RNA–Protein interactions for RNA: ENST00000459852.1

RAPGEF4-205, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 5

Gene RAPGEF4, Length 560 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-205ENST00000459852 RXRBP28702 533 aa20.62■□□□□ 0.89
RAPGEF4-205ENST00000459852 PIK3C2GO75747 1445 aa20.61■□□□□ 0.89
RAPGEF4-205ENST00000459852 LRPPRCP42704 1394 aaKnown RBP20.6■□□□□ 0.89
RAPGEF4-205ENST00000459852 RGL3Q3MIN7 710 aa20.6■□□□□ 0.89
RAPGEF4-205ENST00000459852 COL22A1Q8NFW1 1626 aaPredicted RBP20.6■□□□□ 0.89
RAPGEF4-205ENST00000459852 ABCC11Q96J66 1382 aa20.59■□□□□ 0.89
RAPGEF4-205ENST00000459852 C8orf37Q96NL8 207 aa20.58■□□□□ 0.89
RAPGEF4-205ENST00000459852 UPF1Q92900 1129 aaKnown RBP eCLIP20.55■□□□□ 0.88
RAPGEF4-205ENST00000459852 PXDNQ92626 1479 aa20.55■□□□□ 0.88
RAPGEF4-205ENST00000459852 NPHP3Q7Z494 1330 aa20.54■□□□□ 0.88
RAPGEF4-205ENST00000459852 STK26Q9P289 416 aa20.54■□□□□ 0.88
RAPGEF4-205ENST00000459852 NRXN1Q9ULB1 1477 aa20.54■□□□□ 0.88
RAPGEF4-205ENST00000459852 YTHDC2Q9H6S0 1430 aaKnown RBP20.53■□□□□ 0.88
RAPGEF4-205ENST00000459852 RBM6P78332 1123 aaKnown RBP20.53■□□□□ 0.88
RAPGEF4-205ENST00000459852 ESCO1Q5FWF5 840 aa20.53■□□□□ 0.88
RAPGEF4-205ENST00000459852 WAPLQ7Z5K2 1190 aa20.53■□□□□ 0.88
RAPGEF4-205ENST00000459852 MYOM2P54296 1465 aa20.53■□□□□ 0.88
RAPGEF4-205ENST00000459852 FMN2Q9NZ56 1722 aa20.53■□□□□ 0.88
RAPGEF4-205ENST00000459852 RGS12O14924 1447 aa20.53■□□□□ 0.88
RAPGEF4-205ENST00000459852 PLEKHH1Q9ULM0 1364 aa20.52■□□□□ 0.88
RAPGEF4-205ENST00000459852 ADAMTS2O95450 1211 aa20.52■□□□□ 0.88
RAPGEF4-205ENST00000459852 TMEM132EQ6IEE7 984 aa20.52■□□□□ 0.88
RAPGEF4-205ENST00000459852 NGLY1Q96IV0 654 aa20.52■□□□□ 0.88
RAPGEF4-205ENST00000459852 QTRT2Q9H974 415 aaKnown RBP20.52■□□□□ 0.88
RAPGEF4-205ENST00000459852 SIRT1Q96EB6 747 aa20.5■□□□□ 0.87
RAPGEF4-205ENST00000459852 KIF1AQ12756 1690 aa20.5■□□□□ 0.87
RAPGEF4-205ENST00000459852 C14orf93Q9H972 538 aaKnown RBP20.49■□□□□ 0.87
RAPGEF4-205ENST00000459852 MARF1Q9Y4F3 1742 aaKnown RBP20.48■□□□□ 0.87
RAPGEF4-205ENST00000459852 RAB3GAP2Q9H2M9 1393 aa20.47■□□□□ 0.87
RAPGEF4-205ENST00000459852 FOXO3O43524 673 aa20.47■□□□□ 0.87
RAPGEF4-205ENST00000459852 FNBP4Q8N3X1 1017 aaPredicted RBP20.47■□□□□ 0.87
RAPGEF4-205ENST00000459852 USP21Q9UK80 565 aa20.46■□□□□ 0.87
RAPGEF4-205ENST00000459852 DHX57Q6P158 1386 aaKnown RBP20.45■□□□□ 0.86
RAPGEF4-205ENST00000459852 ATRNO75882 1429 aa20.44■□□□□ 0.86
RAPGEF4-205ENST00000459852 NUTM2FA1L443 756 aa20.44■□□□□ 0.86
RAPGEF4-205ENST00000459852 XPCQ01831 940 aaPredicted RBP20.44■□□□□ 0.86
RAPGEF4-205ENST00000459852 TRPC5Q9UL62 973 aaPredicted RBP20.44■□□□□ 0.86
RAPGEF4-205ENST00000459852 CFAP70Q5T0N1 1121 aa20.43■□□□□ 0.86
RAPGEF4-205ENST00000459852 DLC1Q96QB1 1528 aa20.43■□□□□ 0.86
RAPGEF4-205ENST00000459852 BCL9LQ86UU0 1499 aa20.41■□□□□ 0.86
RAPGEF4-205ENST00000459852 RGPD8O14715 1765 aaPredicted RBP20.41■□□□□ 0.86
RAPGEF4-205ENST00000459852 ADGRB1O14514 1584 aa20.4■□□□□ 0.86
RAPGEF4-205ENST00000459852 SPATA31A3Q5VYP0 1347 aa20.4■□□□□ 0.86
RAPGEF4-205ENST00000459852 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.39■□□□□ 0.86
RAPGEF4-205ENST00000459852 ADGRB2O60241 1585 aa20.38■□□□□ 0.85
RAPGEF4-205ENST00000459852 ATAD2Q6PL18 1390 aa20.37■□□□□ 0.85
RAPGEF4-205ENST00000459852 PRAM1Q96QH2 718 aa20.37■□□□□ 0.85
RAPGEF4-205ENST00000459852 USP32Q8NFA0 1604 aa20.36■□□□□ 0.85
RAPGEF4-205ENST00000459852 PHF8Q9UPP1 1060 aa20.36■□□□□ 0.85
RAPGEF4-205ENST00000459852 TNS3Q68CZ2 1445 aa20.36■□□□□ 0.85
RAPGEF4-205ENST00000459852 ANKARQ7Z5J8 1434 aa20.36■□□□□ 0.85
RAPGEF4-205ENST00000459852 KRT28Q7Z3Y7 464 aa20.35■□□□□ 0.85
RAPGEF4-205ENST00000459852 SLIT2O94813 1529 aa20.35■□□□□ 0.85
RAPGEF4-205ENST00000459852 SBNO1A3KN83 1393 aa20.34■□□□□ 0.85
RAPGEF4-205ENST00000459852 HRCP23327 699 aa20.32■□□□□ 0.84
RAPGEF4-205ENST00000459852 PSME1Q06323 249 aa20.32■□□□□ 0.84
RAPGEF4-205ENST00000459852 SAFB2Q14151 953 aaKnown RBP eCLIP20.32■□□□□ 0.84
RAPGEF4-205ENST00000459852 POGKQ9P215 609 aa20.32■□□□□ 0.84
RAPGEF4-205ENST00000459852 ABCA3Q99758 1704 aa20.31■□□□□ 0.84
RAPGEF4-205ENST00000459852 GJD4Q96KN9 370 aaPredicted RBP20.31■□□□□ 0.84
RAPGEF4-205ENST00000459852 STAC3Q96MF2 364 aa20.31■□□□□ 0.84
RAPGEF4-205ENST00000459852 UNC5CLQ8IV45 518 aa20.3■□□□□ 0.84
RAPGEF4-205ENST00000459852 GLI3P10071 1580 aa20.29■□□□□ 0.84
RAPGEF4-205ENST00000459852 ARHGEF10O15013 1369 aa20.29■□□□□ 0.84
RAPGEF4-205ENST00000459852 DCAF11Q8TEB1 546 aa20.28■□□□□ 0.84
RAPGEF4-205ENST00000459852 EIF3AQ14152 1382 aaKnown RBP20.28■□□□□ 0.84
RAPGEF4-205ENST00000459852 RALGAPBQ86X10 1494 aa20.28■□□□□ 0.84
RAPGEF4-205ENST00000459852 NWD2Q9ULI1 1742 aa20.27■□□□□ 0.84
RAPGEF4-205ENST00000459852 PLCH1Q4KWH8 1693 aa20.27■□□□□ 0.84
RAPGEF4-205ENST00000459852 TRAK1Q9UPV9 953 aa20.27■□□□□ 0.84
RAPGEF4-205ENST00000459852 TRPM3Q9HCF6 1732 aaPredicted RBP20.27■□□□□ 0.83
RAPGEF4-205ENST00000459852 TULP4Q9NRJ4 1543 aa20.27■□□□□ 0.83
RAPGEF4-205ENST00000459852 KDM2AQ9Y2K7 1162 aa20.26■□□□□ 0.83
RAPGEF4-205ENST00000459852 ARHGEF28Q8N1W1 1705 aaKnown RBP20.24■□□□□ 0.83
RAPGEF4-205ENST00000459852 HAP1P54257 671 aaPredicted RBP20.24■□□□□ 0.83
RAPGEF4-205ENST00000459852 PMFBP1Q8TBY8 1022 aa20.24■□□□□ 0.83
RAPGEF4-205ENST00000459852 CABLES1Q8TDN4 633 aa20.24■□□□□ 0.83
RAPGEF4-205ENST00000459852 ALS2Q96Q42 1657 aa20.23■□□□□ 0.83
RAPGEF4-205ENST00000459852 HIRIP3Q9BW71 556 aaPredicted RBP20.23■□□□□ 0.83
RAPGEF4-205ENST00000459852 MINK1Q8N4C8 1332 aaPredicted RBP20.23■□□□□ 0.83
RAPGEF4-205ENST00000459852 PRR36Q9H6K5 1346 aa20.23■□□□□ 0.83
RAPGEF4-205ENST00000459852 CCDC125Q86Z20 511 aa20.22■□□□□ 0.83
RAPGEF4-205ENST00000459852 EP400Q96L91 3159 aa20.22■□□□□ 0.83
RAPGEF4-205ENST00000459852 WASLO00401 505 aaPredicted RBP20.21■□□□□ 0.83
RAPGEF4-205ENST00000459852 VPS72Q15906 364 aa20.21■□□□□ 0.83
RAPGEF4-205ENST00000459852 LMOD2Q6P5Q4 547 aa20.21■□□□□ 0.83
RAPGEF4-205ENST00000459852 GPRASP1Q5JY77 1395 aa20.21■□□□□ 0.83
RAPGEF4-205ENST00000459852 BRWD3Q6RI45 1802 aa20.2■□□□□ 0.82
RAPGEF4-205ENST00000459852 ITSN1Q15811 1721 aa20.19■□□□□ 0.82
RAPGEF4-205ENST00000459852 NRAPQ86VF7 1730 aa20.19■□□□□ 0.82
RAPGEF4-205ENST00000459852 KIAA1210Q9ULL0 1709 aa20.18■□□□□ 0.82
RAPGEF4-205ENST00000459852 CRYBG1Q9Y4K1 1723 aa20.17■□□□□ 0.82
RAPGEF4-205ENST00000459852 ATP7BP35670 1465 aa20.17■□□□□ 0.82
RAPGEF4-205ENST00000459852 COL14A1Q05707 1796 aaKnown RBP20.16■□□□□ 0.82
RAPGEF4-205ENST00000459852 FAM83GA6ND36 823 aa20.16■□□□□ 0.82
RAPGEF4-205ENST00000459852 ONECUT3O60422 494 aaPredicted RBP20.16■□□□□ 0.82
RAPGEF4-205ENST00000459852 PLEKHG5O94827 1062 aa20.16■□□□□ 0.82
RAPGEF4-205ENST00000459852 SEPT12Q8IYM1 358 aa20.15■□□□□ 0.82
RAPGEF4-205ENST00000459852 BLMP54132 1417 aaPredicted RBP20.15■□□□□ 0.82
RAPGEF4-205ENST00000459852 NGDNQ8NEJ9 315 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms