RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ZBTB9Q96C00 473 aa5.75□□□□□ -1.49
DEPDC1-202ENST00000456315 LNPKQ9C0E8 428 aa5.75□□□□□ -1.49
DEPDC1-202ENST00000456315 ZNF777Q9ULD5 760 aaPredicted RBP5.75□□□□□ -1.49
DEPDC1-202ENST00000456315 SAMD9Q5K651 1589 aa5.75□□□□□ -1.49
DEPDC1-202ENST00000456315 BAG4O95429 457 aaKnown RBP5.74□□□□□ -1.49
DEPDC1-202ENST00000456315 NOL7Q9UMY1 257 aaKnown RBP5.74□□□□□ -1.49
DEPDC1-202ENST00000456315 PRAG1Q86YV5 1406 aa5.74□□□□□ -1.49
DEPDC1-202ENST00000456315 L1TD1Q5T7N2 865 aaKnown RBP5.74□□□□□ -1.49
DEPDC1-202ENST00000456315 OTUD7AQ8TE49 926 aaPredicted RBP5.74□□□□□ -1.49
DEPDC1-202ENST00000456315 UQCRHLA0A096LP55 91 aa5.74□□□□□ -1.49
DEPDC1-202ENST00000456315 UQCRHP07919 91 aa5.74□□□□□ -1.49
DEPDC1-202ENST00000456315 CAPN2P17655 700 aa5.74□□□□□ -1.49
DEPDC1-202ENST00000456315 FBLN1P23142 703 aa5.74□□□□□ -1.49
DEPDC1-202ENST00000456315 NASPP49321 788 aaPredicted RBP5.74□□□□□ -1.49
DEPDC1-202ENST00000456315 MRC2Q9UBG0 1479 aa5.74□□□□□ -1.49
DEPDC1-202ENST00000456315 ZNF500O60304 480 aaPredicted RBP5.74□□□□□ -1.49
DEPDC1-202ENST00000456315 SMC5Q8IY18 1101 aa5.74□□□□□ -1.49
DEPDC1-202ENST00000456315 COL17A1Q9UMD9 1497 aaPredicted RBP5.74□□□□□ -1.49
DEPDC1-202ENST00000456315 TRIM27P14373 513 aa5.73□□□□□ -1.49
DEPDC1-202ENST00000456315 NFATC2IPQ8NCF5 419 aa5.73□□□□□ -1.49
DEPDC1-202ENST00000456315 CADPSQ9ULU8 1353 aa5.73□□□□□ -1.49
DEPDC1-202ENST00000456315 DMTNQ08495 405 aa5.73□□□□□ -1.49
DEPDC1-202ENST00000456315 PPP4R3BQ5MIZ7 849 aa5.73□□□□□ -1.49
DEPDC1-202ENST00000456315 GDPD2Q9HCC8 539 aa5.73□□□□□ -1.49
DEPDC1-202ENST00000456315 A2MP01023 1474 aa5.73□□□□□ -1.49
DEPDC1-202ENST00000456315 TNNT2P45379 298 aaPredicted RBP5.73□□□□□ -1.49
DEPDC1-202ENST00000456315 RBM25P49756 843 aaKnown RBP5.73□□□□□ -1.49
DEPDC1-202ENST00000456315 PDE3AQ14432 1141 aa5.73□□□□□ -1.49
DEPDC1-202ENST00000456315 GLIPR1L2Q4G1C9 344 aa5.73□□□□□ -1.49
DEPDC1-202ENST00000456315 CAVIN1Q6NZI2 390 aaKnown RBP5.73□□□□□ -1.49
DEPDC1-202ENST00000456315 CERS3Q8IU89 383 aa5.73□□□□□ -1.49
DEPDC1-202ENST00000456315 ROCK2O75116 1388 aaKnown RBP5.73□□□□□ -1.49
DEPDC1-202ENST00000456315 ST7Q9NRC1 585 aa5.73□□□□□ -1.49
DEPDC1-202ENST00000456315 KDM5DQ9BY66 1539 aa5.73□□□□□ -1.49
DEPDC1-202ENST00000456315 ROCK1Q13464 1354 aa5.73□□□□□ -1.49
DEPDC1-202ENST00000456315 GPRASP1Q5JY77 1395 aa5.73□□□□□ -1.49
DEPDC1-202ENST00000456315 U2AF2P26368 475 aaKnown RBP eCLIP5.72□□□□□ -1.49
DEPDC1-202ENST00000456315 C16orf71Q8IYS4 520 aaPredicted RBP5.72□□□□□ -1.49
DEPDC1-202ENST00000456315 TCP11L2Q8N4U5 519 aa5.72□□□□□ -1.49
DEPDC1-202ENST00000456315 NKTRP30414 1462 aaKnown RBP5.72□□□□□ -1.49
DEPDC1-202ENST00000456315 IL25Q9H293 177 aa5.72□□□□□ -1.49
DEPDC1-202ENST00000456315 NAP1L2Q9ULW6 460 aaPredicted RBP5.72□□□□□ -1.49
DEPDC1-202ENST00000456315 ZKSCAN5Q9Y2L8 839 aa5.72□□□□□ -1.49
DEPDC1-202ENST00000456315 ANKRD50Q9ULJ7 1429 aa5.72□□□□□ -1.49
DEPDC1-202ENST00000456315 MLECQ14165 292 aa5.72□□□□□ -1.49
DEPDC1-202ENST00000456315 SSH1Q8WYL5 1049 aa5.72□□□□□ -1.49
DEPDC1-202ENST00000456315 SMARCA5O60264 1052 aaPredicted RBP5.72□□□□□ -1.49
DEPDC1-202ENST00000456315 GSPT1P15170 499 aaKnown RBP5.71□□□□□ -1.49
DEPDC1-202ENST00000456315 NUP153P49790 1475 aaKnown RBP5.71□□□□□ -1.5
DEPDC1-202ENST00000456315 KIF14Q15058 1648 aa5.71□□□□□ -1.5
DEPDC1-202ENST00000456315 ZSCAN23Q3MJ62 389 aa5.71□□□□□ -1.5
DEPDC1-202ENST00000456315 FOXD4L6Q3SYB3 417 aaPredicted RBP5.71□□□□□ -1.5
DEPDC1-202ENST00000456315 FOXD4L3Q6VB84 417 aaPredicted RBP5.71□□□□□ -1.5
DEPDC1-202ENST00000456315 CLEC17AQ6ZS10 378 aa5.71□□□□□ -1.5
DEPDC1-202ENST00000456315 C1orf115Q9H7X2 142 aa5.71□□□□□ -1.5
DEPDC1-202ENST00000456315 ABCA10Q8WWZ4 1543 aa5.71□□□□□ -1.5
DEPDC1-202ENST00000456315 GPATCH8Q9UKJ3 1502 aaKnown RBP5.71□□□□□ -1.5
DEPDC1-202ENST00000456315 HNRNPMP52272 730 aaKnown RBP eCLIP5.7□□□□□ -1.5
DEPDC1-202ENST00000456315 CHMP4CQ96CF2 233 aa5.7□□□□□ -1.5
DEPDC1-202ENST00000456315 BCL2L12Q9HB09 334 aa5.7□□□□□ -1.5
DEPDC1-202ENST00000456315 CGNL1Q0VF96 1302 aa5.7□□□□□ -1.5
DEPDC1-202ENST00000456315 MAPK8IP3Q9UPT6 1336 aa5.7□□□□□ -1.5
DEPDC1-202ENST00000456315 ZNF445P59923 1031 aa5.7□□□□□ -1.5
DEPDC1-202ENST00000456315 KLHL40Q2TBA0 621 aa5.7□□□□□ -1.5
DEPDC1-202ENST00000456315 FOXD4L5Q5VV16 416 aaPredicted RBP5.7□□□□□ -1.5
DEPDC1-202ENST00000456315 FOXD4L4Q8WXT5 416 aaPredicted RBP5.7□□□□□ -1.5
DEPDC1-202ENST00000456315 ZBTB40Q9NUA8 1239 aa5.7□□□□□ -1.5
DEPDC1-202ENST00000456315 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.7□□□□□ -1.5
DEPDC1-202ENST00000456315 SYCE3A1L190 88 aa5.7□□□□□ -1.5
DEPDC1-202ENST00000456315 SMAP1Q8IYB5 467 aaPredicted RBP5.7□□□□□ -1.5
DEPDC1-202ENST00000456315 DDX49Q9Y6V7 483 aaKnown RBP5.7□□□□□ -1.5
DEPDC1-202ENST00000456315 ABCC10Q5T3U5 1492 aa5.7□□□□□ -1.5
DEPDC1-202ENST00000456315 TPM2P07951 284 aa5.7□□□□□ -1.5
DEPDC1-202ENST00000456315 GADD45BO75293 160 aaPredicted RBP5.69□□□□□ -1.5
DEPDC1-202ENST00000456315 KRT24Q2M2I5 525 aa5.69□□□□□ -1.5
DEPDC1-202ENST00000456315 USP26Q9BXU7 913 aa5.69□□□□□ -1.5
DEPDC1-202ENST00000456315 SLC12A5Q9H2X9 1139 aa5.69□□□□□ -1.5
DEPDC1-202ENST00000456315 TBC1D9Q6ZT07 1266 aa5.69□□□□□ -1.5
DEPDC1-202ENST00000456315 TMEM57Q8N5G2 664 aa5.69□□□□□ -1.5
DEPDC1-202ENST00000456315 CFDP1Q9UEE9 299 aaPredicted RBP5.69□□□□□ -1.5
DEPDC1-202ENST00000456315 EIF4G3O43432 1585 aaKnown RBP5.69□□□□□ -1.5
DEPDC1-202ENST00000456315 CD109Q6YHK3 1445 aa5.69□□□□□ -1.5
DEPDC1-202ENST00000456315 ARHGEF12Q9NZN5 1544 aa5.69□□□□□ -1.5
DEPDC1-202ENST00000456315 EHBP1L1Q8N3D4 1523 aa5.69□□□□□ -1.5
DEPDC1-202ENST00000456315 TOPBP1Q92547 1522 aa5.69□□□□□ -1.5
DEPDC1-202ENST00000456315 DNMT1P26358 1616 aaKnown RBP5.69□□□□□ -1.5
DEPDC1-202ENST00000456315 SLFN14P0C7P3 912 aa5.69□□□□□ -1.5
DEPDC1-202ENST00000456315 KCNF1Q9H3M0 494 aa5.69□□□□□ -1.5
DEPDC1-202ENST00000456315 PTPRGP23470 1445 aa5.69□□□□□ -1.5
DEPDC1-202ENST00000456315 SYNMO15061 1565 aa5.69□□□□□ -1.5
DEPDC1-202ENST00000456315 ERBB3P21860 1342 aa5.68□□□□□ -1.5
DEPDC1-202ENST00000456315 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.68□□□□□ -1.5
DEPDC1-202ENST00000456315 ZFP91Q96JP5 570 aaPredicted RBP5.68□□□□□ -1.5
DEPDC1-202ENST00000456315 THUMPD2Q9BTF0 503 aaKnown RBP5.68□□□□□ -1.5
DEPDC1-202ENST00000456315 PYCARDQ9ULZ3 195 aa5.68□□□□□ -1.5
DEPDC1-202ENST00000456315 PLB1Q6P1J6 1458 aa5.68□□□□□ -1.5
DEPDC1-202ENST00000456315 TRPM1Q7Z4N2 1603 aa5.68□□□□□ -1.5
DEPDC1-202ENST00000456315 RBM6P78332 1123 aaKnown RBP5.68□□□□□ -1.5
DEPDC1-202ENST00000456315 TSPYL6Q8N831 410 aa5.68□□□□□ -1.5
DEPDC1-202ENST00000456315 PRPF40AO75400 957 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms