RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 CCNB3Q8WWL7 1395 aa7.64□□□□□ -1.19
HMGB1P4-201ENST00000455362 PPP1R15AO75807 674 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P4-201ENST00000455362 HOXB3P14651 431 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P4-201ENST00000455362 PTGER2P43116 358 aa7.64□□□□□ -1.19
HMGB1P4-201ENST00000455362 C3orf67Q6ZVT6 689 aa7.64□□□□□ -1.19
HMGB1P4-201ENST00000455362 UPF1Q92900 1129 aaKnown RBP eCLIP7.64□□□□□ -1.19
HMGB1P4-201ENST00000455362 ZNF330Q9Y3S2 320 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P4-201ENST00000455362 ZCCHC11Q5TAX3 1644 aaKnown RBP7.63□□□□□ -1.19
HMGB1P4-201ENST00000455362 CYB5RLQ6IPT4 315 aa7.63□□□□□ -1.19
HMGB1P4-201ENST00000455362 MYOM3Q5VTT5 1437 aa7.62□□□□□ -1.19
HMGB1P4-201ENST00000455362 DDX12PQ92771 950 aa7.62□□□□□ -1.19
HMGB1P4-201ENST00000455362 FGD6Q6ZV73 1430 aa7.61□□□□□ -1.19
HMGB1P4-201ENST00000455362 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.61□□□□□ -1.19
HMGB1P4-201ENST00000455362 KIF14Q15058 1648 aa7.61□□□□□ -1.19
HMGB1P4-201ENST00000455362 FAM50AQ14320 339 aaKnown RBP7.61□□□□□ -1.19
HMGB1P4-201ENST00000455362 SKIV2LQ15477 1246 aaKnown RBP7.61□□□□□ -1.19
HMGB1P4-201ENST00000455362 KCNH8Q96L42 1107 aa7.61□□□□□ -1.19
HMGB1P4-201ENST00000455362 SPDYE5A6NIY4 337 aa7.6□□□□□ -1.19
HMGB1P4-201ENST00000455362 HSP90B1P14625 803 aaKnown RBP7.6□□□□□ -1.19
HMGB1P4-201ENST00000455362 MYT1LQ9UL68 1186 aa7.6□□□□□ -1.19
HMGB1P4-201ENST00000455362 COG6Q9Y2V7 657 aa7.6□□□□□ -1.19
HMGB1P4-201ENST00000455362 GPATCH8Q9UKJ3 1502 aaKnown RBP7.6□□□□□ -1.19
HMGB1P4-201ENST00000455362 ABCC10Q5T3U5 1492 aa7.6□□□□□ -1.19
HMGB1P4-201ENST00000455362 MIA2Q96PC5 1412 aa7.6□□□□□ -1.19
HMGB1P4-201ENST00000455362 CDK11BP21127 795 aaKnown RBP7.59□□□□□ -1.19
HMGB1P4-201ENST00000455362 FECHP22830 423 aa7.59□□□□□ -1.19
HMGB1P4-201ENST00000455362 CLCN1P35523 988 aa7.59□□□□□ -1.19
HMGB1P4-201ENST00000455362 PTGDRQ13258 359 aa7.59□□□□□ -1.19
HMGB1P4-201ENST00000455362 WWC1Q8IX03 1113 aa7.59□□□□□ -1.19
HMGB1P4-201ENST00000455362 OXER1Q8TDS5 423 aa7.59□□□□□ -1.19
HMGB1P4-201ENST00000455362 CFDP1Q9UEE9 299 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P4-201ENST00000455362 EVI5O60447 810 aa7.58□□□□□ -1.2
HMGB1P4-201ENST00000455362 ITGAEP38570 1179 aa7.58□□□□□ -1.2
HMGB1P4-201ENST00000455362 KCNA1Q09470 495 aa7.58□□□□□ -1.2
HMGB1P4-201ENST00000455362 PTPN23Q9H3S7 1636 aa7.58□□□□□ -1.2
HMGB1P4-201ENST00000455362 ASXL2Q76L83 1435 aa7.58□□□□□ -1.2
HMGB1P4-201ENST00000455362 CDC42BPAQ5VT25 1732 aa7.58□□□□□ -1.2
HMGB1P4-201ENST00000455362 ZNF644Q9H582 1327 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P4-201ENST00000455362 TCOF1Q13428 1488 aaKnown RBP7.57□□□□□ -1.2
HMGB1P4-201ENST00000455362 WDR7Q9Y4E6 1490 aa7.57□□□□□ -1.2
HMGB1P4-201ENST00000455362 USP35Q9P2H5 1018 aa7.57□□□□□ -1.2
HMGB1P4-201ENST00000455362 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.57□□□□□ -1.2
HMGB1P4-201ENST00000455362 ITSN2Q9NZM3 1697 aa7.57□□□□□ -1.2
HMGB1P4-201ENST00000455362 MYT1Q01538 1121 aa7.56□□□□□ -1.2
HMGB1P4-201ENST00000455362 CALR3Q96L12 384 aaKnown RBP7.56□□□□□ -1.2
HMGB1P4-201ENST00000455362 CDC42BPBQ9Y5S2 1711 aa7.55□□□□□ -1.2
HMGB1P4-201ENST00000455362 TTC37Q6PGP7 1564 aa7.55□□□□□ -1.2
HMGB1P4-201ENST00000455362 SLC34A2O95436 690 aa7.55□□□□□ -1.2
HMGB1P4-201ENST00000455362 PROCA1Q8NCQ7 364 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P4-201ENST00000455362 REPIN1Q9BWE0 567 aaKnown RBP7.55□□□□□ -1.2
HMGB1P4-201ENST00000455362 GPCPD1Q9NPB8 672 aa7.55□□□□□ -1.2
HMGB1P4-201ENST00000455362 PTPRKQ15262 1439 aa7.54□□□□□ -1.2
HMGB1P4-201ENST00000455362 KDM4FA0A1W2PPD8 638 aa7.54□□□□□ -1.2
HMGB1P4-201ENST00000455362 ST18O60284 1047 aa7.54□□□□□ -1.2
HMGB1P4-201ENST00000455362 BRD1O95696 1058 aa7.54□□□□□ -1.2
HMGB1P4-201ENST00000455362 EPAS1Q99814 870 aa7.54□□□□□ -1.2
HMGB1P4-201ENST00000455362 POLR3EQ9NVU0 708 aa7.54□□□□□ -1.2
HMGB1P4-201ENST00000455362 AMOTL2Q9Y2J4 779 aa7.54□□□□□ -1.2
HMGB1P4-201ENST00000455362 MYO5CQ9NQX4 1742 aa7.54□□□□□ -1.2
HMGB1P4-201ENST00000455362 PLCH2O75038 1416 aa7.53□□□□□ -1.2
HMGB1P4-201ENST00000455362 PREX2Q70Z35 1606 aa7.53□□□□□ -1.2
HMGB1P4-201ENST00000455362 CCDC27Q2M243 656 aa7.53□□□□□ -1.2
HMGB1P4-201ENST00000455362 EFCAB2Q5VUJ9 269 aa7.53□□□□□ -1.2
HMGB1P4-201ENST00000455362 GPR153Q6NV75 609 aa7.53□□□□□ -1.2
HMGB1P4-201ENST00000455362 BANK1Q8NDB2 785 aa7.53□□□□□ -1.2
HMGB1P4-201ENST00000455362 CAMSAP2Q08AD1 1489 aa7.53□□□□□ -1.2
HMGB1P4-201ENST00000455362 MAPKBP1O60336 1514 aa7.52□□□□□ -1.2
HMGB1P4-201ENST00000455362 ABCA9Q8IUA7 1624 aa7.52□□□□□ -1.2
HMGB1P4-201ENST00000455362 SSTR3P32745 418 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P4-201ENST00000455362 HNRNPMP52272 730 aaKnown RBP eCLIP7.52□□□□□ -1.21
HMGB1P4-201ENST00000455362 ABCC5O15440 1437 aa7.52□□□□□ -1.21
HMGB1P4-201ENST00000455362 MAP3K7O43318 606 aa7.51□□□□□ -1.21
HMGB1P4-201ENST00000455362 CSB-PGBD3P0DP91 1061 aa7.51□□□□□ -1.21
HMGB1P4-201ENST00000455362 MDM2Q00987 491 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P4-201ENST00000455362 PUS7Q96PZ0 661 aaKnown RBP7.51□□□□□ -1.21
HMGB1P4-201ENST00000455362 BEGAINQ9BUH8 593 aa7.51□□□□□ -1.21
HMGB1P4-201ENST00000455362 SNRKQ9NRH2 765 aa7.51□□□□□ -1.21
HMGB1P4-201ENST00000455362 CHIC2Q9UKJ5 165 aa7.51□□□□□ -1.21
HMGB1P4-201ENST00000455362 ARHGAP5Q13017 1502 aa7.51□□□□□ -1.21
HMGB1P4-201ENST00000455362 ARAP3Q8WWN8 1544 aa7.51□□□□□ -1.21
HMGB1P4-201ENST00000455362 DAPK1P53355 1430 aa7.51□□□□□ -1.21
HMGB1P4-201ENST00000455362 SETD5Q9C0A6 1442 aa7.51□□□□□ -1.21
HMGB1P4-201ENST00000455362 SAMD9LQ8IVG5 1584 aa7.5□□□□□ -1.21
HMGB1P4-201ENST00000455362 DNMT1P26358 1616 aaKnown RBP7.5□□□□□ -1.21
HMGB1P4-201ENST00000455362 PHF14O94880 888 aa7.5□□□□□ -1.21
HMGB1P4-201ENST00000455362 EN1Q05925 392 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P4-201ENST00000455362 RSPH4AQ5TD94 716 aa7.5□□□□□ -1.21
HMGB1P4-201ENST00000455362 PTCD2Q8WV60 388 aaKnown RBP7.5□□□□□ -1.21
HMGB1P4-201ENST00000455362 FAM163AQ96GL9 167 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P4-201ENST00000455362 PRM3Q9NNZ6 103 aa7.5□□□□□ -1.21
HMGB1P4-201ENST00000455362 USTQ9Y2C2 406 aa7.5□□□□□ -1.21
HMGB1P4-201ENST00000455362 KIAA1107Q9UPP5 1409 aa7.5□□□□□ -1.21
HMGB1P4-201ENST00000455362 MBD5Q9P267 1494 aa7.49□□□□□ -1.21
HMGB1P4-201ENST00000455362 SNPHO15079 494 aa7.49□□□□□ -1.21
HMGB1P4-201ENST00000455362 OATP04181 439 aa7.49□□□□□ -1.21
HMGB1P4-201ENST00000455362 GLMNQ92990 594 aa7.49□□□□□ -1.21
HMGB1P4-201ENST00000455362 PBXIP1Q96AQ6 731 aa7.49□□□□□ -1.21
HMGB1P4-201ENST00000455362 TMUB1Q9BVT8 246 aa7.49□□□□□ -1.21
HMGB1P4-201ENST00000455362 CD109Q6YHK3 1445 aa7.49□□□□□ -1.21
HMGB1P4-201ENST00000455362 AKNAQ7Z591 1439 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms