RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 AFF2P51816 1311 aa22.64■■□□□ 1.22
CROCCP4-201ENST00000457096 XPCQ01831 940 aaPredicted RBP22.63■■□□□ 1.21
CROCCP4-201ENST00000457096 ZNF772Q68DY9 489 aaPredicted RBP22.63■■□□□ 1.21
CROCCP4-201ENST00000457096 C8orf37Q96NL8 207 aa22.63■■□□□ 1.21
CROCCP4-201ENST00000457096 ADAMTS2O95450 1211 aa22.62■■□□□ 1.21
CROCCP4-201ENST00000457096 ESCO1Q5FWF5 840 aa22.62■■□□□ 1.21
CROCCP4-201ENST00000457096 CFAP70Q5T0N1 1121 aa22.62■■□□□ 1.21
CROCCP4-201ENST00000457096 SOS2Q07890 1332 aaPredicted RBP22.61■■□□□ 1.21
CROCCP4-201ENST00000457096 TECPR2O15040 1411 aa22.61■■□□□ 1.21
CROCCP4-201ENST00000457096 CDC42BPGQ6DT37 1551 aa22.6■■□□□ 1.21
CROCCP4-201ENST00000457096 YTHDC2Q9H6S0 1430 aaKnown RBP22.6■■□□□ 1.21
CROCCP4-201ENST00000457096 ABCC11Q96J66 1382 aa22.6■■□□□ 1.21
CROCCP4-201ENST00000457096 LAMC1P11047 1609 aa22.6■■□□□ 1.21
CROCCP4-201ENST00000457096 FOXO3O43524 673 aa22.57■■□□□ 1.2
CROCCP4-201ENST00000457096 C14orf93Q9H972 538 aaKnown RBP22.57■■□□□ 1.2
CROCCP4-201ENST00000457096 KNDC1Q76NI1 1749 aa22.57■■□□□ 1.2
CROCCP4-201ENST00000457096 NRXN1Q9ULB1 1477 aa22.56■■□□□ 1.2
CROCCP4-201ENST00000457096 RXRBP28702 533 aa22.56■■□□□ 1.2
CROCCP4-201ENST00000457096 SAFB2Q14151 953 aaKnown RBP eCLIP22.56■■□□□ 1.2
CROCCP4-201ENST00000457096 MYOM2P54296 1465 aa22.54■■□□□ 1.2
CROCCP4-201ENST00000457096 KDM2AQ9Y2K7 1162 aa22.53■■□□□ 1.2
CROCCP4-201ENST00000457096 PXDNQ92626 1479 aa22.53■■□□□ 1.2
CROCCP4-201ENST00000457096 NGLY1Q96IV0 654 aa22.52■■□□□ 1.2
CROCCP4-201ENST00000457096 QTRT2Q9H974 415 aaKnown RBP22.52■■□□□ 1.2
CROCCP4-201ENST00000457096 PRAM1Q96QH2 718 aa22.51■■□□□ 1.19
CROCCP4-201ENST00000457096 NPHP3Q7Z494 1330 aa22.51■■□□□ 1.19
CROCCP4-201ENST00000457096 FMN2Q9NZ56 1722 aa22.5■■□□□ 1.19
CROCCP4-201ENST00000457096 ACIN1Q9UKV3 1341 aaKnown RBP22.49■■□□□ 1.19
CROCCP4-201ENST00000457096 DHX57Q6P158 1386 aaKnown RBP22.49■■□□□ 1.19
CROCCP4-201ENST00000457096 DCAF11Q8TEB1 546 aa22.47■■□□□ 1.19
CROCCP4-201ENST00000457096 UPF1Q92900 1129 aaKnown RBP eCLIP22.47■■□□□ 1.19
CROCCP4-201ENST00000457096 RGS12O14924 1447 aa22.47■■□□□ 1.19
CROCCP4-201ENST00000457096 COL22A1Q8NFW1 1626 aaPredicted RBP22.46■■□□□ 1.19
CROCCP4-201ENST00000457096 PLEKHG5O94827 1062 aa22.46■■□□□ 1.19
CROCCP4-201ENST00000457096 TRAK1Q9UPV9 953 aa22.45■■□□□ 1.18
CROCCP4-201ENST00000457096 ADGRB1O14514 1584 aa22.44■■□□□ 1.18
CROCCP4-201ENST00000457096 RGPD8O14715 1765 aaPredicted RBP22.44■■□□□ 1.18
CROCCP4-201ENST00000457096 SIRT1Q96EB6 747 aa22.44■■□□□ 1.18
CROCCP4-201ENST00000457096 HIRIP3Q9BW71 556 aaPredicted RBP22.44■■□□□ 1.18
CROCCP4-201ENST00000457096 USP21Q9UK80 565 aa22.44■■□□□ 1.18
CROCCP4-201ENST00000457096 RBM6P78332 1123 aaKnown RBP22.43■■□□□ 1.18
CROCCP4-201ENST00000457096 POGKQ9P215 609 aa22.43■■□□□ 1.18
CROCCP4-201ENST00000457096 CDK12Q9NYV4 1490 aaPredicted RBP22.42■■□□□ 1.18
CROCCP4-201ENST00000457096 KRT28Q7Z3Y7 464 aa22.42■■□□□ 1.18
CROCCP4-201ENST00000457096 SPATA31A3Q5VYP0 1347 aa22.4■■□□□ 1.18
CROCCP4-201ENST00000457096 FNBP4Q8N3X1 1017 aaPredicted RBP22.4■■□□□ 1.18
CROCCP4-201ENST00000457096 PHF8Q9UPP1 1060 aa22.4■■□□□ 1.18
CROCCP4-201ENST00000457096 MINK1Q8N4C8 1332 aaPredicted RBP22.39■■□□□ 1.18
CROCCP4-201ENST00000457096 PMFBP1Q8TBY8 1022 aa22.39■■□□□ 1.17
CROCCP4-201ENST00000457096 DLC1Q96QB1 1528 aa22.38■■□□□ 1.17
CROCCP4-201ENST00000457096 CABLES1Q8TDN4 633 aa22.38■■□□□ 1.17
CROCCP4-201ENST00000457096 KIF1AQ12756 1690 aa22.38■■□□□ 1.17
CROCCP4-201ENST00000457096 USP32Q8NFA0 1604 aa22.38■■□□□ 1.17
CROCCP4-201ENST00000457096 HRCP23327 699 aa22.37■■□□□ 1.17
CROCCP4-201ENST00000457096 ATRNO75882 1429 aa22.36■■□□□ 1.17
CROCCP4-201ENST00000457096 BCL9LQ86UU0 1499 aa22.35■■□□□ 1.17
CROCCP4-201ENST00000457096 TRPC5Q9UL62 973 aaPredicted RBP22.35■■□□□ 1.17
CROCCP4-201ENST00000457096 PRR36Q9H6K5 1346 aa22.34■■□□□ 1.17
CROCCP4-201ENST00000457096 LMOD2Q6P5Q4 547 aa22.34■■□□□ 1.17
CROCCP4-201ENST00000457096 MARF1Q9Y4F3 1742 aaKnown RBP22.33■■□□□ 1.17
CROCCP4-201ENST00000457096 TNS3Q68CZ2 1445 aa22.32■■□□□ 1.16
CROCCP4-201ENST00000457096 ADGRB2O60241 1585 aa22.32■■□□□ 1.16
CROCCP4-201ENST00000457096 PSME1Q06323 249 aa22.31■■□□□ 1.16
CROCCP4-201ENST00000457096 HAP1P54257 671 aaPredicted RBP22.28■■□□□ 1.16
CROCCP4-201ENST00000457096 ANKARQ7Z5J8 1434 aa22.28■■□□□ 1.16
CROCCP4-201ENST00000457096 WASLO00401 505 aaPredicted RBP22.27■■□□□ 1.16
CROCCP4-201ENST00000457096 SLIT2O94813 1529 aa22.26■■□□□ 1.15
CROCCP4-201ENST00000457096 GJD4Q96KN9 370 aaPredicted RBP22.26■■□□□ 1.15
CROCCP4-201ENST00000457096 ARHGEF28Q8N1W1 1705 aaKnown RBP22.26■■□□□ 1.15
CROCCP4-201ENST00000457096 SBNO1A3KN83 1393 aa22.25■■□□□ 1.15
CROCCP4-201ENST00000457096 NBPF1Q3BBV0 1214 aa22.25■■□□□ 1.15
CROCCP4-201ENST00000457096 UNC5CLQ8IV45 518 aa22.25■■□□□ 1.15
CROCCP4-201ENST00000457096 TULP4Q9NRJ4 1543 aa22.25■■□□□ 1.15
CROCCP4-201ENST00000457096 ABCA3Q99758 1704 aa22.23■■□□□ 1.15
CROCCP4-201ENST00000457096 GLI3P10071 1580 aa22.23■■□□□ 1.15
CROCCP4-201ENST00000457096 TRPM3Q9HCF6 1732 aaPredicted RBP22.23■■□□□ 1.15
CROCCP4-201ENST00000457096 RALGAPBQ86X10 1494 aa22.22■■□□□ 1.15
CROCCP4-201ENST00000457096 STAC3Q96MF2 364 aa22.22■■□□□ 1.15
CROCCP4-201ENST00000457096 ATAD2Q6PL18 1390 aa22.21■■□□□ 1.15
CROCCP4-201ENST00000457096 FAM83GA6ND36 823 aa22.2■■□□□ 1.14
CROCCP4-201ENST00000457096 ARHGEF10O15013 1369 aa22.2■■□□□ 1.14
CROCCP4-201ENST00000457096 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.2■■□□□ 1.14
CROCCP4-201ENST00000457096 NGDNQ8NEJ9 315 aaKnown RBP22.19■■□□□ 1.14
CROCCP4-201ENST00000457096 NUDT16Q96DE0 195 aaKnown RBP22.19■■□□□ 1.14
CROCCP4-201ENST00000457096 ATP7BP35670 1465 aa22.19■■□□□ 1.14
CROCCP4-201ENST00000457096 PLCH1Q4KWH8 1693 aa22.19■■□□□ 1.14
CROCCP4-201ENST00000457096 GPRASP1Q5JY77 1395 aa22.18■■□□□ 1.14
CROCCP4-201ENST00000457096 PAK3O75914 559 aaPredicted RBP22.18■■□□□ 1.14
CROCCP4-201ENST00000457096 CDK19Q9BWU1 502 aa22.18■■□□□ 1.14
CROCCP4-201ENST00000457096 EIF3AQ14152 1382 aaKnown RBP22.17■■□□□ 1.14
CROCCP4-201ENST00000457096 SIN3AQ96ST3 1273 aa22.17■■□□□ 1.14
CROCCP4-201ENST00000457096 ALS2Q96Q42 1657 aa22.17■■□□□ 1.14
CROCCP4-201ENST00000457096 CCDC9Q9Y3X0 531 aaKnown RBP22.16■■□□□ 1.14
CROCCP4-201ENST00000457096 EP400Q96L91 3159 aa22.15■■□□□ 1.14
CROCCP4-201ENST00000457096 NUTM2GQ5VZR2 741 aa22.14■■□□□ 1.13
CROCCP4-201ENST00000457096 VPS72Q15906 364 aa22.13■■□□□ 1.13
CROCCP4-201ENST00000457096 L3MBTL2Q969R5 705 aa22.13■■□□□ 1.13
CROCCP4-201ENST00000457096 SEPT12Q8IYM1 358 aa22.12■■□□□ 1.13
CROCCP4-201ENST00000457096 KIAA1210Q9ULL0 1709 aa22.11■■□□□ 1.13
CROCCP4-201ENST00000457096 NEUROD1Q13562 356 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms