RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 EIF3AQ14152 1382 aaKnown RBP10.04□□□□□ -0.8
HDAC9-218ENST00000456174 FRAT1Q92837 279 aaPredicted RBP10.04□□□□□ -0.8
HDAC9-218ENST00000456174 VGFO15240 615 aaPredicted RBP10.03□□□□□ -0.8
HDAC9-218ENST00000456174 SPATA31D1Q6ZQQ2 1576 aa10.03□□□□□ -0.8
HDAC9-218ENST00000456174 CENPJQ9HC77 1338 aaPredicted RBP10.03□□□□□ -0.8
HDAC9-218ENST00000456174 TRHP20396 242 aaPredicted RBP10.02□□□□□ -0.8
HDAC9-218ENST00000456174 HNRNPUQ00839 825 aaKnown RBP eCLIP10.02□□□□□ -0.8
HDAC9-218ENST00000456174 C14orf93Q9H972 538 aaKnown RBP10.02□□□□□ -0.8
HDAC9-218ENST00000456174 HSP90AA1P07900 732 aaKnown RBP10.02□□□□□ -0.81
HDAC9-218ENST00000456174 NUTM2DQ5VT03 806 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-218ENST00000456174 ESF1Q9H501 851 aaKnown RBP10.02□□□□□ -0.81
HDAC9-218ENST00000456174 MYO3AQ8NEV4 1616 aa10.01□□□□□ -0.81
HDAC9-218ENST00000456174 CNGB1Q14028 1251 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-218ENST00000456174 CCDC184Q52MB2 194 aa10.01□□□□□ -0.81
HDAC9-218ENST00000456174 ZFYVE9O95405 1425 aa10□□□□□ -0.81
HDAC9-218ENST00000456174 CALD1Q05682 793 aaKnown RBP10□□□□□ -0.81
HDAC9-218ENST00000456174 ADGRB1O14514 1584 aa10□□□□□ -0.81
HDAC9-218ENST00000456174 KDM5AP29375 1690 aaKnown RBP10□□□□□ -0.81
HDAC9-218ENST00000456174 ZMYM3Q14202 1370 aa9.99□□□□□ -0.81
HDAC9-218ENST00000456174 CDCA8Q53HL2 280 aa9.99□□□□□ -0.81
HDAC9-218ENST00000456174 MRS2Q9HD23 443 aa9.99□□□□□ -0.81
HDAC9-218ENST00000456174 RRAGDQ9NQL2 400 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-218ENST00000456174 STAG3Q9UJ98 1225 aa9.99□□□□□ -0.81
HDAC9-218ENST00000456174 PRDM4Q9UKN5 801 aa9.99□□□□□ -0.81
HDAC9-218ENST00000456174 TMEM132EQ6IEE7 984 aa9.99□□□□□ -0.81
HDAC9-218ENST00000456174 MYOM1P52179 1685 aa9.98□□□□□ -0.81
HDAC9-218ENST00000456174 QRICH2Q9H0J4 1663 aa9.98□□□□□ -0.81
HDAC9-218ENST00000456174 SLC4A2P04920 1241 aa9.98□□□□□ -0.81
HDAC9-218ENST00000456174 NFKBIBQ15653 356 aa9.98□□□□□ -0.81
HDAC9-218ENST00000456174 BCL11BQ9C0K0 894 aaPredicted RBP9.98□□□□□ -0.81
HDAC9-218ENST00000456174 PER1O15534 1290 aaPredicted RBP9.98□□□□□ -0.81
HDAC9-218ENST00000456174 PANK3Q9H999 370 aa9.98□□□□□ -0.81
HDAC9-218ENST00000456174 KTN1Q86UP2 1357 aaKnown RBP9.97□□□□□ -0.81
HDAC9-218ENST00000456174 ARHGEF28Q8N1W1 1705 aaKnown RBP9.97□□□□□ -0.81
HDAC9-218ENST00000456174 TRAK1Q9UPV9 953 aa9.97□□□□□ -0.81
HDAC9-218ENST00000456174 A2ML1A8K2U0 1454 aa9.96□□□□□ -0.81
HDAC9-218ENST00000456174 RALBP1Q15311 655 aa9.96□□□□□ -0.82
HDAC9-218ENST00000456174 SBNO2Q9Y2G9 1366 aa9.96□□□□□ -0.82
HDAC9-218ENST00000456174 FAM9BQ8IZU0 186 aa9.95□□□□□ -0.82
HDAC9-218ENST00000456174 RNF123Q5XPI4 1314 aa9.95□□□□□ -0.82
HDAC9-218ENST00000456174 DDRGK1Q96HY6 314 aa9.94□□□□□ -0.82
HDAC9-218ENST00000456174 MYBBP1AQ9BQG0 1328 aaKnown RBP9.94□□□□□ -0.82
HDAC9-218ENST00000456174 ASXL1Q8IXJ9 1541 aa9.94□□□□□ -0.82
HDAC9-218ENST00000456174 FER1L4A9Z1Z3 1794 aa9.94□□□□□ -0.82
HDAC9-218ENST00000456174 DNAJC5Q9H3Z4 198 aa9.94□□□□□ -0.82
HDAC9-218ENST00000456174 PARD3Q8TEW0 1356 aa9.94□□□□□ -0.82
HDAC9-218ENST00000456174 TNRQ92752 1358 aa9.94□□□□□ -0.82
HDAC9-218ENST00000456174 RIMS2Q9UQ26 1411 aa9.94□□□□□ -0.82
HDAC9-218ENST00000456174 ALKQ9UM73 1620 aa9.94□□□□□ -0.82
HDAC9-218ENST00000456174 TAF7LQ5H9L4 462 aa9.93□□□□□ -0.82
HDAC9-218ENST00000456174 NAP1L5Q96NT1 182 aaPredicted RBP9.93□□□□□ -0.82
HDAC9-218ENST00000456174 ZBED9Q6R2W3 1325 aa9.93□□□□□ -0.82
HDAC9-218ENST00000456174 UBR1Q8IWV7 1749 aa9.93□□□□□ -0.82
HDAC9-218ENST00000456174 C3P01024 1663 aa9.93□□□□□ -0.82
HDAC9-218ENST00000456174 TCERG1O14776 1098 aaKnown RBP9.93□□□□□ -0.82
HDAC9-218ENST00000456174 CLCN1P35523 988 aa9.93□□□□□ -0.82
HDAC9-218ENST00000456174 CC2D1BQ5T0F9 858 aaKnown RBP9.93□□□□□ -0.82
HDAC9-218ENST00000456174 TMC1Q8TDI8 760 aa9.92□□□□□ -0.82
HDAC9-218ENST00000456174 KNSTRNQ9Y448 316 aa9.92□□□□□ -0.82
HDAC9-218ENST00000456174 BRD4O60885 1362 aaPredicted RBP9.92□□□□□ -0.82
HDAC9-218ENST00000456174 PNNQ9H307 717 aaKnown RBP9.91□□□□□ -0.82
HDAC9-218ENST00000456174 SETD1AO15047 1707 aaKnown RBP9.91□□□□□ -0.82
HDAC9-218ENST00000456174 TPRNQ4KMQ1 711 aa9.91□□□□□ -0.82
HDAC9-218ENST00000456174 STK26Q9P289 416 aa9.91□□□□□ -0.82
HDAC9-218ENST00000456174 YTHDC2Q9H6S0 1430 aaKnown RBP9.91□□□□□ -0.82
HDAC9-218ENST00000456174 MS4A1P11836 297 aa9.9□□□□□ -0.82
HDAC9-218ENST00000456174 PDCL3Q9H2J4 239 aa9.9□□□□□ -0.82
HDAC9-218ENST00000456174 SMG6Q86US8 1419 aaKnown RBP9.9□□□□□ -0.82
HDAC9-218ENST00000456174 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.9□□□□□ -0.82
HDAC9-218ENST00000456174 BACH2Q9BYV9 841 aa9.9□□□□□ -0.82
HDAC9-218ENST00000456174 CEBPAP49715 358 aaPredicted RBP9.89□□□□□ -0.83
HDAC9-218ENST00000456174 NLRP13Q86W25 1043 aa9.89□□□□□ -0.83
HDAC9-218ENST00000456174 PNISRQ8TF01 805 aaKnown RBP9.89□□□□□ -0.83
HDAC9-218ENST00000456174 NRXN3Q9Y4C0 1643 aa9.89□□□□□ -0.83
HDAC9-218ENST00000456174 PTPRMP28827 1452 aa9.89□□□□□ -0.83
HDAC9-218ENST00000456174 PDE4AP27815 886 aa9.89□□□□□ -0.83
HDAC9-218ENST00000456174 NPM2Q86SE8 214 aaKnown RBP9.89□□□□□ -0.83
HDAC9-218ENST00000456174 TULP4Q9NRJ4 1543 aa9.88□□□□□ -0.83
HDAC9-218ENST00000456174 EVC2Q86UK5 1308 aa9.88□□□□□ -0.83
HDAC9-218ENST00000456174 HDGFP51858 240 aaKnown RBP9.88□□□□□ -0.83
HDAC9-218ENST00000456174 SAFB2Q14151 953 aaKnown RBP eCLIP9.88□□□□□ -0.83
HDAC9-218ENST00000456174 NLRP1Q9C000 1473 aa9.88□□□□□ -0.83
HDAC9-218ENST00000456174 RNF216Q9NWF9 866 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-218ENST00000456174 L1TD1Q5T7N2 865 aaKnown RBP9.87□□□□□ -0.83
HDAC9-218ENST00000456174 TMEM2Q9UHN6 1383 aa9.87□□□□□ -0.83
HDAC9-218ENST00000456174 PUS7Q96PZ0 661 aaKnown RBP9.87□□□□□ -0.83
HDAC9-218ENST00000456174 PRAM1Q96QH2 718 aa9.87□□□□□ -0.83
HDAC9-218ENST00000456174 POGKQ9P215 609 aa9.87□□□□□ -0.83
HDAC9-218ENST00000456174 NPC1L1Q9UHC9 1359 aa9.86□□□□□ -0.83
HDAC9-218ENST00000456174 TPM2P07951 284 aa9.86□□□□□ -0.83
HDAC9-218ENST00000456174 LRPPRCP42704 1394 aaKnown RBP9.85□□□□□ -0.83
HDAC9-218ENST00000456174 CARD14Q9BXL6 1004 aa9.85□□□□□ -0.83
HDAC9-218ENST00000456174 DLC1Q96QB1 1528 aa9.85□□□□□ -0.83
HDAC9-218ENST00000456174 SLC12A5Q9H2X9 1139 aa9.85□□□□□ -0.83
HDAC9-218ENST00000456174 MINK1Q8N4C8 1332 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-218ENST00000456174 RGS3P49796 1198 aa9.84□□□□□ -0.83
HDAC9-218ENST00000456174 CABP2Q9NPB3 220 aa9.84□□□□□ -0.83
HDAC9-218ENST00000456174 RIMS1Q86UR5 1692 aaKnown RBP9.84□□□□□ -0.83
HDAC9-218ENST00000456174 KNDC1Q76NI1 1749 aa9.83□□□□□ -0.84
HDAC9-218ENST00000456174 PPP2R1AP30153 589 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms