RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 TMEM94Q12767 1356 aa15.1■□□□□ 0.01
SYPL1-202ENST00000455385 LRRC7Q96NW7 1537 aa15.09■□□□□ 0.01
SYPL1-202ENST00000455385 C11orf95C9JLR9 678 aaPredicted RBP15.08■□□□□ 0.01
SYPL1-202ENST00000455385 QRICH2Q9H0J4 1663 aa15.08■□□□□ 0
SYPL1-202ENST00000455385 XIRP1Q702N8 1843 aaKnown RBP15.06■□□□□ 0
SYPL1-202ENST00000455385 SBNO2Q9Y2G9 1366 aa15.06■□□□□ 0
SYPL1-202ENST00000455385 DISP3Q9P2K9 1392 aa15.05■□□□□ 0
SYPL1-202ENST00000455385 C14orf37Q86TY3 774 aa15.05■□□□□ -0
SYPL1-202ENST00000455385 CDK19Q9BWU1 502 aa15.04■□□□□ -0
SYPL1-202ENST00000455385 ADGRL3Q9HAR2 1447 aa15.04■□□□□ -0
SYPL1-202ENST00000455385 NCOA3Q9Y6Q9 1424 aa15.04■□□□□ -0
SYPL1-202ENST00000455385 WASLO00401 505 aaPredicted RBP15.04■□□□□ -0
SYPL1-202ENST00000455385 C19orf44Q9H6X5 657 aa15.04■□□□□ -0
SYPL1-202ENST00000455385 NALCNQ8IZF0 1738 aa15.03■□□□□ -0
SYPL1-202ENST00000455385 TULP4Q9NRJ4 1543 aa15.03■□□□□ -0
SYPL1-202ENST00000455385 TMF1P82094 1093 aa15.02■□□□□ -0
SYPL1-202ENST00000455385 EVC2Q86UK5 1308 aa15.02■□□□□ -0
SYPL1-202ENST00000455385 CABP2Q9NPB3 220 aa15.02□□□□□ -0.01
SYPL1-202ENST00000455385 NUTM2FA1L443 756 aa15.01□□□□□ -0.01
SYPL1-202ENST00000455385 SLC24A1O60721 1099 aa15.01□□□□□ -0.01
SYPL1-202ENST00000455385 ADGRB2O60241 1585 aa15.01□□□□□ -0.01
SYPL1-202ENST00000455385 ZNF316A6NFI3 1004 aaPredicted RBP15□□□□□ -0.01
SYPL1-202ENST00000455385 SRPK2P78362 688 aaKnown RBP15□□□□□ -0.01
SYPL1-202ENST00000455385 KIF7Q2M1P5 1343 aa14.99□□□□□ -0.01
SYPL1-202ENST00000455385 WASHC2AQ641Q2 1341 aa14.99□□□□□ -0.01
SYPL1-202ENST00000455385 PRR36Q9H6K5 1346 aa14.99□□□□□ -0.01
SYPL1-202ENST00000455385 MSH6P52701 1360 aa14.99□□□□□ -0.01
SYPL1-202ENST00000455385 CDC42BPGQ6DT37 1551 aa14.97□□□□□ -0.01
SYPL1-202ENST00000455385 ATF3P18847 181 aa14.97□□□□□ -0.01
SYPL1-202ENST00000455385 NUDT16Q96DE0 195 aaKnown RBP14.97□□□□□ -0.01
SYPL1-202ENST00000455385 PUS7Q96PZ0 661 aaKnown RBP14.97□□□□□ -0.01
SYPL1-202ENST00000455385 POLR3GLQ9BT43 218 aa14.97□□□□□ -0.01
SYPL1-202ENST00000455385 CCDC7Q96M83 1385 aa14.96□□□□□ -0.01
SYPL1-202ENST00000455385 CADPS2Q86UW7 1296 aa14.96□□□□□ -0.01
SYPL1-202ENST00000455385 CERKQ8TCT0 537 aa14.96□□□□□ -0.01
SYPL1-202ENST00000455385 CDCA8Q53HL2 280 aa14.95□□□□□ -0.02
SYPL1-202ENST00000455385 DCCP43146 1447 aa14.95□□□□□ -0.02
SYPL1-202ENST00000455385 FMN2Q9NZ56 1722 aa14.95□□□□□ -0.02
SYPL1-202ENST00000455385 USP32Q8NFA0 1604 aa14.95□□□□□ -0.02
SYPL1-202ENST00000455385 RGPD8O14715 1765 aaPredicted RBP14.94□□□□□ -0.02
SYPL1-202ENST00000455385 SLC12A5Q9H2X9 1139 aa14.94□□□□□ -0.02
SYPL1-202ENST00000455385 ATP7BP35670 1465 aa14.94□□□□□ -0.02
SYPL1-202ENST00000455385 MST1RQ04912 1400 aa14.94□□□□□ -0.02
SYPL1-202ENST00000455385 CCDC61Q9Y6R9 512 aa14.94□□□□□ -0.02
SYPL1-202ENST00000455385 ORAI2Q96SN7 254 aa14.93□□□□□ -0.02
SYPL1-202ENST00000455385 CABP1Q9NZU7 370 aa14.93□□□□□ -0.02
SYPL1-202ENST00000455385 SLAIN2Q9P270 581 aa14.93□□□□□ -0.02
SYPL1-202ENST00000455385 C1orf167Q5SNV9 1468 aa14.92□□□□□ -0.02
SYPL1-202ENST00000455385 TMC1Q8TDI8 760 aa14.92□□□□□ -0.02
SYPL1-202ENST00000455385 ANKARQ7Z5J8 1434 aa14.92□□□□□ -0.02
SYPL1-202ENST00000455385 ATAD2Q6PL18 1390 aa14.92□□□□□ -0.02
SYPL1-202ENST00000455385 ESCO1Q5FWF5 840 aa14.91□□□□□ -0.02
SYPL1-202ENST00000455385 PMFBP1Q8TBY8 1022 aa14.9□□□□□ -0.02
SYPL1-202ENST00000455385 PPIP5K1Q6PFW1 1433 aa14.9□□□□□ -0.02
SYPL1-202ENST00000455385 PLEKHG3A1L390 1219 aa14.9□□□□□ -0.02
SYPL1-202ENST00000455385 IQSEC2Q5JU85 1478 aa14.88□□□□□ -0.03
SYPL1-202ENST00000455385 MYOM1P52179 1685 aa14.88□□□□□ -0.03
SYPL1-202ENST00000455385 DDX10Q13206 875 aaKnown RBP14.88□□□□□ -0.03
SYPL1-202ENST00000455385 PHF8Q9UPP1 1060 aa14.88□□□□□ -0.03
SYPL1-202ENST00000455385 TOPAZ1Q8N9V7 1692 aa14.88□□□□□ -0.03
SYPL1-202ENST00000455385 ACEP12821 1306 aa14.87□□□□□ -0.03
SYPL1-202ENST00000455385 CD163L1Q9NR16 1453 aa14.87□□□□□ -0.03
SYPL1-202ENST00000455385 UBAP1LF5GYI3 381 aa14.87□□□□□ -0.03
SYPL1-202ENST00000455385 BRINP3Q76B58 766 aa14.87□□□□□ -0.03
SYPL1-202ENST00000455385 PANK3Q9H999 370 aa14.87□□□□□ -0.03
SYPL1-202ENST00000455385 TOM1O60784 492 aa14.86□□□□□ -0.03
SYPL1-202ENST00000455385 FOXO3O43524 673 aa14.85□□□□□ -0.03
SYPL1-202ENST00000455385 DDX17Q92841 729 aaKnown RBP14.85□□□□□ -0.03
SYPL1-202ENST00000455385 CARD14Q9BXL6 1004 aa14.85□□□□□ -0.03
SYPL1-202ENST00000455385 NINLQ9Y2I6 1382 aa14.85□□□□□ -0.03
SYPL1-202ENST00000455385 ITSN1Q15811 1721 aa14.84□□□□□ -0.03
SYPL1-202ENST00000455385 CPSF1Q10570 1443 aaKnown RBP14.84□□□□□ -0.03
SYPL1-202ENST00000455385 NGDNQ8NEJ9 315 aaKnown RBP14.84□□□□□ -0.03
SYPL1-202ENST00000455385 A0A1W2PP64 1363 aa14.84□□□□□ -0.03
SYPL1-202ENST00000455385 POLR3AO14802 1390 aaPredicted RBP14.84□□□□□ -0.03
SYPL1-202ENST00000455385 PIP4K2BP78356 416 aa14.83□□□□□ -0.04
SYPL1-202ENST00000455385 TERF2IPQ9NYB0 399 aa14.83□□□□□ -0.04
SYPL1-202ENST00000455385 ANKRD36BQ8N2N9 1353 aa14.83□□□□□ -0.04
SYPL1-202ENST00000455385 PER1O15534 1290 aaPredicted RBP14.82□□□□□ -0.04
SYPL1-202ENST00000455385 XPCQ01831 940 aaPredicted RBP14.82□□□□□ -0.04
SYPL1-202ENST00000455385 ZNF692Q9BU19 519 aaPredicted RBP14.82□□□□□ -0.04
SYPL1-202ENST00000455385 HDGFL2Q7Z4V5 671 aaPredicted RBP14.81□□□□□ -0.04
SYPL1-202ENST00000455385 PSME1Q06323 249 aa14.8□□□□□ -0.04
SYPL1-202ENST00000455385 KTN1Q86UP2 1357 aaKnown RBP14.8□□□□□ -0.04
SYPL1-202ENST00000455385 ROBO1Q9Y6N7 1651 aa14.8□□□□□ -0.04
SYPL1-202ENST00000455385 AKAP12Q02952 1782 aa14.8□□□□□ -0.04
SYPL1-202ENST00000455385 KIF1AQ12756 1690 aa14.79□□□□□ -0.04
SYPL1-202ENST00000455385 SCAF1Q9H7N4 1312 aaKnown RBP14.79□□□□□ -0.04
SYPL1-202ENST00000455385 KRT28Q7Z3Y7 464 aa14.79□□□□□ -0.04
SYPL1-202ENST00000455385 USP6P35125 1406 aa14.79□□□□□ -0.04
SYPL1-202ENST00000455385 SSH2Q76I76 1423 aa14.79□□□□□ -0.04
SYPL1-202ENST00000455385 NPHP3Q7Z494 1330 aa14.78□□□□□ -0.04
SYPL1-202ENST00000455385 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.77□□□□□ -0.04
SYPL1-202ENST00000455385 NSD3Q9BZ95 1437 aa14.77□□□□□ -0.05
SYPL1-202ENST00000455385 TTC21BQ7Z4L5 1316 aa14.77□□□□□ -0.05
SYPL1-202ENST00000455385 MON2Q7Z3U7 1717 aa14.77□□□□□ -0.05
SYPL1-202ENST00000455385 SOS2Q07890 1332 aaPredicted RBP14.76□□□□□ -0.05
SYPL1-202ENST00000455385 PXDNQ92626 1479 aa14.76□□□□□ -0.05
SYPL1-202ENST00000455385 KNSTRNQ9Y448 316 aa14.75□□□□□ -0.05
SYPL1-202ENST00000455385 EDC4Q6P2E9 1401 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms