RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 C3P01024 1663 aa16.65■□□□□ 0.26
LINC00473-202ENST00000455853 C8orf34Q49A92 452 aa16.65■□□□□ 0.26
LINC00473-202ENST00000455853 MYOM2P54296 1465 aa16.64■□□□□ 0.25
LINC00473-202ENST00000455853 MYO3AQ8NEV4 1616 aa16.64■□□□□ 0.25
LINC00473-202ENST00000455853 NFKBIBQ15653 356 aa16.64■□□□□ 0.25
LINC00473-202ENST00000455853 CGNL1Q0VF96 1302 aa16.64■□□□□ 0.25
LINC00473-202ENST00000455853 VWDEQ8N2E2 1590 aa16.63■□□□□ 0.25
LINC00473-202ENST00000455853 KANK1Q14678 1352 aa16.62■□□□□ 0.25
LINC00473-202ENST00000455853 PDE3AQ14432 1141 aa16.62■□□□□ 0.25
LINC00473-202ENST00000455853 KIF1BO60333 1816 aa16.61■□□□□ 0.25
LINC00473-202ENST00000455853 PPP6R1Q9UPN7 881 aa16.61■□□□□ 0.25
LINC00473-202ENST00000455853 MAPK8IP3Q9UPT6 1336 aa16.61■□□□□ 0.25
LINC00473-202ENST00000455853 CLTCQ00610 1675 aaKnown RBP16.6■□□□□ 0.25
LINC00473-202ENST00000455853 PREX1Q8TCU6 1659 aa16.6■□□□□ 0.25
LINC00473-202ENST00000455853 IFT172Q9UG01 1749 aa16.6■□□□□ 0.25
LINC00473-202ENST00000455853 SBNO2Q9Y2G9 1366 aa16.6■□□□□ 0.25
LINC00473-202ENST00000455853 POLR3AO14802 1390 aaPredicted RBP16.58■□□□□ 0.25
LINC00473-202ENST00000455853 MROH2AA6NES4 1674 aa16.58■□□□□ 0.24
LINC00473-202ENST00000455853 NPATQ14207 1427 aa16.57■□□□□ 0.24
LINC00473-202ENST00000455853 ERVK-7P63135 1459 aa16.57■□□□□ 0.24
LINC00473-202ENST00000455853 USP32Q8NFA0 1604 aa16.55■□□□□ 0.24
LINC00473-202ENST00000455853 SETBP1Q9Y6X0 1596 aa16.55■□□□□ 0.24
LINC00473-202ENST00000455853 NCBP3Q53F19 620 aaKnown RBP16.55■□□□□ 0.24
LINC00473-202ENST00000455853 FBXO31Q5XUX0 539 aaPredicted RBP16.55■□□□□ 0.24
LINC00473-202ENST00000455853 IL27Q8NEV9 243 aa16.55■□□□□ 0.24
LINC00473-202ENST00000455853 BECN1Q14457 450 aa16.54■□□□□ 0.24
LINC00473-202ENST00000455853 APAF1O14727 1248 aa16.54■□□□□ 0.24
LINC00473-202ENST00000455853 CENPJQ9HC77 1338 aaPredicted RBP16.53■□□□□ 0.24
LINC00473-202ENST00000455853 SKAP1Q86WV1 359 aa16.53■□□□□ 0.24
LINC00473-202ENST00000455853 NRXN1Q9ULB1 1477 aa16.52■□□□□ 0.24
LINC00473-202ENST00000455853 PMFBP1Q8TBY8 1022 aa16.52■□□□□ 0.24
LINC00473-202ENST00000455853 SETD1BQ9UPS6 1966 aaKnown RBP16.52■□□□□ 0.23
LINC00473-202ENST00000455853 RGS3P49796 1198 aa16.52■□□□□ 0.23
LINC00473-202ENST00000455853 CLUAP1Q96AJ1 413 aa16.52■□□□□ 0.23
LINC00473-202ENST00000455853 SHPRHQ149N8 1683 aa16.51■□□□□ 0.23
LINC00473-202ENST00000455853 ILDR1Q86SU0 546 aaPredicted RBP16.51■□□□□ 0.23
LINC00473-202ENST00000455853 ZC3H13Q5T200 1668 aaKnown RBP16.51■□□□□ 0.23
LINC00473-202ENST00000455853 CCDC146Q8IYE0 955 aa16.49■□□□□ 0.23
LINC00473-202ENST00000455853 FRAT1Q92837 279 aaPredicted RBP16.49■□□□□ 0.23
LINC00473-202ENST00000455853 EFCAB6Q5THR3 1501 aa16.49■□□□□ 0.23
LINC00473-202ENST00000455853 LMTK2Q8IWU2 1503 aa16.49■□□□□ 0.23
LINC00473-202ENST00000455853 MROH1Q8NDA8 1641 aa16.48■□□□□ 0.23
LINC00473-202ENST00000455853 CANXP27824 592 aaKnown RBP16.48■□□□□ 0.23
LINC00473-202ENST00000455853 ABCC3O15438 1527 aa16.48■□□□□ 0.23
LINC00473-202ENST00000455853 TNRQ92752 1358 aa16.47■□□□□ 0.23
LINC00473-202ENST00000455853 BCAR3O75815 825 aa16.47■□□□□ 0.23
LINC00473-202ENST00000455853 SLC4A3P48751 1232 aa16.47■□□□□ 0.23
LINC00473-202ENST00000455853 WDR63Q8IWG1 891 aa16.47■□□□□ 0.23
LINC00473-202ENST00000455853 IQSEC2Q5JU85 1478 aa16.47■□□□□ 0.23
LINC00473-202ENST00000455853 UPF2Q9HAU5 1272 aaKnown RBP16.47■□□□□ 0.23
LINC00473-202ENST00000455853 STRCQ7RTU9 1775 aa16.47■□□□□ 0.23
LINC00473-202ENST00000455853 WWC1Q8IX03 1113 aa16.46■□□□□ 0.23
LINC00473-202ENST00000455853 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
LINC00473-202ENST00000455853 CCDC27Q2M243 656 aa16.45■□□□□ 0.22
LINC00473-202ENST00000455853 RUNDC1Q96C34 613 aa16.45■□□□□ 0.22
LINC00473-202ENST00000455853 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
LINC00473-202ENST00000455853 NCKAP5LQ9HCH0 1330 aa16.45■□□□□ 0.22
LINC00473-202ENST00000455853 CAMSAP1Q5T5Y3 1602 aa16.45■□□□□ 0.22
LINC00473-202ENST00000455853 CEP170BQ9Y4F5 1589 aaPredicted RBP16.45■□□□□ 0.22
LINC00473-202ENST00000455853 USP19O94966 1318 aa16.44■□□□□ 0.22
LINC00473-202ENST00000455853 QRICH2Q9H0J4 1663 aa16.44■□□□□ 0.22
LINC00473-202ENST00000455853 IGHDP01880 384 aa16.44■□□□□ 0.22
LINC00473-202ENST00000455853 PUS7Q96PZ0 661 aaKnown RBP16.44■□□□□ 0.22
LINC00473-202ENST00000455853 ADGRB3O60242 1522 aa16.44■□□□□ 0.22
LINC00473-202ENST00000455853 FRAT2O75474 233 aaPredicted RBP16.43■□□□□ 0.22
LINC00473-202ENST00000455853 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
LINC00473-202ENST00000455853 A2ML1A8K2U0 1454 aa16.43■□□□□ 0.22
LINC00473-202ENST00000455853 NLRP1Q9C000 1473 aa16.43■□□□□ 0.22
LINC00473-202ENST00000455853 PPLO60437 1756 aa16.43■□□□□ 0.22
LINC00473-202ENST00000455853 CT47B1P0C2W7 299 aaPredicted RBP16.42■□□□□ 0.22
LINC00473-202ENST00000455853 CARD14Q9BXL6 1004 aa16.42■□□□□ 0.22
LINC00473-202ENST00000455853 NSD2O96028 1365 aa16.42■□□□□ 0.22
LINC00473-202ENST00000455853 CFAP70Q5T0N1 1121 aa16.41■□□□□ 0.22
LINC00473-202ENST00000455853 L1TD1Q5T7N2 865 aaKnown RBP16.41■□□□□ 0.22
LINC00473-202ENST00000455853 FAM43AQ8N2R8 423 aa16.41■□□□□ 0.22
LINC00473-202ENST00000455853 CFAP53Q96M91 514 aa16.41■□□□□ 0.22
LINC00473-202ENST00000455853 RWDD1Q9H446 243 aaPredicted RBP16.41■□□□□ 0.22
LINC00473-202ENST00000455853 ZNF142P52746 1687 aaPredicted RBP16.41■□□□□ 0.22
LINC00473-202ENST00000455853 RARSP54136 660 aaKnown RBP16.4■□□□□ 0.22
LINC00473-202ENST00000455853 BRPF3Q9ULD4 1205 aa16.4■□□□□ 0.22
LINC00473-202ENST00000455853 NSD3Q9BZ95 1437 aa16.4■□□□□ 0.22
LINC00473-202ENST00000455853 MORC1Q86VD1 984 aa16.4■□□□□ 0.22
LINC00473-202ENST00000455853 MYH16Q9H6N6 1097 aa16.39■□□□□ 0.21
LINC00473-202ENST00000455853 COG6Q9Y2V7 657 aa16.39■□□□□ 0.21
LINC00473-202ENST00000455853 ADGRB2O60241 1585 aa16.38■□□□□ 0.21
LINC00473-202ENST00000455853 ADGRF5Q8IZF2 1346 aa16.38■□□□□ 0.21
LINC00473-202ENST00000455853 CERKQ8TCT0 537 aa16.38■□□□□ 0.21
LINC00473-202ENST00000455853 RTN4Q9NQC3 1192 aaKnown RBP16.38■□□□□ 0.21
LINC00473-202ENST00000455853 FBXO41Q8TF61 875 aa16.38■□□□□ 0.21
LINC00473-202ENST00000455853 ANO8Q9HCE9 1232 aaPredicted RBP16.38■□□□□ 0.21
LINC00473-202ENST00000455853 SPATA31D1Q6ZQQ2 1576 aa16.37■□□□□ 0.21
LINC00473-202ENST00000455853 RPGRIP1LQ68CZ1 1315 aa16.37■□□□□ 0.21
LINC00473-202ENST00000455853 PANK1Q8TE04 598 aa16.37■□□□□ 0.21
LINC00473-202ENST00000455853 TBC1D32Q96NH3 1257 aa16.37■□□□□ 0.21
LINC00473-202ENST00000455853 ARHGAP31Q2M1Z3 1444 aa16.36■□□□□ 0.21
LINC00473-202ENST00000455853 UGGT1Q9NYU2 1555 aa16.35■□□□□ 0.21
LINC00473-202ENST00000455853 TCP11L2Q8N4U5 519 aa16.35■□□□□ 0.21
LINC00473-202ENST00000455853 ADGRB1O14514 1584 aa16.34■□□□□ 0.21
LINC00473-202ENST00000455853 THEMISQ8N1K5 641 aaPredicted RBP16.34■□□□□ 0.21
LINC00473-202ENST00000455853 NOS1P29475 1434 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms