RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 STK26Q9P289 416 aa12.26□□□□□ -0.45
SP140-207ENST00000456542 CLSPNQ9HAW4 1339 aa12.26□□□□□ -0.45
SP140-207ENST00000456542 TRPM1Q7Z4N2 1603 aa12.26□□□□□ -0.45
SP140-207ENST00000456542 ARHGEF28Q8N1W1 1705 aaKnown RBP12.25□□□□□ -0.45
SP140-207ENST00000456542 MST1RQ04912 1400 aa12.25□□□□□ -0.45
SP140-207ENST00000456542 TONSLQ96HA7 1378 aa12.24□□□□□ -0.45
SP140-207ENST00000456542 ADGRB2O60241 1585 aa12.23□□□□□ -0.45
SP140-207ENST00000456542 PLEKHH1Q9ULM0 1364 aa12.23□□□□□ -0.45
SP140-207ENST00000456542 HSPA1LP34931 641 aa12.22□□□□□ -0.45
SP140-207ENST00000456542 WAPLQ7Z5K2 1190 aa12.22□□□□□ -0.45
SP140-207ENST00000456542 FMN2Q9NZ56 1722 aa12.22□□□□□ -0.45
SP140-207ENST00000456542 PRAM1Q96QH2 718 aa12.21□□□□□ -0.45
SP140-207ENST00000456542 AHDC1Q5TGY3 1603 aaPredicted RBP12.21□□□□□ -0.46
SP140-207ENST00000456542 C1orf167Q5SNV9 1468 aa12.21□□□□□ -0.46
SP140-207ENST00000456542 PHLPP1O60346 1717 aa12.2□□□□□ -0.46
SP140-207ENST00000456542 NHSL1Q5SYE7 1610 aa12.2□□□□□ -0.46
SP140-207ENST00000456542 TRAK1Q9UPV9 953 aa12.2□□□□□ -0.46
SP140-207ENST00000456542 NBPF1Q3BBV0 1214 aa12.19□□□□□ -0.46
SP140-207ENST00000456542 BRINP3Q76B58 766 aa12.19□□□□□ -0.46
SP140-207ENST00000456542 POGKQ9P215 609 aa12.19□□□□□ -0.46
SP140-207ENST00000456542 COL16A1Q07092 1604 aaPredicted RBP12.19□□□□□ -0.46
SP140-207ENST00000456542 TIMELESSQ9UNS1 1208 aa12.18□□□□□ -0.46
SP140-207ENST00000456542 GPRASP1Q5JY77 1395 aa12.18□□□□□ -0.46
SP140-207ENST00000456542 RALGAPBQ86X10 1494 aa12.17□□□□□ -0.46
SP140-207ENST00000456542 NBPF8Q3BBV2 869 aa12.17□□□□□ -0.46
SP140-207ENST00000456542 ROCK2O75116 1388 aaKnown RBP12.17□□□□□ -0.46
SP140-207ENST00000456542 RGPD8O14715 1765 aaPredicted RBP12.16□□□□□ -0.46
SP140-207ENST00000456542 SAFB2Q14151 953 aaKnown RBP eCLIP12.16□□□□□ -0.46
SP140-207ENST00000456542 KIF1AQ12756 1690 aa12.16□□□□□ -0.46
SP140-207ENST00000456542 ANKARQ7Z5J8 1434 aa12.15□□□□□ -0.46
SP140-207ENST00000456542 CCER1Q8TC90 406 aaPredicted RBP12.15□□□□□ -0.46
SP140-207ENST00000456542 QRICH2Q9H0J4 1663 aa12.15□□□□□ -0.46
SP140-207ENST00000456542 EIF3AQ14152 1382 aaKnown RBP12.15□□□□□ -0.46
SP140-207ENST00000456542 USP32Q8NFA0 1604 aa12.15□□□□□ -0.47
SP140-207ENST00000456542 ILDR2Q71H61 639 aa12.14□□□□□ -0.47
SP140-207ENST00000456542 TULP4Q9NRJ4 1543 aa12.14□□□□□ -0.47
SP140-207ENST00000456542 MINK1Q8N4C8 1332 aaPredicted RBP12.13□□□□□ -0.47
SP140-207ENST00000456542 SHPRHQ149N8 1683 aa12.13□□□□□ -0.47
SP140-207ENST00000456542 ORAI2Q96SN7 254 aa12.13□□□□□ -0.47
SP140-207ENST00000456542 ITSN1Q15811 1721 aa12.13□□□□□ -0.47
SP140-207ENST00000456542 CENPJQ9HC77 1338 aaPredicted RBP12.12□□□□□ -0.47
SP140-207ENST00000456542 ESCO1Q5FWF5 840 aa12.12□□□□□ -0.47
SP140-207ENST00000456542 JCADQ9P266 1359 aa12.12□□□□□ -0.47
SP140-207ENST00000456542 WASLO00401 505 aaPredicted RBP12.11□□□□□ -0.47
SP140-207ENST00000456542 HIRIP3Q9BW71 556 aaPredicted RBP12.11□□□□□ -0.47
SP140-207ENST00000456542 NPHP3Q7Z494 1330 aa12.11□□□□□ -0.47
SP140-207ENST00000456542 MED1Q15648 1581 aaPredicted RBP12.1□□□□□ -0.47
SP140-207ENST00000456542 NUTM2FA1L443 756 aa12.1□□□□□ -0.47
SP140-207ENST00000456542 CARD11Q9BXL7 1154 aa12.1□□□□□ -0.47
SP140-207ENST00000456542 SOS2Q07890 1332 aaPredicted RBP12.1□□□□□ -0.47
SP140-207ENST00000456542 TOPAZ1Q8N9V7 1692 aa12.1□□□□□ -0.47
SP140-207ENST00000456542 ATP7BP35670 1465 aa12.09□□□□□ -0.47
SP140-207ENST00000456542 PXDNQ92626 1479 aa12.09□□□□□ -0.47
SP140-207ENST00000456542 SBNO2Q9Y2G9 1366 aa12.08□□□□□ -0.48
SP140-207ENST00000456542 LRRC59Q96AG4 307 aaKnown RBP12.08□□□□□ -0.48
SP140-207ENST00000456542 PRR36Q9H6K5 1346 aa12.08□□□□□ -0.48
SP140-207ENST00000456542 DDX17Q92841 729 aaKnown RBP12.07□□□□□ -0.48
SP140-207ENST00000456542 PHF8Q9UPP1 1060 aa12.07□□□□□ -0.48
SP140-207ENST00000456542 SPATA31A6Q5VVP1 1343 aa12.07□□□□□ -0.48
SP140-207ENST00000456542 FOXO3O43524 673 aa12.06□□□□□ -0.48
SP140-207ENST00000456542 CDK19Q9BWU1 502 aa12.06□□□□□ -0.48
SP140-207ENST00000456542 COL22A1Q8NFW1 1626 aaPredicted RBP12.06□□□□□ -0.48
SP140-207ENST00000456542 PNPLA6Q8IY17 1366 aa12.05□□□□□ -0.48
SP140-207ENST00000456542 NUDT16Q96DE0 195 aaKnown RBP12.05□□□□□ -0.48
SP140-207ENST00000456542 DISP3Q9P2K9 1392 aa12.05□□□□□ -0.48
SP140-207ENST00000456542 TRPM3Q9HCF6 1732 aaPredicted RBP12.04□□□□□ -0.48
SP140-207ENST00000456542 EVC2Q86UK5 1308 aa12.04□□□□□ -0.48
SP140-207ENST00000456542 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
SP140-207ENST00000456542 CCDC61Q9Y6R9 512 aa12.03□□□□□ -0.48
SP140-207ENST00000456542 SBNO1A3KN83 1393 aa12.03□□□□□ -0.48
SP140-207ENST00000456542 LRP6O75581 1613 aa12.02□□□□□ -0.49
SP140-207ENST00000456542 PSME1Q06323 249 aa12.02□□□□□ -0.49
SP140-207ENST00000456542 KRT28Q7Z3Y7 464 aa12.02□□□□□ -0.49
SP140-207ENST00000456542 PMFBP1Q8TBY8 1022 aa12.02□□□□□ -0.49
SP140-207ENST00000456542 POLR3AO14802 1390 aaPredicted RBP12.02□□□□□ -0.49
SP140-207ENST00000456542 USP47Q96K76 1375 aa12.02□□□□□ -0.49
SP140-207ENST00000456542 TNS3Q68CZ2 1445 aa12.02□□□□□ -0.49
SP140-207ENST00000456542 ALS2Q96Q42 1657 aa12.01□□□□□ -0.49
SP140-207ENST00000456542 PLEKHG3A1L390 1219 aa12.01□□□□□ -0.49
SP140-207ENST00000456542 SLC24A1O60721 1099 aa12.01□□□□□ -0.49
SP140-207ENST00000456542 XPCQ01831 940 aaPredicted RBP12.01□□□□□ -0.49
SP140-207ENST00000456542 SPATA31A3Q5VYP0 1347 aa12.01□□□□□ -0.49
SP140-207ENST00000456542 PPIP5K1Q6PFW1 1433 aa12.01□□□□□ -0.49
SP140-207ENST00000456542 NGDNQ8NEJ9 315 aaKnown RBP12□□□□□ -0.49
SP140-207ENST00000456542 CABP2Q9NPB3 220 aa12□□□□□ -0.49
SP140-207ENST00000456542 ATAD2Q6PL18 1390 aa12□□□□□ -0.49
SP140-207ENST00000456542 ST20-MTHFSA0A0A6YYL1 179 aa11.99□□□□□ -0.49
SP140-207ENST00000456542 TESK2Q96S53 571 aa11.99□□□□□ -0.49
SP140-207ENST00000456542 ARHGEF10O15013 1369 aa11.99□□□□□ -0.49
SP140-207ENST00000456542 MARF1Q9Y4F3 1742 aaKnown RBP11.99□□□□□ -0.49
SP140-207ENST00000456542 AKAP12Q02952 1782 aa11.98□□□□□ -0.49
SP140-207ENST00000456542 ABCA3Q99758 1704 aa11.98□□□□□ -0.49
SP140-207ENST00000456542 BRD4O60885 1362 aaPredicted RBP11.98□□□□□ -0.49
SP140-207ENST00000456542 ACEP12821 1306 aa11.98□□□□□ -0.49
SP140-207ENST00000456542 PUS7Q96PZ0 661 aaKnown RBP11.98□□□□□ -0.49
SP140-207ENST00000456542 CRYBG1Q9Y4K1 1723 aa11.97□□□□□ -0.49
SP140-207ENST00000456542 NUTM2BA6NNL0 878 aaPredicted RBP11.96□□□□□ -0.49
SP140-207ENST00000456542 NUTM2EB1AL46 878 aaPredicted RBP11.96□□□□□ -0.49
SP140-207ENST00000456542 NUTM2AQ8IVF1 878 aaPredicted RBP11.96□□□□□ -0.49
SP140-207ENST00000456542 MON2Q7Z3U7 1717 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms