RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 CDC42BPGQ6DT37 1551 aa32.27■■■□□ 2.76
SEC22C-213ENST00000456222 KNDC1Q76NI1 1749 aa32.26■■■□□ 2.76
SEC22C-213ENST00000456222 PLEKHH1Q9ULM0 1364 aa32.25■■■□□ 2.75
SEC22C-213ENST00000456222 ACIN1Q9UKV3 1341 aaKnown RBP32.24■■■□□ 2.75
SEC22C-213ENST00000456222 ABCC11Q96J66 1382 aa32.22■■■□□ 2.75
SEC22C-213ENST00000456222 NRXN1Q9ULB1 1477 aa32.22■■■□□ 2.75
SEC22C-213ENST00000456222 SOS2Q07890 1332 aaPredicted RBP32.21■■■□□ 2.75
SEC22C-213ENST00000456222 YTHDC2Q9H6S0 1430 aaKnown RBP32.2■■■□□ 2.75
SEC22C-213ENST00000456222 ZNF772Q68DY9 489 aaPredicted RBP32.19■■■□□ 2.74
SEC22C-213ENST00000456222 MYOM2P54296 1465 aa32.18■■■□□ 2.74
SEC22C-213ENST00000456222 C14orf93Q9H972 538 aaKnown RBP32.17■■■□□ 2.74
SEC22C-213ENST00000456222 CFAP70Q5T0N1 1121 aa32.16■■■□□ 2.74
SEC22C-213ENST00000456222 AFF2P51816 1311 aa32.16■■■□□ 2.74
SEC22C-213ENST00000456222 NUTM2FA1L443 756 aa32.15■■■□□ 2.74
SEC22C-213ENST00000456222 ESCO1Q5FWF5 840 aa32.13■■■□□ 2.73
SEC22C-213ENST00000456222 FMN2Q9NZ56 1722 aa32.12■■■□□ 2.73
SEC22C-213ENST00000456222 C8orf37Q96NL8 207 aa32.11■■■□□ 2.73
SEC22C-213ENST00000456222 PXDNQ92626 1479 aa32.1■■■□□ 2.73
SEC22C-213ENST00000456222 ADAMTS2O95450 1211 aa32.09■■■□□ 2.73
SEC22C-213ENST00000456222 XPCQ01831 940 aaPredicted RBP32.08■■■□□ 2.73
SEC22C-213ENST00000456222 FOXO3O43524 673 aa32.07■■■□□ 2.72
SEC22C-213ENST00000456222 COL22A1Q8NFW1 1626 aaPredicted RBP32.07■■■□□ 2.72
SEC22C-213ENST00000456222 RGPD8O14715 1765 aaPredicted RBP32.06■■■□□ 2.72
SEC22C-213ENST00000456222 NPHP3Q7Z494 1330 aa32.05■■■□□ 2.72
SEC22C-213ENST00000456222 RXRBP28702 533 aa32.04■■■□□ 2.72
SEC22C-213ENST00000456222 SIRT1Q96EB6 747 aa32.04■■■□□ 2.72
SEC22C-213ENST00000456222 DHX57Q6P158 1386 aaKnown RBP32.04■■■□□ 2.72
SEC22C-213ENST00000456222 ADGRB1O14514 1584 aa32.02■■■□□ 2.72
SEC22C-213ENST00000456222 HRCP23327 699 aa32■■■□□ 2.71
SEC22C-213ENST00000456222 SAFB2Q14151 953 aaKnown RBP eCLIP32■■■□□ 2.71
SEC22C-213ENST00000456222 PRAM1Q96QH2 718 aa32■■■□□ 2.71
SEC22C-213ENST00000456222 NGLY1Q96IV0 654 aa31.99■■■□□ 2.71
SEC22C-213ENST00000456222 KDM2AQ9Y2K7 1162 aa31.98■■■□□ 2.71
SEC22C-213ENST00000456222 CDK12Q9NYV4 1490 aaPredicted RBP31.97■■■□□ 2.71
SEC22C-213ENST00000456222 KIF1AQ12756 1690 aa31.97■■■□□ 2.71
SEC22C-213ENST00000456222 QTRT2Q9H974 415 aaKnown RBP31.97■■■□□ 2.71
SEC22C-213ENST00000456222 DLC1Q96QB1 1528 aa31.96■■■□□ 2.71
SEC22C-213ENST00000456222 DCAF11Q8TEB1 546 aa31.96■■■□□ 2.71
SEC22C-213ENST00000456222 RGS12O14924 1447 aa31.93■■■□□ 2.7
SEC22C-213ENST00000456222 MARF1Q9Y4F3 1742 aaKnown RBP31.92■■■□□ 2.7
SEC22C-213ENST00000456222 USP32Q8NFA0 1604 aa31.92■■■□□ 2.7
SEC22C-213ENST00000456222 UPF1Q92900 1129 aaKnown RBP eCLIP31.91■■■□□ 2.7
SEC22C-213ENST00000456222 RBM6P78332 1123 aaKnown RBP31.9■■■□□ 2.7
SEC22C-213ENST00000456222 TRAK1Q9UPV9 953 aa31.9■■■□□ 2.7
SEC22C-213ENST00000456222 FNBP4Q8N3X1 1017 aaPredicted RBP31.89■■■□□ 2.7
SEC22C-213ENST00000456222 POGKQ9P215 609 aa31.89■■■□□ 2.7
SEC22C-213ENST00000456222 USP21Q9UK80 565 aa31.88■■■□□ 2.69
SEC22C-213ENST00000456222 PHF8Q9UPP1 1060 aa31.88■■■□□ 2.69
SEC22C-213ENST00000456222 SPATA31A3Q5VYP0 1347 aa31.88■■■□□ 2.69
SEC22C-213ENST00000456222 ADGRB2O60241 1585 aa31.88■■■□□ 2.69
SEC22C-213ENST00000456222 KRT28Q7Z3Y7 464 aa31.87■■■□□ 2.69
SEC22C-213ENST00000456222 HIRIP3Q9BW71 556 aaPredicted RBP31.85■■■□□ 2.69
SEC22C-213ENST00000456222 BCL9LQ86UU0 1499 aa31.83■■■□□ 2.69
SEC22C-213ENST00000456222 ATRNO75882 1429 aa31.83■■■□□ 2.69
SEC22C-213ENST00000456222 MINK1Q8N4C8 1332 aaPredicted RBP31.81■■■□□ 2.68
SEC22C-213ENST00000456222 TRPC5Q9UL62 973 aaPredicted RBP31.8■■■□□ 2.68
SEC22C-213ENST00000456222 ANKARQ7Z5J8 1434 aa31.8■■■□□ 2.68
SEC22C-213ENST00000456222 ARHGEF28Q8N1W1 1705 aaKnown RBP31.8■■■□□ 2.68
SEC22C-213ENST00000456222 TNS3Q68CZ2 1445 aa31.79■■■□□ 2.68
SEC22C-213ENST00000456222 PMFBP1Q8TBY8 1022 aa31.79■■■□□ 2.68
SEC22C-213ENST00000456222 PRR36Q9H6K5 1346 aa31.78■■■□□ 2.68
SEC22C-213ENST00000456222 STAC3Q96MF2 364 aa31.78■■■□□ 2.68
SEC22C-213ENST00000456222 EP400Q96L91 3159 aa31.77■■■□□ 2.68
SEC22C-213ENST00000456222 CABLES1Q8TDN4 633 aa31.75■■■□□ 2.67
SEC22C-213ENST00000456222 ABCA3Q99758 1704 aa31.75■■■□□ 2.67
SEC22C-213ENST00000456222 SBNO1A3KN83 1393 aa31.73■■■□□ 2.67
SEC22C-213ENST00000456222 TRPM3Q9HCF6 1732 aaPredicted RBP31.73■■■□□ 2.67
SEC22C-213ENST00000456222 PLEKHG5O94827 1062 aa31.73■■■□□ 2.67
SEC22C-213ENST00000456222 TULP4Q9NRJ4 1543 aa31.73■■■□□ 2.67
SEC22C-213ENST00000456222 PSME1Q06323 249 aa31.72■■■□□ 2.67
SEC22C-213ENST00000456222 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.72■■■□□ 2.67
SEC22C-213ENST00000456222 SLIT2O94813 1529 aa31.71■■■□□ 2.67
SEC22C-213ENST00000456222 WASLO00401 505 aaPredicted RBP31.7■■■□□ 2.67
SEC22C-213ENST00000456222 LMOD2Q6P5Q4 547 aa31.68■■■□□ 2.66
SEC22C-213ENST00000456222 KIAA1210Q9ULL0 1709 aa31.67■■■□□ 2.66
SEC22C-213ENST00000456222 ALS2Q96Q42 1657 aa31.66■■■□□ 2.66
SEC22C-213ENST00000456222 GLI3P10071 1580 aa31.65■■■□□ 2.66
SEC22C-213ENST00000456222 ARHGEF10O15013 1369 aa31.65■■■□□ 2.66
SEC22C-213ENST00000456222 PLCH1Q4KWH8 1693 aa31.64■■■□□ 2.66
SEC22C-213ENST00000456222 NBPF1Q3BBV0 1214 aa31.64■■■□□ 2.66
SEC22C-213ENST00000456222 UNC5CLQ8IV45 518 aa31.64■■■□□ 2.66
SEC22C-213ENST00000456222 GJD4Q96KN9 370 aaPredicted RBP31.64■■■□□ 2.66
SEC22C-213ENST00000456222 EIF3AQ14152 1382 aaKnown RBP31.64■■■□□ 2.66
SEC22C-213ENST00000456222 ATP7BP35670 1465 aa31.63■■■□□ 2.65
SEC22C-213ENST00000456222 HAP1P54257 671 aaPredicted RBP31.62■■■□□ 2.65
SEC22C-213ENST00000456222 RALGAPBQ86X10 1494 aa31.61■■■□□ 2.65
SEC22C-213ENST00000456222 ATAD2Q6PL18 1390 aa31.59■■■□□ 2.65
SEC22C-213ENST00000456222 ITSN1Q15811 1721 aa31.59■■■□□ 2.65
SEC22C-213ENST00000456222 GPRASP1Q5JY77 1395 aa31.58■■■□□ 2.65
SEC22C-213ENST00000456222 NWD2Q9ULI1 1742 aa31.58■■■□□ 2.65
SEC22C-213ENST00000456222 NUDT16Q96DE0 195 aaKnown RBP31.57■■■□□ 2.64
SEC22C-213ENST00000456222 CRYBG1Q9Y4K1 1723 aa31.56■■■□□ 2.64
SEC22C-213ENST00000456222 FAM83GA6ND36 823 aa31.55■■■□□ 2.64
SEC22C-213ENST00000456222 NGDNQ8NEJ9 315 aaKnown RBP31.55■■■□□ 2.64
SEC22C-213ENST00000456222 CDK19Q9BWU1 502 aa31.55■■■□□ 2.64
SEC22C-213ENST00000456222 TOPAZ1Q8N9V7 1692 aa31.54■■■□□ 2.64
SEC22C-213ENST00000456222 BRWD3Q6RI45 1802 aa31.54■■■□□ 2.64
SEC22C-213ENST00000456222 SIN3AQ96ST3 1273 aa31.51■■■□□ 2.63
SEC22C-213ENST00000456222 NRAPQ86VF7 1730 aa31.51■■■□□ 2.63
SEC22C-213ENST00000456222 L3MBTL2Q969R5 705 aa31.5■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms