RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 ORAI2Q96SN7 254 aa18.31■□□□□ 0.52
SMCR2-201ENST00000456090 WAPLQ7Z5K2 1190 aa18.3■□□□□ 0.52
SMCR2-201ENST00000456090 MYOM2P54296 1465 aa18.3■□□□□ 0.52
SMCR2-201ENST00000456090 NRXN1Q9ULB1 1477 aa18.3■□□□□ 0.52
SMCR2-201ENST00000456090 YTHDC2Q9H6S0 1430 aaKnown RBP18.29■□□□□ 0.52
SMCR2-201ENST00000456090 ABCC11Q96J66 1382 aa18.29■□□□□ 0.52
SMCR2-201ENST00000456090 ZNF772Q68DY9 489 aaPredicted RBP18.28■□□□□ 0.52
SMCR2-201ENST00000456090 PNPLA6Q8IY17 1366 aa18.28■□□□□ 0.52
SMCR2-201ENST00000456090 PLEKHH1Q9ULM0 1364 aa18.27■□□□□ 0.51
SMCR2-201ENST00000456090 RGPD8O14715 1765 aaPredicted RBP18.27■□□□□ 0.51
SMCR2-201ENST00000456090 FMN2Q9NZ56 1722 aa18.26■□□□□ 0.51
SMCR2-201ENST00000456090 C14orf93Q9H972 538 aaKnown RBP18.26■□□□□ 0.51
SMCR2-201ENST00000456090 SOS2Q07890 1332 aaPredicted RBP18.25■□□□□ 0.51
SMCR2-201ENST00000456090 ESCO1Q5FWF5 840 aa18.25■□□□□ 0.51
SMCR2-201ENST00000456090 CFAP70Q5T0N1 1121 aa18.24■□□□□ 0.51
SMCR2-201ENST00000456090 NUTM2FA1L443 756 aa18.23■□□□□ 0.51
SMCR2-201ENST00000456090 DHX57Q6P158 1386 aaKnown RBP18.22■□□□□ 0.51
SMCR2-201ENST00000456090 HRCP23327 699 aa18.22■□□□□ 0.51
SMCR2-201ENST00000456090 COL22A1Q8NFW1 1626 aaPredicted RBP18.22■□□□□ 0.51
SMCR2-201ENST00000456090 AFF2P51816 1311 aa18.22■□□□□ 0.51
SMCR2-201ENST00000456090 C8orf37Q96NL8 207 aa18.21■□□□□ 0.51
SMCR2-201ENST00000456090 KIF1AQ12756 1690 aa18.21■□□□□ 0.51
SMCR2-201ENST00000456090 NPHP3Q7Z494 1330 aa18.21■□□□□ 0.51
SMCR2-201ENST00000456090 PXDNQ92626 1479 aa18.2■□□□□ 0.5
SMCR2-201ENST00000456090 MARF1Q9Y4F3 1742 aaKnown RBP18.2■□□□□ 0.5
SMCR2-201ENST00000456090 FOXO3O43524 673 aa18.19■□□□□ 0.5
SMCR2-201ENST00000456090 ADAMTS2O95450 1211 aa18.19■□□□□ 0.5
SMCR2-201ENST00000456090 SIRT1Q96EB6 747 aa18.19■□□□□ 0.5
SMCR2-201ENST00000456090 ADGRB1O14514 1584 aa18.18■□□□□ 0.5
SMCR2-201ENST00000456090 RXRBP28702 533 aa18.18■□□□□ 0.5
SMCR2-201ENST00000456090 XPCQ01831 940 aaPredicted RBP18.18■□□□□ 0.5
SMCR2-201ENST00000456090 KDM2AQ9Y2K7 1162 aa18.18■□□□□ 0.5
SMCR2-201ENST00000456090 SAFB2Q14151 953 aaKnown RBP eCLIP18.17■□□□□ 0.5
SMCR2-201ENST00000456090 DCAF11Q8TEB1 546 aa18.17■□□□□ 0.5
SMCR2-201ENST00000456090 PRAM1Q96QH2 718 aa18.17■□□□□ 0.5
SMCR2-201ENST00000456090 DLC1Q96QB1 1528 aa18.17■□□□□ 0.5
SMCR2-201ENST00000456090 NGLY1Q96IV0 654 aa18.15■□□□□ 0.5
SMCR2-201ENST00000456090 QTRT2Q9H974 415 aaKnown RBP18.13■□□□□ 0.49
SMCR2-201ENST00000456090 POGKQ9P215 609 aa18.13■□□□□ 0.49
SMCR2-201ENST00000456090 CDK12Q9NYV4 1490 aaPredicted RBP18.13■□□□□ 0.49
SMCR2-201ENST00000456090 ADGRB2O60241 1585 aa18.13■□□□□ 0.49
SMCR2-201ENST00000456090 USP32Q8NFA0 1604 aa18.12■□□□□ 0.49
SMCR2-201ENST00000456090 TRAK1Q9UPV9 953 aa18.12■□□□□ 0.49
SMCR2-201ENST00000456090 ARHGEF28Q8N1W1 1705 aaKnown RBP18.12■□□□□ 0.49
SMCR2-201ENST00000456090 STAC3Q96MF2 364 aa18.1■□□□□ 0.49
SMCR2-201ENST00000456090 RBM6P78332 1123 aaKnown RBP18.09■□□□□ 0.49
SMCR2-201ENST00000456090 USP21Q9UK80 565 aa18.09■□□□□ 0.49
SMCR2-201ENST00000456090 PHF8Q9UPP1 1060 aa18.09■□□□□ 0.49
SMCR2-201ENST00000456090 EP400Q96L91 3159 aa18.08■□□□□ 0.49
SMCR2-201ENST00000456090 SPATA31A3Q5VYP0 1347 aa18.08■□□□□ 0.49
SMCR2-201ENST00000456090 KRT28Q7Z3Y7 464 aa18.08■□□□□ 0.48
SMCR2-201ENST00000456090 HIRIP3Q9BW71 556 aaPredicted RBP18.08■□□□□ 0.48
SMCR2-201ENST00000456090 RGS12O14924 1447 aa18.07■□□□□ 0.48
SMCR2-201ENST00000456090 KIAA1210Q9ULL0 1709 aa18.07■□□□□ 0.48
SMCR2-201ENST00000456090 FNBP4Q8N3X1 1017 aaPredicted RBP18.07■□□□□ 0.48
SMCR2-201ENST00000456090 ANKARQ7Z5J8 1434 aa18.06■□□□□ 0.48
SMCR2-201ENST00000456090 MINK1Q8N4C8 1332 aaPredicted RBP18.06■□□□□ 0.48
SMCR2-201ENST00000456090 ABCA3Q99758 1704 aa18.06■□□□□ 0.48
SMCR2-201ENST00000456090 TNS3Q68CZ2 1445 aa18.06■□□□□ 0.48
SMCR2-201ENST00000456090 UPF1Q92900 1129 aaKnown RBP eCLIP18.05■□□□□ 0.48
SMCR2-201ENST00000456090 TRPC5Q9UL62 973 aaPredicted RBP18.05■□□□□ 0.48
SMCR2-201ENST00000456090 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.05■□□□□ 0.48
SMCR2-201ENST00000456090 ITSN1Q15811 1721 aa18.04■□□□□ 0.48
SMCR2-201ENST00000456090 PSME1Q06323 249 aa18.04■□□□□ 0.48
SMCR2-201ENST00000456090 PMFBP1Q8TBY8 1022 aa18.04■□□□□ 0.48
SMCR2-201ENST00000456090 TRPM3Q9HCF6 1732 aaPredicted RBP18.03■□□□□ 0.48
SMCR2-201ENST00000456090 TULP4Q9NRJ4 1543 aa18.03■□□□□ 0.48
SMCR2-201ENST00000456090 ATRNO75882 1429 aa18.03■□□□□ 0.48
SMCR2-201ENST00000456090 BCL9LQ86UU0 1499 aa18.02■□□□□ 0.48
SMCR2-201ENST00000456090 SBNO1A3KN83 1393 aa18.02■□□□□ 0.47
SMCR2-201ENST00000456090 EIF3AQ14152 1382 aaKnown RBP18.02■□□□□ 0.47
SMCR2-201ENST00000456090 WASLO00401 505 aaPredicted RBP18.01■□□□□ 0.47
SMCR2-201ENST00000456090 PLCH1Q4KWH8 1693 aa18■□□□□ 0.47
SMCR2-201ENST00000456090 ALS2Q96Q42 1657 aa18■□□□□ 0.47
SMCR2-201ENST00000456090 PLEKHG5O94827 1062 aa18■□□□□ 0.47
SMCR2-201ENST00000456090 LMOD2Q6P5Q4 547 aa18■□□□□ 0.47
SMCR2-201ENST00000456090 PRR36Q9H6K5 1346 aa17.99■□□□□ 0.47
SMCR2-201ENST00000456090 HAP1P54257 671 aaPredicted RBP17.99■□□□□ 0.47
SMCR2-201ENST00000456090 ARHGEF10O15013 1369 aa17.99■□□□□ 0.47
SMCR2-201ENST00000456090 NWD2Q9ULI1 1742 aa17.98■□□□□ 0.47
SMCR2-201ENST00000456090 CABLES1Q8TDN4 633 aa17.98■□□□□ 0.47
SMCR2-201ENST00000456090 SLIT2O94813 1529 aa17.98■□□□□ 0.47
SMCR2-201ENST00000456090 GPRASP1Q5JY77 1395 aa17.96■□□□□ 0.47
SMCR2-201ENST00000456090 ATP7BP35670 1465 aa17.95■□□□□ 0.46
SMCR2-201ENST00000456090 UNC5CLQ8IV45 518 aa17.95■□□□□ 0.46
SMCR2-201ENST00000456090 TOPAZ1Q8N9V7 1692 aa17.95■□□□□ 0.46
SMCR2-201ENST00000456090 BRWD3Q6RI45 1802 aa17.94■□□□□ 0.46
SMCR2-201ENST00000456090 NBPF1Q3BBV0 1214 aa17.94■□□□□ 0.46
SMCR2-201ENST00000456090 NGDNQ8NEJ9 315 aaKnown RBP17.94■□□□□ 0.46
SMCR2-201ENST00000456090 GJD4Q96KN9 370 aaPredicted RBP17.94■□□□□ 0.46
SMCR2-201ENST00000456090 GLI3P10071 1580 aa17.94■□□□□ 0.46
SMCR2-201ENST00000456090 CRYBG1Q9Y4K1 1723 aa17.94■□□□□ 0.46
SMCR2-201ENST00000456090 ATAD2Q6PL18 1390 aa17.93■□□□□ 0.46
SMCR2-201ENST00000456090 QRICH2Q9H0J4 1663 aa17.93■□□□□ 0.46
SMCR2-201ENST00000456090 NUDT16Q96DE0 195 aaKnown RBP17.92■□□□□ 0.46
SMCR2-201ENST00000456090 RALGAPBQ86X10 1494 aa17.92■□□□□ 0.46
SMCR2-201ENST00000456090 CDK19Q9BWU1 502 aa17.91■□□□□ 0.46
SMCR2-201ENST00000456090 NRAPQ86VF7 1730 aa17.9■□□□□ 0.46
SMCR2-201ENST00000456090 PAK3O75914 559 aaPredicted RBP17.9■□□□□ 0.46
SMCR2-201ENST00000456090 L3MBTL2Q969R5 705 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms