RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.9■■□□□ 1.74
TRIM13-206ENST00000457662 SLAIN2Q9P270 581 aa25.9■■□□□ 1.74
TRIM13-206ENST00000457662 PIP4K2BP78356 416 aa25.89■■□□□ 1.73
TRIM13-206ENST00000457662 GPRASP1Q5JY77 1395 aa25.88■■□□□ 1.73
TRIM13-206ENST00000457662 SAFB2Q14151 953 aaKnown RBP eCLIP25.88■■□□□ 1.73
TRIM13-206ENST00000457662 SCAF1Q9H7N4 1312 aaKnown RBP25.87■■□□□ 1.73
TRIM13-206ENST00000457662 RALGAPBQ86X10 1494 aa25.87■■□□□ 1.73
TRIM13-206ENST00000457662 CARD11Q9BXL7 1154 aa25.86■■□□□ 1.73
TRIM13-206ENST00000457662 NALCNQ8IZF0 1738 aa25.86■■□□□ 1.73
TRIM13-206ENST00000457662 ILDR1Q86SU0 546 aaPredicted RBP25.85■■□□□ 1.73
TRIM13-206ENST00000457662 ARHGEF28Q8N1W1 1705 aaKnown RBP25.82■■□□□ 1.72
TRIM13-206ENST00000457662 CENPJQ9HC77 1338 aaPredicted RBP25.8■■□□□ 1.72
TRIM13-206ENST00000457662 MINK1Q8N4C8 1332 aaPredicted RBP25.79■■□□□ 1.72
TRIM13-206ENST00000457662 CDC42BPGQ6DT37 1551 aa25.79■■□□□ 1.72
TRIM13-206ENST00000457662 EIF3AQ14152 1382 aaKnown RBP25.79■■□□□ 1.72
TRIM13-206ENST00000457662 MST1RQ04912 1400 aa25.78■■□□□ 1.72
TRIM13-206ENST00000457662 HIRIP3Q9BW71 556 aaPredicted RBP25.77■■□□□ 1.72
TRIM13-206ENST00000457662 WASLO00401 505 aaPredicted RBP25.74■■□□□ 1.71
TRIM13-206ENST00000457662 C1orf167Q5SNV9 1468 aa25.74■■□□□ 1.71
TRIM13-206ENST00000457662 BRINP3Q76B58 766 aa25.72■■□□□ 1.71
TRIM13-206ENST00000457662 ADGRB2O60241 1585 aa25.72■■□□□ 1.71
TRIM13-206ENST00000457662 NUTM2FA1L443 756 aa25.72■■□□□ 1.71
TRIM13-206ENST00000457662 ROBO1Q9Y6N7 1651 aa25.7■■□□□ 1.7
TRIM13-206ENST00000457662 ORAI2Q96SN7 254 aa25.69■■□□□ 1.7
TRIM13-206ENST00000457662 FMN2Q9NZ56 1722 aa25.68■■□□□ 1.7
TRIM13-206ENST00000457662 ESCO1Q5FWF5 840 aa25.68■■□□□ 1.7
TRIM13-206ENST00000457662 CDK19Q9BWU1 502 aa25.68■■□□□ 1.7
TRIM13-206ENST00000457662 HSPA1LP34931 641 aa25.67■■□□□ 1.7
TRIM13-206ENST00000457662 QRICH2Q9H0J4 1663 aa25.65■■□□□ 1.7
TRIM13-206ENST00000457662 ST20-MTHFSA0A0A6YYL1 179 aa25.65■■□□□ 1.7
TRIM13-206ENST00000457662 SLC24A1O60721 1099 aa25.65■■□□□ 1.7
TRIM13-206ENST00000457662 ANKARQ7Z5J8 1434 aa25.65■■□□□ 1.7
TRIM13-206ENST00000457662 SBNO2Q9Y2G9 1366 aa25.64■■□□□ 1.7
TRIM13-206ENST00000457662 EVC2Q86UK5 1308 aa25.64■■□□□ 1.69
TRIM13-206ENST00000457662 USP47Q96K76 1375 aa25.63■■□□□ 1.69
TRIM13-206ENST00000457662 SRPK2P78362 688 aaKnown RBP25.62■■□□□ 1.69
TRIM13-206ENST00000457662 NUDT16Q96DE0 195 aaKnown RBP25.62■■□□□ 1.69
TRIM13-206ENST00000457662 TULP4Q9NRJ4 1543 aa25.61■■□□□ 1.69
TRIM13-206ENST00000457662 PHF8Q9UPP1 1060 aa25.6■■□□□ 1.69
TRIM13-206ENST00000457662 PRR36Q9H6K5 1346 aa25.6■■□□□ 1.69
TRIM13-206ENST00000457662 CCDC61Q9Y6R9 512 aa25.59■■□□□ 1.69
TRIM13-206ENST00000457662 TESK2Q96S53 571 aa25.58■■□□□ 1.69
TRIM13-206ENST00000457662 CABP2Q9NPB3 220 aa25.58■■□□□ 1.69
TRIM13-206ENST00000457662 RGPD8O14715 1765 aaPredicted RBP25.58■■□□□ 1.68
TRIM13-206ENST00000457662 FOXO3O43524 673 aa25.57■■□□□ 1.68
TRIM13-206ENST00000457662 AHDC1Q5TGY3 1603 aaPredicted RBP25.57■■□□□ 1.68
TRIM13-206ENST00000457662 NPHP3Q7Z494 1330 aa25.57■■□□□ 1.68
TRIM13-206ENST00000457662 USP32Q8NFA0 1604 aa25.56■■□□□ 1.68
TRIM13-206ENST00000457662 EIF4G2P78344 907 aaKnown RBP eCLIP25.56■■□□□ 1.68
TRIM13-206ENST00000457662 DDX17Q92841 729 aaKnown RBP25.56■■□□□ 1.68
TRIM13-206ENST00000457662 PHLPP1O60346 1717 aa25.54■■□□□ 1.68
TRIM13-206ENST00000457662 PMFBP1Q8TBY8 1022 aa25.54■■□□□ 1.68
TRIM13-206ENST00000457662 ATP7BP35670 1465 aa25.54■■□□□ 1.68
TRIM13-206ENST00000457662 NHSL1Q5SYE7 1610 aa25.53■■□□□ 1.68
TRIM13-206ENST00000457662 KIF1AQ12756 1690 aa25.52■■□□□ 1.68
TRIM13-206ENST00000457662 SOS2Q07890 1332 aaPredicted RBP25.52■■□□□ 1.68
TRIM13-206ENST00000457662 LRRC59Q96AG4 307 aaKnown RBP25.52■■□□□ 1.68
TRIM13-206ENST00000457662 PUS7Q96PZ0 661 aaKnown RBP25.52■■□□□ 1.68
TRIM13-206ENST00000457662 PLEKHG3A1L390 1219 aa25.51■■□□□ 1.67
TRIM13-206ENST00000457662 TMF1P82094 1093 aa25.5■■□□□ 1.67
TRIM13-206ENST00000457662 PSME1Q06323 249 aa25.5■■□□□ 1.67
TRIM13-206ENST00000457662 NGDNQ8NEJ9 315 aaKnown RBP25.5■■□□□ 1.67
TRIM13-206ENST00000457662 KRT28Q7Z3Y7 464 aa25.49■■□□□ 1.67
TRIM13-206ENST00000457662 ITSN1Q15811 1721 aa25.49■■□□□ 1.67
TRIM13-206ENST00000457662 HSPA5P11021 654 aaKnown RBP25.48■■□□□ 1.67
TRIM13-206ENST00000457662 COL16A1Q07092 1604 aaPredicted RBP25.48■■□□□ 1.67
TRIM13-206ENST00000457662 ATAD2Q6PL18 1390 aa25.48■■□□□ 1.67
TRIM13-206ENST00000457662 XPCQ01831 940 aaPredicted RBP25.47■■□□□ 1.67
TRIM13-206ENST00000457662 CABP1Q9NZU7 370 aa25.47■■□□□ 1.67
TRIM13-206ENST00000457662 PPIP5K1Q6PFW1 1433 aa25.46■■□□□ 1.67
TRIM13-206ENST00000457662 JCADQ9P266 1359 aa25.46■■□□□ 1.67
TRIM13-206ENST00000457662 CDCA8Q53HL2 280 aa25.46■■□□□ 1.67
TRIM13-206ENST00000457662 ACEP12821 1306 aa25.44■■□□□ 1.66
TRIM13-206ENST00000457662 PXDNQ92626 1479 aa25.44■■□□□ 1.66
TRIM13-206ENST00000457662 TOPAZ1Q8N9V7 1692 aa25.43■■□□□ 1.66
TRIM13-206ENST00000457662 ZEB1P37275 1124 aaPredicted RBP25.43■■□□□ 1.66
TRIM13-206ENST00000457662 POLR3AO14802 1390 aaPredicted RBP25.42■■□□□ 1.66
TRIM13-206ENST00000457662 DISP3Q9P2K9 1392 aa25.4■■□□□ 1.66
TRIM13-206ENST00000457662 SBNO1A3KN83 1393 aa25.39■■□□□ 1.66
TRIM13-206ENST00000457662 TMC1Q8TDI8 760 aa25.39■■□□□ 1.65
TRIM13-206ENST00000457662 ZNF692Q9BU19 519 aaPredicted RBP25.39■■□□□ 1.65
TRIM13-206ENST00000457662 SPATA31A3Q5VYP0 1347 aa25.39■■□□□ 1.65
TRIM13-206ENST00000457662 SLC12A5Q9H2X9 1139 aa25.36■■□□□ 1.65
TRIM13-206ENST00000457662 SPATA31A6Q5VVP1 1343 aa25.36■■□□□ 1.65
TRIM13-206ENST00000457662 PNPLA6Q8IY17 1366 aa25.35■■□□□ 1.65
TRIM13-206ENST00000457662 NINLQ9Y2I6 1382 aa25.34■■□□□ 1.65
TRIM13-206ENST00000457662 PAK3O75914 559 aaPredicted RBP25.34■■□□□ 1.65
TRIM13-206ENST00000457662 SHPRHQ149N8 1683 aa25.34■■□□□ 1.65
TRIM13-206ENST00000457662 BRD4O60885 1362 aaPredicted RBP25.34■■□□□ 1.65
TRIM13-206ENST00000457662 TNS3Q68CZ2 1445 aa25.33■■□□□ 1.65
TRIM13-206ENST00000457662 LMOD2Q6P5Q4 547 aa25.33■■□□□ 1.65
TRIM13-206ENST00000457662 TERF2IPQ9NYB0 399 aa25.33■■□□□ 1.65
TRIM13-206ENST00000457662 ARHGEF10O15013 1369 aa25.31■■□□□ 1.64
TRIM13-206ENST00000457662 HDGFL2Q7Z4V5 671 aaPredicted RBP25.31■■□□□ 1.64
TRIM13-206ENST00000457662 CPSF1Q10570 1443 aaKnown RBP25.31■■□□□ 1.64
TRIM13-206ENST00000457662 USP6P35125 1406 aa25.29■■□□□ 1.64
TRIM13-206ENST00000457662 TRPM3Q9HCF6 1732 aaPredicted RBP25.29■■□□□ 1.64
TRIM13-206ENST00000457662 KTN1Q86UP2 1357 aaKnown RBP25.28■■□□□ 1.64
TRIM13-206ENST00000457662 NUTM2BA6NNL0 878 aaPredicted RBP25.28■■□□□ 1.64
TRIM13-206ENST00000457662 NUTM2EB1AL46 878 aaPredicted RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms