RNA–Protein interactions for RNA: ENST00000456518.3

SCMH1-211, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 2 BASIC

Gene SCMH1, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-211ENST00000456518 ARHGEF28Q8N1W1 1705 aaKnown RBP13.45□□□□□ -0.26
SCMH1-211ENST00000456518 NKTRP30414 1462 aaKnown RBP13.45□□□□□ -0.26
SCMH1-211ENST00000456518 LRRC7Q96NW7 1537 aa13.45□□□□□ -0.26
SCMH1-211ENST00000456518 EIF4G2P78344 907 aaKnown RBP eCLIP13.45□□□□□ -0.26
SCMH1-211ENST00000456518 MINK1Q8N4C8 1332 aaPredicted RBP13.45□□□□□ -0.26
SCMH1-211ENST00000456518 EIF3AQ14152 1382 aaKnown RBP13.43□□□□□ -0.26
SCMH1-211ENST00000456518 C14orf37Q86TY3 774 aa13.42□□□□□ -0.26
SCMH1-211ENST00000456518 TESK2Q96S53 571 aa13.42□□□□□ -0.26
SCMH1-211ENST00000456518 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.41□□□□□ -0.26
SCMH1-211ENST00000456518 SCAF1Q9H7N4 1312 aaKnown RBP13.41□□□□□ -0.26
SCMH1-211ENST00000456518 XIRP1Q702N8 1843 aaKnown RBP13.4□□□□□ -0.26
SCMH1-211ENST00000456518 C19orf44Q9H6X5 657 aa13.39□□□□□ -0.27
SCMH1-211ENST00000456518 ADGRL3Q9HAR2 1447 aa13.39□□□□□ -0.27
SCMH1-211ENST00000456518 NCOA3Q9Y6Q9 1424 aa13.39□□□□□ -0.27
SCMH1-211ENST00000456518 QRICH2Q9H0J4 1663 aa13.38□□□□□ -0.27
SCMH1-211ENST00000456518 PIP4K2BP78356 416 aa13.38□□□□□ -0.27
SCMH1-211ENST00000456518 NUTM2FA1L443 756 aa13.37□□□□□ -0.27
SCMH1-211ENST00000456518 C11orf95C9JLR9 678 aaPredicted RBP13.37□□□□□ -0.27
SCMH1-211ENST00000456518 WASLO00401 505 aaPredicted RBP13.37□□□□□ -0.27
SCMH1-211ENST00000456518 TOM1O60784 492 aa13.37□□□□□ -0.27
SCMH1-211ENST00000456518 CDK19Q9BWU1 502 aa13.37□□□□□ -0.27
SCMH1-211ENST00000456518 NALCNQ8IZF0 1738 aa13.37□□□□□ -0.27
SCMH1-211ENST00000456518 CABP2Q9NPB3 220 aa13.37□□□□□ -0.27
SCMH1-211ENST00000456518 MSH6P52701 1360 aa13.36□□□□□ -0.27
SCMH1-211ENST00000456518 DISP3Q9P2K9 1392 aa13.35□□□□□ -0.27
SCMH1-211ENST00000456518 SBNO2Q9Y2G9 1366 aa13.35□□□□□ -0.27
SCMH1-211ENST00000456518 TMF1P82094 1093 aa13.35□□□□□ -0.27
SCMH1-211ENST00000456518 TULP4Q9NRJ4 1543 aa13.35□□□□□ -0.27
SCMH1-211ENST00000456518 EVC2Q86UK5 1308 aa13.34□□□□□ -0.27
SCMH1-211ENST00000456518 ATF3P18847 181 aa13.34□□□□□ -0.27
SCMH1-211ENST00000456518 PRR36Q9H6K5 1346 aa13.34□□□□□ -0.27
SCMH1-211ENST00000456518 SRPK2P78362 688 aaKnown RBP13.33□□□□□ -0.28
SCMH1-211ENST00000456518 ADGRB2O60241 1585 aa13.33□□□□□ -0.28
SCMH1-211ENST00000456518 CADPS2Q86UW7 1296 aa13.32□□□□□ -0.28
SCMH1-211ENST00000456518 NUDT16Q96DE0 195 aaKnown RBP13.32□□□□□ -0.28
SCMH1-211ENST00000456518 POLR3GLQ9BT43 218 aa13.32□□□□□ -0.28
SCMH1-211ENST00000456518 CDC42BPGQ6DT37 1551 aa13.32□□□□□ -0.28
SCMH1-211ENST00000456518 SLC24A1O60721 1099 aa13.31□□□□□ -0.28
SCMH1-211ENST00000456518 DCCP43146 1447 aa13.31□□□□□ -0.28
SCMH1-211ENST00000456518 ORAI2Q96SN7 254 aa13.3□□□□□ -0.28
SCMH1-211ENST00000456518 SLAIN2Q9P270 581 aa13.3□□□□□ -0.28
SCMH1-211ENST00000456518 MST1RQ04912 1400 aa13.3□□□□□ -0.28
SCMH1-211ENST00000456518 KIF7Q2M1P5 1343 aa13.29□□□□□ -0.28
SCMH1-211ENST00000456518 FMN2Q9NZ56 1722 aa13.29□□□□□ -0.28
SCMH1-211ENST00000456518 C1orf167Q5SNV9 1468 aa13.29□□□□□ -0.28
SCMH1-211ENST00000456518 HSPA1LP34931 641 aa13.28□□□□□ -0.28
SCMH1-211ENST00000456518 ESCO1Q5FWF5 840 aa13.28□□□□□ -0.28
SCMH1-211ENST00000456518 WASHC2AQ641Q2 1341 aa13.28□□□□□ -0.28
SCMH1-211ENST00000456518 USP32Q8NFA0 1604 aa13.28□□□□□ -0.28
SCMH1-211ENST00000456518 PUS7Q96PZ0 661 aaKnown RBP13.28□□□□□ -0.28
SCMH1-211ENST00000456518 CABP1Q9NZU7 370 aa13.28□□□□□ -0.28
SCMH1-211ENST00000456518 CCDC61Q9Y6R9 512 aa13.28□□□□□ -0.28
SCMH1-211ENST00000456518 ATP7BP35670 1465 aa13.27□□□□□ -0.28
SCMH1-211ENST00000456518 ANKARQ7Z5J8 1434 aa13.27□□□□□ -0.29
SCMH1-211ENST00000456518 ZNF316A6NFI3 1004 aaPredicted RBP13.27□□□□□ -0.29
SCMH1-211ENST00000456518 CDCA8Q53HL2 280 aa13.27□□□□□ -0.29
SCMH1-211ENST00000456518 PMFBP1Q8TBY8 1022 aa13.27□□□□□ -0.29
SCMH1-211ENST00000456518 TMC1Q8TDI8 760 aa13.27□□□□□ -0.29
SCMH1-211ENST00000456518 SLC12A5Q9H2X9 1139 aa13.27□□□□□ -0.29
SCMH1-211ENST00000456518 CCDC7Q96M83 1385 aa13.26□□□□□ -0.29
SCMH1-211ENST00000456518 RGPD8O14715 1765 aaPredicted RBP13.26□□□□□ -0.29
SCMH1-211ENST00000456518 ATAD2Q6PL18 1390 aa13.26□□□□□ -0.29
SCMH1-211ENST00000456518 BRINP3Q76B58 766 aa13.25□□□□□ -0.29
SCMH1-211ENST00000456518 PHF8Q9UPP1 1060 aa13.25□□□□□ -0.29
SCMH1-211ENST00000456518 PPIP5K1Q6PFW1 1433 aa13.25□□□□□ -0.29
SCMH1-211ENST00000456518 DDX17Q92841 729 aaKnown RBP13.24□□□□□ -0.29
SCMH1-211ENST00000456518 PLEKHG3A1L390 1219 aa13.24□□□□□ -0.29
SCMH1-211ENST00000456518 FOXO3O43524 673 aa13.23□□□□□ -0.29
SCMH1-211ENST00000456518 ACEP12821 1306 aa13.22□□□□□ -0.29
SCMH1-211ENST00000456518 XPCQ01831 940 aaPredicted RBP13.21□□□□□ -0.29
SCMH1-211ENST00000456518 ILDR2Q71H61 639 aa13.21□□□□□ -0.29
SCMH1-211ENST00000456518 TOPAZ1Q8N9V7 1692 aa13.21□□□□□ -0.29
SCMH1-211ENST00000456518 NGDNQ8NEJ9 315 aaKnown RBP13.21□□□□□ -0.29
SCMH1-211ENST00000456518 CD163L1Q9NR16 1453 aa13.2□□□□□ -0.3
SCMH1-211ENST00000456518 PANK3Q9H999 370 aa13.2□□□□□ -0.3
SCMH1-211ENST00000456518 POLR3AO14802 1390 aaPredicted RBP13.19□□□□□ -0.3
SCMH1-211ENST00000456518 DDX10Q13206 875 aaKnown RBP13.19□□□□□ -0.3
SCMH1-211ENST00000456518 ROBO1Q9Y6N7 1651 aa13.19□□□□□ -0.3
SCMH1-211ENST00000456518 CPSF1Q10570 1443 aaKnown RBP13.18□□□□□ -0.3
SCMH1-211ENST00000456518 MYOM1P52179 1685 aa13.18□□□□□ -0.3
SCMH1-211ENST00000456518 PSME1Q06323 249 aa13.18□□□□□ -0.3
SCMH1-211ENST00000456518 KRT28Q7Z3Y7 464 aa13.18□□□□□ -0.3
SCMH1-211ENST00000456518 CARD14Q9BXL6 1004 aa13.18□□□□□ -0.3
SCMH1-211ENST00000456518 ITSN1Q15811 1721 aa13.18□□□□□ -0.3
SCMH1-211ENST00000456518 A0A1W2PP64 1363 aa13.17□□□□□ -0.3
SCMH1-211ENST00000456518 NINLQ9Y2I6 1382 aa13.17□□□□□ -0.3
SCMH1-211ENST00000456518 HDGFL2Q7Z4V5 671 aaPredicted RBP13.17□□□□□ -0.3
SCMH1-211ENST00000456518 ZNF692Q9BU19 519 aaPredicted RBP13.17□□□□□ -0.3
SCMH1-211ENST00000456518 TERF2IPQ9NYB0 399 aa13.17□□□□□ -0.3
SCMH1-211ENST00000456518 ANKRD36BQ8N2N9 1353 aa13.17□□□□□ -0.3
SCMH1-211ENST00000456518 KTN1Q86UP2 1357 aaKnown RBP13.16□□□□□ -0.3
SCMH1-211ENST00000456518 NPHP3Q7Z494 1330 aa13.16□□□□□ -0.3
SCMH1-211ENST00000456518 KIF1AQ12756 1690 aa13.16□□□□□ -0.3
SCMH1-211ENST00000456518 MYT1Q01538 1121 aa13.15□□□□□ -0.3
SCMH1-211ENST00000456518 SOS2Q07890 1332 aaPredicted RBP13.15□□□□□ -0.3
SCMH1-211ENST00000456518 USP6P35125 1406 aa13.15□□□□□ -0.3
SCMH1-211ENST00000456518 MED1Q15648 1581 aaPredicted RBP13.15□□□□□ -0.3
SCMH1-211ENST00000456518 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.14□□□□□ -0.31
SCMH1-211ENST00000456518 PHF23Q9BUL5 403 aaPredicted RBP13.14□□□□□ -0.31
SCMH1-211ENST00000456518 PXDNQ92626 1479 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms