RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 UGGT1Q9NYU2 1555 aa13.62□□□□□ -0.23
PTCHD1-202ENST00000456522 KCNV2Q8TDN2 545 aa13.61□□□□□ -0.23
PTCHD1-202ENST00000456522 MS4A3Q96HJ5 214 aa13.61□□□□□ -0.23
PTCHD1-202ENST00000456522 MS4A4AQ96JQ5 239 aa13.61□□□□□ -0.23
PTCHD1-202ENST00000456522 SPATA31D1Q6ZQQ2 1576 aa13.61□□□□□ -0.23
PTCHD1-202ENST00000456522 PTPRMP28827 1452 aa13.61□□□□□ -0.23
PTCHD1-202ENST00000456522 CLTCL1P53675 1640 aa13.61□□□□□ -0.23
PTCHD1-202ENST00000456522 TNRQ92752 1358 aa13.6□□□□□ -0.23
PTCHD1-202ENST00000456522 WDR70Q9NW82 654 aa13.6□□□□□ -0.23
PTCHD1-202ENST00000456522 KIF1BO60333 1816 aa13.58□□□□□ -0.24
PTCHD1-202ENST00000456522 TMEM106CQ9BVX2 250 aa13.58□□□□□ -0.24
PTCHD1-202ENST00000456522 TIE1P35590 1138 aa13.57□□□□□ -0.24
PTCHD1-202ENST00000456522 IDI1Q13907 227 aa13.57□□□□□ -0.24
PTCHD1-202ENST00000456522 ILDR1Q86SU0 546 aaPredicted RBP13.57□□□□□ -0.24
PTCHD1-202ENST00000456522 SLC52A1Q9NWF4 448 aa13.57□□□□□ -0.24
PTCHD1-202ENST00000456522 TRPC6Q9Y210 931 aa13.57□□□□□ -0.24
PTCHD1-202ENST00000456522 RGL3Q3MIN7 710 aa13.56□□□□□ -0.24
PTCHD1-202ENST00000456522 PIK3C2BO00750 1634 aa13.56□□□□□ -0.24
PTCHD1-202ENST00000456522 MYO5BQ9ULV0 1848 aa13.55□□□□□ -0.24
PTCHD1-202ENST00000456522 SETD1BQ9UPS6 1966 aaKnown RBP13.54□□□□□ -0.24
PTCHD1-202ENST00000456522 TONSLQ96HA7 1378 aa13.54□□□□□ -0.24
PTCHD1-202ENST00000456522 ZNF326Q5BKZ1 582 aaKnown RBP13.53□□□□□ -0.24
PTCHD1-202ENST00000456522 MYO3AQ8NEV4 1616 aa13.52□□□□□ -0.25
PTCHD1-202ENST00000456522 TMEM131LA2VDJ0 1609 aa13.51□□□□□ -0.25
PTCHD1-202ENST00000456522 NLRP1Q9C000 1473 aa13.51□□□□□ -0.25
PTCHD1-202ENST00000456522 SPATA31E1Q6ZUB1 1445 aa13.51□□□□□ -0.25
PTCHD1-202ENST00000456522 NCKAP5LQ9HCH0 1330 aa13.51□□□□□ -0.25
PTCHD1-202ENST00000456522 L3MBTL2Q969R5 705 aa13.51□□□□□ -0.25
PTCHD1-202ENST00000456522 ADGRB3O60242 1522 aa13.5□□□□□ -0.25
PTCHD1-202ENST00000456522 CLCN6P51797 869 aa13.5□□□□□ -0.25
PTCHD1-202ENST00000456522 GOLGA2Q08379 1002 aa13.5□□□□□ -0.25
PTCHD1-202ENST00000456522 MFSD10Q14728 455 aa13.5□□□□□ -0.25
PTCHD1-202ENST00000456522 ARHGEF1Q92888 912 aaKnown RBP13.5□□□□□ -0.25
PTCHD1-202ENST00000456522 TTLL13PA6NNM8 815 aa13.49□□□□□ -0.25
PTCHD1-202ENST00000456522 ZEB1P37275 1124 aaPredicted RBP13.49□□□□□ -0.25
PTCHD1-202ENST00000456522 UBR1Q8IWV7 1749 aa13.49□□□□□ -0.25
PTCHD1-202ENST00000456522 A2ML1A8K2U0 1454 aa13.48□□□□□ -0.25
PTCHD1-202ENST00000456522 DCAF11Q8TEB1 546 aa13.48□□□□□ -0.25
PTCHD1-202ENST00000456522 CRISPLD2Q9H0B8 497 aa13.48□□□□□ -0.25
PTCHD1-202ENST00000456522 CEP170BQ9Y4F5 1589 aaPredicted RBP13.48□□□□□ -0.25
PTCHD1-202ENST00000456522 UHRF1BP1Q6BDS2 1440 aa13.47□□□□□ -0.25
PTCHD1-202ENST00000456522 MKRN3Q13064 507 aaKnown RBP13.47□□□□□ -0.25
PTCHD1-202ENST00000456522 E2F4Q16254 413 aa13.47□□□□□ -0.25
PTCHD1-202ENST00000456522 NUTM2DQ5VT03 806 aaPredicted RBP13.47□□□□□ -0.25
PTCHD1-202ENST00000456522 TIMELESSQ9UNS1 1208 aa13.47□□□□□ -0.25
PTCHD1-202ENST00000456522 NEURL4Q96JN8 1562 aa13.46□□□□□ -0.25
PTCHD1-202ENST00000456522 ZNF142P52746 1687 aaPredicted RBP13.46□□□□□ -0.26
PTCHD1-202ENST00000456522 KDM5AP29375 1690 aaKnown RBP13.45□□□□□ -0.26
PTCHD1-202ENST00000456522 THEMISQ8N1K5 641 aaPredicted RBP13.45□□□□□ -0.26
PTCHD1-202ENST00000456522 BMP2KQ9NSY1 1161 aaPredicted RBP13.45□□□□□ -0.26
PTCHD1-202ENST00000456522 PPLO60437 1756 aa13.45□□□□□ -0.26
PTCHD1-202ENST00000456522 PDE4AP27815 886 aa13.44□□□□□ -0.26
PTCHD1-202ENST00000456522 RIMS2Q9UQ26 1411 aa13.44□□□□□ -0.26
PTCHD1-202ENST00000456522 IFT172Q9UG01 1749 aa13.44□□□□□ -0.26
PTCHD1-202ENST00000456522 RPGRIP1LQ68CZ1 1315 aa13.43□□□□□ -0.26
PTCHD1-202ENST00000456522 PPP1R15AO75807 674 aaPredicted RBP13.43□□□□□ -0.26
PTCHD1-202ENST00000456522 ARIH1Q9Y4X5 557 aaPredicted RBP13.43□□□□□ -0.26
PTCHD1-202ENST00000456522 NEXMIFQ5QGS0 1516 aa13.43□□□□□ -0.26
PTCHD1-202ENST00000456522 TMEM2Q9UHN6 1383 aa13.42□□□□□ -0.26
PTCHD1-202ENST00000456522 ADGRF5Q8IZF2 1346 aa13.4□□□□□ -0.26
PTCHD1-202ENST00000456522 HDGFP51858 240 aaKnown RBP13.4□□□□□ -0.26
PTCHD1-202ENST00000456522 NBPF8Q3BBV2 869 aa13.4□□□□□ -0.26
PTCHD1-202ENST00000456522 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.4□□□□□ -0.26
PTCHD1-202ENST00000456522 TXNDC2Q86VQ3 553 aa13.4□□□□□ -0.26
PTCHD1-202ENST00000456522 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.4□□□□□ -0.26
PTCHD1-202ENST00000456522 EID1Q9Y6B2 187 aa13.4□□□□□ -0.26
PTCHD1-202ENST00000456522 ZFYVE9O95405 1425 aa13.39□□□□□ -0.27
PTCHD1-202ENST00000456522 GALR2O43603 387 aaPredicted RBP13.39□□□□□ -0.27
PTCHD1-202ENST00000456522 HSPA2P54652 639 aa13.39□□□□□ -0.27
PTCHD1-202ENST00000456522 SLIT1O75093 1534 aa13.39□□□□□ -0.27
PTCHD1-202ENST00000456522 MYOM2P54296 1465 aa13.38□□□□□ -0.27
PTCHD1-202ENST00000456522 ARHGAP23Q9P227 1491 aa13.38□□□□□ -0.27
PTCHD1-202ENST00000456522 LTKP29376 864 aa13.38□□□□□ -0.27
PTCHD1-202ENST00000456522 CAMK2BQ13554 666 aa13.38□□□□□ -0.27
PTCHD1-202ENST00000456522 STAC3Q96MF2 364 aa13.38□□□□□ -0.27
PTCHD1-202ENST00000456522 LARP6Q9BRS8 491 aaKnown RBP13.38□□□□□ -0.27
PTCHD1-202ENST00000456522 PRAG1Q86YV5 1406 aa13.38□□□□□ -0.27
PTCHD1-202ENST00000456522 TRIM35Q9UPQ4 493 aa13.37□□□□□ -0.27
PTCHD1-202ENST00000456522 LMTK3Q96Q04 1460 aa13.36□□□□□ -0.27
PTCHD1-202ENST00000456522 ANKLE2Q86XL3 938 aa13.36□□□□□ -0.27
PTCHD1-202ENST00000456522 DDX27Q96GQ7 796 aaKnown RBP13.35□□□□□ -0.27
PTCHD1-202ENST00000456522 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.35□□□□□ -0.27
PTCHD1-202ENST00000456522 SCAF11Q99590 1463 aaKnown RBP13.35□□□□□ -0.27
PTCHD1-202ENST00000456522 NRXN1Q9ULB1 1477 aa13.35□□□□□ -0.27
PTCHD1-202ENST00000456522 CFAP70Q5T0N1 1121 aa13.34□□□□□ -0.27
PTCHD1-202ENST00000456522 LMOD2Q6P5Q4 547 aa13.34□□□□□ -0.27
PTCHD1-202ENST00000456522 POLR1AO95602 1720 aaPredicted RBP13.33□□□□□ -0.27
PTCHD1-202ENST00000456522 PIK3C2GO75747 1445 aa13.33□□□□□ -0.28
PTCHD1-202ENST00000456522 TRPM1Q7Z4N2 1603 aa13.33□□□□□ -0.28
PTCHD1-202ENST00000456522 TESPA1A2RU30 521 aaPredicted RBP13.33□□□□□ -0.28
PTCHD1-202ENST00000456522 PLEKHG1Q9ULL1 1385 aa13.32□□□□□ -0.28
PTCHD1-202ENST00000456522 IQGAP1P46940 1657 aa13.32□□□□□ -0.28
PTCHD1-202ENST00000456522 EVX2Q03828 476 aa13.32□□□□□ -0.28
PTCHD1-202ENST00000456522 NBPF1Q3BBV0 1214 aa13.32□□□□□ -0.28
PTCHD1-202ENST00000456522 C14orf93Q9H972 538 aaKnown RBP13.31□□□□□ -0.28
PTCHD1-202ENST00000456522 ROCK2O75116 1388 aaKnown RBP13.31□□□□□ -0.28
PTCHD1-202ENST00000456522 KIAA1210Q9ULL0 1709 aa13.3□□□□□ -0.28
PTCHD1-202ENST00000456522 RALGAPBQ86X10 1494 aa13.3□□□□□ -0.28
PTCHD1-202ENST00000456522 HAX1O00165 279 aa13.3□□□□□ -0.28
PTCHD1-202ENST00000456522 ASTLQ6HA08 431 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms