RNA–Protein interactions for RNA: ENST00000457279.5

LSP1-212, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 5

Gene LSP1, Length 887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-212ENST00000457279 NBPF1Q3BBV0 1214 aa23.8■■□□□ 1.4
LSP1-212ENST00000457279 SCAF1Q9H7N4 1312 aaKnown RBP23.8■■□□□ 1.4
LSP1-212ENST00000457279 TIMELESSQ9UNS1 1208 aa23.79■■□□□ 1.4
LSP1-212ENST00000457279 ARHGEF28Q8N1W1 1705 aaKnown RBP23.79■■□□□ 1.4
LSP1-212ENST00000457279 PRAM1Q96QH2 718 aa23.78■■□□□ 1.4
LSP1-212ENST00000457279 HSPA1LP34931 641 aa23.77■■□□□ 1.4
LSP1-212ENST00000457279 NBPF8Q3BBV2 869 aa23.77■■□□□ 1.4
LSP1-212ENST00000457279 TRAK1Q9UPV9 953 aa23.77■■□□□ 1.4
LSP1-212ENST00000457279 ADGRB2O60241 1585 aa23.76■■□□□ 1.39
LSP1-212ENST00000457279 GPRASP1Q5JY77 1395 aa23.76■■□□□ 1.39
LSP1-212ENST00000457279 C1orf167Q5SNV9 1468 aa23.75■■□□□ 1.39
LSP1-212ENST00000457279 BRINP3Q76B58 766 aa23.73■■□□□ 1.39
LSP1-212ENST00000457279 POGKQ9P215 609 aa23.73■■□□□ 1.39
LSP1-212ENST00000457279 FMN2Q9NZ56 1722 aa23.73■■□□□ 1.39
LSP1-212ENST00000457279 AHDC1Q5TGY3 1603 aaPredicted RBP23.72■■□□□ 1.39
LSP1-212ENST00000457279 RALGAPBQ86X10 1494 aa23.71■■□□□ 1.39
LSP1-212ENST00000457279 CCER1Q8TC90 406 aaPredicted RBP23.7■■□□□ 1.38
LSP1-212ENST00000457279 ROCK2O75116 1388 aaKnown RBP23.68■■□□□ 1.38
LSP1-212ENST00000457279 NHSL1Q5SYE7 1610 aa23.67■■□□□ 1.38
LSP1-212ENST00000457279 SAFB2Q14151 953 aaKnown RBP eCLIP23.67■■□□□ 1.38
LSP1-212ENST00000457279 COL16A1Q07092 1604 aaPredicted RBP23.66■■□□□ 1.38
LSP1-212ENST00000457279 PHLPP1O60346 1717 aa23.64■■□□□ 1.38
LSP1-212ENST00000457279 ANKARQ7Z5J8 1434 aa23.64■■□□□ 1.37
LSP1-212ENST00000457279 ORAI2Q96SN7 254 aa23.63■■□□□ 1.37
LSP1-212ENST00000457279 MINK1Q8N4C8 1332 aaPredicted RBP23.62■■□□□ 1.37
LSP1-212ENST00000457279 CENPJQ9HC77 1338 aaPredicted RBP23.62■■□□□ 1.37
LSP1-212ENST00000457279 WASLO00401 505 aaPredicted RBP23.62■■□□□ 1.37
LSP1-212ENST00000457279 USP32Q8NFA0 1604 aa23.61■■□□□ 1.37
LSP1-212ENST00000457279 EIF3AQ14152 1382 aaKnown RBP23.61■■□□□ 1.37
LSP1-212ENST00000457279 TULP4Q9NRJ4 1543 aa23.59■■□□□ 1.37
LSP1-212ENST00000457279 HIRIP3Q9BW71 556 aaPredicted RBP23.59■■□□□ 1.37
LSP1-212ENST00000457279 ESCO1Q5FWF5 840 aa23.58■■□□□ 1.37
LSP1-212ENST00000457279 CARD11Q9BXL7 1154 aa23.58■■□□□ 1.37
LSP1-212ENST00000457279 RGPD8O14715 1765 aaPredicted RBP23.57■■□□□ 1.36
LSP1-212ENST00000457279 KIF1AQ12756 1690 aa23.57■■□□□ 1.36
LSP1-212ENST00000457279 QRICH2Q9H0J4 1663 aa23.57■■□□□ 1.36
LSP1-212ENST00000457279 SOS2Q07890 1332 aaPredicted RBP23.57■■□□□ 1.36
LSP1-212ENST00000457279 PRR36Q9H6K5 1346 aa23.56■■□□□ 1.36
LSP1-212ENST00000457279 SBNO2Q9Y2G9 1366 aa23.55■■□□□ 1.36
LSP1-212ENST00000457279 NUTM2FA1L443 756 aa23.55■■□□□ 1.36
LSP1-212ENST00000457279 JCADQ9P266 1359 aa23.54■■□□□ 1.36
LSP1-212ENST00000457279 ATP7BP35670 1465 aa23.54■■□□□ 1.36
LSP1-212ENST00000457279 NPHP3Q7Z494 1330 aa23.53■■□□□ 1.36
LSP1-212ENST00000457279 SHPRHQ149N8 1683 aa23.52■■□□□ 1.36
LSP1-212ENST00000457279 PXDNQ92626 1479 aa23.52■■□□□ 1.36
LSP1-212ENST00000457279 CDK19Q9BWU1 502 aa23.52■■□□□ 1.36
LSP1-212ENST00000457279 PHF8Q9UPP1 1060 aa23.52■■□□□ 1.36
LSP1-212ENST00000457279 DDX17Q92841 729 aaKnown RBP23.51■■□□□ 1.35
LSP1-212ENST00000457279 LRRC59Q96AG4 307 aaKnown RBP23.51■■□□□ 1.35
LSP1-212ENST00000457279 TOPAZ1Q8N9V7 1692 aa23.49■■□□□ 1.35
LSP1-212ENST00000457279 FOXO3O43524 673 aa23.49■■□□□ 1.35
LSP1-212ENST00000457279 NUDT16Q96DE0 195 aaKnown RBP23.49■■□□□ 1.35
LSP1-212ENST00000457279 ITSN1Q15811 1721 aa23.49■■□□□ 1.35
LSP1-212ENST00000457279 MED1Q15648 1581 aaPredicted RBP23.46■■□□□ 1.35
LSP1-212ENST00000457279 SPATA31A6Q5VVP1 1343 aa23.45■■□□□ 1.34
LSP1-212ENST00000457279 EVC2Q86UK5 1308 aa23.45■■□□□ 1.34
LSP1-212ENST00000457279 CCDC61Q9Y6R9 512 aa23.45■■□□□ 1.34
LSP1-212ENST00000457279 PNPLA6Q8IY17 1366 aa23.44■■□□□ 1.34
LSP1-212ENST00000457279 PLEKHG3A1L390 1219 aa23.44■■□□□ 1.34
LSP1-212ENST00000457279 POLR3AO14802 1390 aaPredicted RBP23.42■■□□□ 1.34
LSP1-212ENST00000457279 TESK2Q96S53 571 aa23.42■■□□□ 1.34
LSP1-212ENST00000457279 SBNO1A3KN83 1393 aa23.41■■□□□ 1.34
LSP1-212ENST00000457279 COL22A1Q8NFW1 1626 aaPredicted RBP23.41■■□□□ 1.34
LSP1-212ENST00000457279 SRPK2P78362 688 aaKnown RBP23.41■■□□□ 1.34
LSP1-212ENST00000457279 KRT28Q7Z3Y7 464 aa23.41■■□□□ 1.34
LSP1-212ENST00000457279 PMFBP1Q8TBY8 1022 aa23.41■■□□□ 1.34
LSP1-212ENST00000457279 USP47Q96K76 1375 aa23.4■■□□□ 1.34
LSP1-212ENST00000457279 ST20-MTHFSA0A0A6YYL1 179 aa23.4■■□□□ 1.34
LSP1-212ENST00000457279 SLC24A1O60721 1099 aa23.4■■□□□ 1.34
LSP1-212ENST00000457279 CABP2Q9NPB3 220 aa23.4■■□□□ 1.34
LSP1-212ENST00000457279 SPATA31A3Q5VYP0 1347 aa23.39■■□□□ 1.34
LSP1-212ENST00000457279 PSME1Q06323 249 aa23.39■■□□□ 1.33
LSP1-212ENST00000457279 PUS7Q96PZ0 661 aaKnown RBP23.39■■□□□ 1.33
LSP1-212ENST00000457279 TRPM3Q9HCF6 1732 aaPredicted RBP23.39■■□□□ 1.33
LSP1-212ENST00000457279 XPCQ01831 940 aaPredicted RBP23.38■■□□□ 1.33
LSP1-212ENST00000457279 LRP6O75581 1613 aa23.37■■□□□ 1.33
LSP1-212ENST00000457279 TNS3Q68CZ2 1445 aa23.36■■□□□ 1.33
LSP1-212ENST00000457279 PPIP5K1Q6PFW1 1433 aa23.36■■□□□ 1.33
LSP1-212ENST00000457279 NGDNQ8NEJ9 315 aaKnown RBP23.35■■□□□ 1.33
LSP1-212ENST00000457279 ATAD2Q6PL18 1390 aa23.35■■□□□ 1.33
LSP1-212ENST00000457279 ACEP12821 1306 aa23.34■■□□□ 1.33
LSP1-212ENST00000457279 ALS2Q96Q42 1657 aa23.33■■□□□ 1.33
LSP1-212ENST00000457279 BRD4O60885 1362 aaPredicted RBP23.32■■□□□ 1.32
LSP1-212ENST00000457279 ARHGEF10O15013 1369 aa23.31■■□□□ 1.32
LSP1-212ENST00000457279 CABP1Q9NZU7 370 aa23.31■■□□□ 1.32
LSP1-212ENST00000457279 DISP3Q9P2K9 1392 aa23.3■■□□□ 1.32
LSP1-212ENST00000457279 CPSF1Q10570 1443 aaKnown RBP23.27■■□□□ 1.32
LSP1-212ENST00000457279 SSH2Q76I76 1423 aa23.26■■□□□ 1.31
LSP1-212ENST00000457279 AKAP12Q02952 1782 aa23.26■■□□□ 1.31
LSP1-212ENST00000457279 USP6P35125 1406 aa23.25■■□□□ 1.31
LSP1-212ENST00000457279 ZNF692Q9BU19 519 aaPredicted RBP23.25■■□□□ 1.31
LSP1-212ENST00000457279 NUTM2BA6NNL0 878 aaPredicted RBP23.24■■□□□ 1.31
LSP1-212ENST00000457279 NUTM2EB1AL46 878 aaPredicted RBP23.24■■□□□ 1.31
LSP1-212ENST00000457279 EIF4G2P78344 907 aaKnown RBP eCLIP23.24■■□□□ 1.31
LSP1-212ENST00000457279 TMF1P82094 1093 aa23.24■■□□□ 1.31
LSP1-212ENST00000457279 NUTM2AQ8IVF1 878 aaPredicted RBP23.24■■□□□ 1.31
LSP1-212ENST00000457279 RGS17Q9UGC6 210 aaPredicted RBP23.24■■□□□ 1.31
LSP1-212ENST00000457279 NINLQ9Y2I6 1382 aa23.24■■□□□ 1.31
LSP1-212ENST00000457279 CD163L1Q9NR16 1453 aa23.24■■□□□ 1.31
LSP1-212ENST00000457279 ABCA3Q99758 1704 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms