RNA–Protein interactions for RNA: ENST00000459799.1

SCNM1-203, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-203ENST00000459799 ANKRD50Q9ULJ7 1429 aa14.24□□□□□ -0.13
SCNM1-203ENST00000459799 DEFB132Q7Z7B7 95 aa14.23□□□□□ -0.13
SCNM1-203ENST00000459799 RALGAPBQ86X10 1494 aa14.22□□□□□ -0.13
SCNM1-203ENST00000459799 GJD4Q96KN9 370 aaPredicted RBP14.21□□□□□ -0.13
SCNM1-203ENST00000459799 PXDNQ92626 1479 aa14.2□□□□□ -0.14
SCNM1-203ENST00000459799 ORAI2Q96SN7 254 aa14.19□□□□□ -0.14
SCNM1-203ENST00000459799 SLIT2O94813 1529 aa14.18□□□□□ -0.14
SCNM1-203ENST00000459799 NEXMIFQ5QGS0 1516 aa14.18□□□□□ -0.14
SCNM1-203ENST00000459799 PRAG1Q86YV5 1406 aa14.16□□□□□ -0.14
SCNM1-203ENST00000459799 USP32Q8NFA0 1604 aa14.16□□□□□ -0.14
SCNM1-203ENST00000459799 PSDA5PKW4 1024 aaPredicted RBP14.16□□□□□ -0.14
SCNM1-203ENST00000459799 HRCP23327 699 aa14.16□□□□□ -0.14
SCNM1-203ENST00000459799 RNF39Q9H2S5 420 aa14.16□□□□□ -0.14
SCNM1-203ENST00000459799 PLCH1Q4KWH8 1693 aa14.16□□□□□ -0.14
SCNM1-203ENST00000459799 CDC42BPGQ6DT37 1551 aa14.15□□□□□ -0.14
SCNM1-203ENST00000459799 DCAF8L1A6NGE4 600 aa14.14□□□□□ -0.15
SCNM1-203ENST00000459799 ROBO2Q9HCK4 1378 aa14.13□□□□□ -0.15
SCNM1-203ENST00000459799 RGPD1P0DJD0 1748 aa14.12□□□□□ -0.15
SCNM1-203ENST00000459799 NWD2Q9ULI1 1742 aa14.12□□□□□ -0.15
SCNM1-203ENST00000459799 SF3B2Q13435 895 aaKnown RBP14.12□□□□□ -0.15
SCNM1-203ENST00000459799 UNC5CLQ8IV45 518 aa14.11□□□□□ -0.15
SCNM1-203ENST00000459799 ABCA3Q99758 1704 aa14.11□□□□□ -0.15
SCNM1-203ENST00000459799 TNS1Q9HBL0 1735 aaKnown RBP14.11□□□□□ -0.15
SCNM1-203ENST00000459799 CLTCL1P53675 1640 aa14.11□□□□□ -0.15
SCNM1-203ENST00000459799 NPHP3Q7Z494 1330 aa14.1□□□□□ -0.15
SCNM1-203ENST00000459799 SEPT12Q8IYM1 358 aa14.09□□□□□ -0.15
SCNM1-203ENST00000459799 NRAPQ86VF7 1730 aa14.07□□□□□ -0.16
SCNM1-203ENST00000459799 HFM1A2PYH4 1435 aa14.07□□□□□ -0.16
SCNM1-203ENST00000459799 KIF1BO60333 1816 aa14.06□□□□□ -0.16
SCNM1-203ENST00000459799 XPCQ01831 940 aaPredicted RBP14.06□□□□□ -0.16
SCNM1-203ENST00000459799 KIF1AQ12756 1690 aa14.05□□□□□ -0.16
SCNM1-203ENST00000459799 YY1P25490 414 aa14.05□□□□□ -0.16
SCNM1-203ENST00000459799 BAG6P46379 1132 aa14.05□□□□□ -0.16
SCNM1-203ENST00000459799 ZNF326Q5BKZ1 582 aaKnown RBP14.05□□□□□ -0.16
SCNM1-203ENST00000459799 KRT27Q7Z3Y8 459 aa14.05□□□□□ -0.16
SCNM1-203ENST00000459799 ONECUT3O60422 494 aaPredicted RBP14.04□□□□□ -0.16
SCNM1-203ENST00000459799 DISP2A7MBM2 1401 aa14.04□□□□□ -0.16
SCNM1-203ENST00000459799 FOXO3O43524 673 aa14.03□□□□□ -0.16
SCNM1-203ENST00000459799 VPS72Q15906 364 aa14.03□□□□□ -0.16
SCNM1-203ENST00000459799 ESCO1Q5FWF5 840 aa14.03□□□□□ -0.16
SCNM1-203ENST00000459799 NUP155O75694 1391 aa14.03□□□□□ -0.16
SCNM1-203ENST00000459799 FMN2Q9NZ56 1722 aa14.03□□□□□ -0.16
SCNM1-203ENST00000459799 R3HDM1Q15032 1099 aaKnown RBP14.02□□□□□ -0.17
SCNM1-203ENST00000459799 PPLO60437 1756 aa14.01□□□□□ -0.17
SCNM1-203ENST00000459799 ROCK1Q13464 1354 aa14.01□□□□□ -0.17
SCNM1-203ENST00000459799 SPATA31A3Q5VYP0 1347 aa14.01□□□□□ -0.17
SCNM1-203ENST00000459799 HOXD11P31277 338 aaPredicted RBP14.01□□□□□ -0.17
SCNM1-203ENST00000459799 RREB1Q92766 1687 aa14.01□□□□□ -0.17
SCNM1-203ENST00000459799 THSD7AQ9UPZ6 1657 aa14.01□□□□□ -0.17
SCNM1-203ENST00000459799 ADGRB2O60241 1585 aa14□□□□□ -0.17
SCNM1-203ENST00000459799 NAIPQ13075 1403 aa14□□□□□ -0.17
SCNM1-203ENST00000459799 LRPPRCP42704 1394 aaKnown RBP14□□□□□ -0.17
SCNM1-203ENST00000459799 EN1Q05925 392 aaPredicted RBP14□□□□□ -0.17
SCNM1-203ENST00000459799 FAM50AQ14320 339 aaKnown RBP14□□□□□ -0.17
SCNM1-203ENST00000459799 CCDC144AA2RUR9 1427 aa13.99□□□□□ -0.17
SCNM1-203ENST00000459799 NUP188Q5SRE5 1749 aa13.99□□□□□ -0.17
SCNM1-203ENST00000459799 TNS3Q68CZ2 1445 aa13.98□□□□□ -0.17
SCNM1-203ENST00000459799 KNDC1Q76NI1 1749 aa13.98□□□□□ -0.17
SCNM1-203ENST00000459799 CAMTA1Q9Y6Y1 1673 aa13.98□□□□□ -0.17
SCNM1-203ENST00000459799 RGPD8O14715 1765 aaPredicted RBP13.97□□□□□ -0.17
SCNM1-203ENST00000459799 IFT172Q9UG01 1749 aa13.97□□□□□ -0.17
SCNM1-203ENST00000459799 CCDC9Q9Y3X0 531 aaKnown RBP13.95□□□□□ -0.18
SCNM1-203ENST00000459799 TECPR2O15040 1411 aa13.95□□□□□ -0.18
SCNM1-203ENST00000459799 APLP2Q06481 763 aa13.94□□□□□ -0.18
SCNM1-203ENST00000459799 UTRNP46939 3433 aa13.94□□□□□ -0.18
SCNM1-203ENST00000459799 COL14A1Q05707 1796 aaKnown RBP13.94□□□□□ -0.18
SCNM1-203ENST00000459799 A0A0G2JS52 829 aa13.93□□□□□ -0.18
SCNM1-203ENST00000459799 NUTM2FA1L443 756 aa13.93□□□□□ -0.18
SCNM1-203ENST00000459799 MYT1Q01538 1121 aa13.93□□□□□ -0.18
SCNM1-203ENST00000459799 EZH2Q15910 746 aaKnown RBP13.93□□□□□ -0.18
SCNM1-203ENST00000459799 FAM98CQ17RN3 349 aaKnown RBP13.93□□□□□ -0.18
SCNM1-203ENST00000459799 FAM182BQ5T319 152 aa13.93□□□□□ -0.18
SCNM1-203ENST00000459799 CABLES1Q8TDN4 633 aa13.93□□□□□ -0.18
SCNM1-203ENST00000459799 CRYBG1Q9Y4K1 1723 aa13.92□□□□□ -0.18
SCNM1-203ENST00000459799 TRPM3Q9HCF6 1732 aaPredicted RBP13.91□□□□□ -0.18
SCNM1-203ENST00000459799 LOC105371045A0A1W2PR82 267 aa13.9□□□□□ -0.18
SCNM1-203ENST00000459799 VGFO15240 615 aaPredicted RBP13.9□□□□□ -0.18
SCNM1-203ENST00000459799 HAP1P54257 671 aaPredicted RBP13.9□□□□□ -0.18
SCNM1-203ENST00000459799 C1QBPQ07021 282 aaKnown RBP13.9□□□□□ -0.18
SCNM1-203ENST00000459799 CAMKK2Q96RR4 588 aa13.9□□□□□ -0.18
SCNM1-203ENST00000459799 PARD3Q8TEW0 1356 aa13.9□□□□□ -0.18
SCNM1-203ENST00000459799 ALS2Q96Q42 1657 aa13.89□□□□□ -0.19
SCNM1-203ENST00000459799 NRXN1Q9ULB1 1477 aa13.89□□□□□ -0.19
SCNM1-203ENST00000459799 PLEKHH1Q9ULM0 1364 aa13.89□□□□□ -0.19
SCNM1-203ENST00000459799 NINLQ9Y2I6 1382 aa13.89□□□□□ -0.19
SCNM1-203ENST00000459799 FAM83GA6ND36 823 aa13.89□□□□□ -0.19
SCNM1-203ENST00000459799 KRT28Q7Z3Y7 464 aa13.89□□□□□ -0.19
SCNM1-203ENST00000459799 CEP350Q5VT06 3117 aa13.89□□□□□ -0.19
SCNM1-203ENST00000459799 SBNO1A3KN83 1393 aa13.88□□□□□ -0.19
SCNM1-203ENST00000459799 ARHGEF10O15013 1369 aa13.88□□□□□ -0.19
SCNM1-203ENST00000459799 IFFO2Q5TF58 517 aa13.88□□□□□ -0.19
SCNM1-203ENST00000459799 PLEKHG5O94827 1062 aa13.87□□□□□ -0.19
SCNM1-203ENST00000459799 WAPLQ7Z5K2 1190 aa13.87□□□□□ -0.19
SCNM1-203ENST00000459799 RRBP1Q9P2E9 1410 aaKnown RBP13.86□□□□□ -0.19
SCNM1-203ENST00000459799 SPATA31A5Q5VU36 1347 aa13.86□□□□□ -0.19
SCNM1-203ENST00000459799 SPATA31A7Q8IWB4 1347 aa13.86□□□□□ -0.19
SCNM1-203ENST00000459799 CASZ1Q86V15 1759 aa13.86□□□□□ -0.19
SCNM1-203ENST00000459799 BTG4Q9NY30 223 aa13.85□□□□□ -0.19
SCNM1-203ENST00000459799 RPGRIP1LQ68CZ1 1315 aa13.85□□□□□ -0.19
SCNM1-203ENST00000459799 NRKQ7Z2Y5 1582 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms