53■■□□□ 1.2
LMNA-209ENST00000459904 YTHDC2Q9H6S0 1430 aaKnown RBP22.52■■□□□ 1.2
LMNA-209ENST00000459904 ABCC11Q96J66 1382 aa22.51■■□□□ 1.19
LMNA-209ENST00000459904 KIF1AQ12756 1690 aa22.51■■□□□ 1.19
LMNA-209ENST00000459904 ANKRD30BQ9BXX2 1392 aa22.5■■□□□ 1.19
LMNA-209ENST00000459904 GLI3P10071 1580 aa22.5■■□□□ 1.19
LMNA-209ENST00000459904 CFAP70Q5T0N1 1121 aa22.5■■□□□ 1.19
LMNA-209ENST00000459904 CABLES1Q8TDN4 633 aa22.5■■□□□ 1.19
LMNA-209ENST00000459904 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.5■■□□□ 1.19
LMNA-209ENST00000459904 ABCA3Q99758 1704 aa22.48■■□□□ 1.19
LMNA-209ENST00000459904 KRT28Q7Z3Y7 464 aa22.48■■□□□ 1.19
LMNA-209ENST00000459904 SPATA31A3Q5VYP0 1347 aa22.48■■□□□ 1.19
LMNA-209ENST00000459904 USP32Q8NFA0 1604 aa22.47■■□□□ 1.19
LMNA-209ENST00000459904 GJD4Q96KN9 370 aaPredicted RBP22.47■■□□□ 1.19
LMNA-209ENST00000459904 PLCH1Q4KWH8 1693 aa22.46■■□□□ 1.19
LMNA-209ENST00000459904 RALGAPBQ86X10 1494 aa22.44■■□□□ 1.18
LMNA-209ENST00000459904 SLIT2O94813 1529 aa22.43■■□□□ 1.18
LMNA-209ENST00000459904 LMOD2Q6P5Q4 547 aa22.43■■□□□ 1.18
LMNA-209ENST00000459904 C14orf93Q9H972 538 aaKnown RBP22.43■■□□□ 1.18
LMNA-209ENST00000459904 PHF8Q9UPP1 1060 aa22.43■■□□□ 1.18
LMNA-209ENST00000459904 PRAM1Q96QH2 718 aa22.42■■□□□ 1.18
LMNA-209ENST00000459904 UNC5CLQ8IV45 518 aa22.41■■□□□ 1.18
LMNA-209ENST00000459904 PMFBP1Q8TBY8 1022 aa22.41■■□□□ 1.18
LMNA-209ENST00000459904 HAP1P54257 671 aaPredicted RBP22.4■■□□□ 1.18
LMNA-209ENST00000459904 HIRIP3Q9BW71 556 aaPredicted RBP22.39■■□□□ 1.17
LMNA-209ENST00000459904 NRXN1Q9ULB1 1477 aa22.39■■□□□ 1.17
LMNA-209ENST00000459904 TNS3Q68CZ2 1445 aa22.39■■□□□ 1.17
LMNA-209ENST00000459904 DHX57Q6P158 1386 aaKnown RBP22.38■■□□□ 1.17
LMNA-209ENST00000459904 DEFB132Q7Z7B7 95 aa22.36■■□□□ 1.17
LMNA-209ENST00000459904 ZRANB1Q9UGI0 708 aa22.36■■□□□ 1.17
LMNA-209ENST00000459904 CCDC9Q9Y3X0 531 aaKnown RBP22.36■■□□□ 1.17
LMNA-209ENST00000459904 TRPM3Q9HCF6 1732 aaPredicted RBP22.36■■□□□ 1.17
LMNA-209ENST00000459904 NWD2Q9ULI1 1742 aa22.36■■□□□ 1.17
LMNA-209ENST00000459904 TRAK1Q9UPV9 953 aa22.35■■□□□ 1.17
LMNA-209ENST00000459904 KDM2AQ9Y2K7 1162 aa22.35■■□□□ 1.17
LMNA-209ENST00000459904 PSME1Q06323 249 aa22.34■■□□□ 1.17
LMNA-209ENST00000459904 SEPT12Q8IYM1 358 aa22.34■■□□□ 1.17
LMNA-209ENST00000459904 SIRT1Q96EB6 747 aa22.34■■□□□ 1.17
LMNA-209ENST00000459904 POGKQ9P215 609 aa22.34■■□□□ 1.17
LMNA-209ENST00000459904 RAB3GAP2Q9H2M9 1393 aa22.34■■□□□ 1.17
LMNA-209ENST00000459904 MINK1Q8N4C8 1332 aaPredicted RBP22.33■■□□□ 1.17
LMNA-209ENST00000459904 NRAPQ86VF7 1730 aa22.33■■□□□ 1.17
LMNA-209ENST00000459904 FAM83GA6ND36 823 aa22.32■■□□□ 1.16
LMNA-209ENST00000459904 ALS2Q96Q42 1657 aa22.31■■□□□ 1.16
LMNA-209ENST00000459904 ADGRB1O14514 1584 aa22.31■■□□□ 1.16
LMNA-209ENST00000459904 PRR36Q9H6K5 1346 aa22.3■■□□□ 1.16
LMNA-209ENST00000459904 SBNO1A3KN83 1393 aa22.29■■□□□ 1.16
LMNA-209ENST00000459904 DLC1Q96QB1 1528 aa22.29■■□□□ 1.16
LMNA-209ENST00000459904 ADGRB2O60241 1585 aa22.29■■□□□ 1.16
LMNA-209ENST00000459904 VPS72Q15906 364 aa22.28■■□□□ 1.16
LMNA-209ENST00000459904 BLMP54132 1417 aaPredicted RBP22.27■■□□□ 1.16
LMNA-209ENST00000459904 CCDC125Q86Z20 511 aa22.27■■□□□ 1.16
LMNA-209ENST00000459904 CRYBG1Q9Y4K1 1723 aa22.27■■□□□ 1.16
LMNA-209ENST00000459904 A0A0G2JS52 829 aa22.26■■□□□ 1.15
LMNA-209ENST00000459904 MYT1Q01538 1121 aa22.26■■□□□ 1.15
LMNA-209ENST00000459904 FAM182BQ5T319 152 aa22.26■■□□□ 1.15
LMNA-209ENST00000459904 DCAF11Q8TEB1 546 aa22.25■■□□□ 1.15
LMNA-209ENST00000459904 ARHGEF28Q8N1W1 1705 aaKnown RBP22.25■■□□□ 1.15
LMNA-209ENST00000459904 FAM98CQ17RN3 349 aaKnown RBP22.24■■□□□ 1.15
LMNA-209ENST00000459904 ARHGEF10O15013 1369 aa22.24■■□□□ 1.15
LMNA-209ENST00000459904 ANKARQ7Z5J8 1434 aa22.23■■□□□ 1.15
LMNA-209ENST00000459904 KRT27Q7Z3Y8 459 aa22.23■■□□□ 1.15
LMNA-209ENST00000459904 BTG4Q9NY30 223 aa22.23■■□□□ 1.15
LMNA-209ENST00000459904 COL14A1Q05707 1796 aaKnown RBP22.22■■□□□ 1.15
LMNA-209ENST00000459904 PAK3O75914 559 aaPredicted RBP22.21■■□□□ 1.15
LMNA-209ENST00000459904 TULP4Q9NRJ4 1543 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms