RNA–Protein interactions for RNA: ENST00000455009.5

ARPC1B-212, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-212ENST00000455009 PLEKHH1Q9ULM0 1364 aa28.94■■■□□ 2.22
ARPC1B-212ENST00000455009 PHLPP1O60346 1717 aa28.94■■■□□ 2.22
ARPC1B-212ENST00000455009 C1orf167Q5SNV9 1468 aa28.93■■■□□ 2.22
ARPC1B-212ENST00000455009 BRINP3Q76B58 766 aa28.93■■■□□ 2.22
ARPC1B-212ENST00000455009 PRAM1Q96QH2 718 aa28.93■■■□□ 2.22
ARPC1B-212ENST00000455009 TRAK1Q9UPV9 953 aa28.93■■■□□ 2.22
ARPC1B-212ENST00000455009 AHDC1Q5TGY3 1603 aaPredicted RBP28.92■■■□□ 2.22
ARPC1B-212ENST00000455009 CLSPNQ9HAW4 1339 aa28.86■■■□□ 2.21
ARPC1B-212ENST00000455009 ADGRB2O60241 1585 aa28.85■■■□□ 2.21
ARPC1B-212ENST00000455009 ARHGEF28Q8N1W1 1705 aaKnown RBP28.85■■■□□ 2.21
ARPC1B-212ENST00000455009 COL16A1Q07092 1604 aaPredicted RBP28.84■■■□□ 2.21
ARPC1B-212ENST00000455009 NHSL1Q5SYE7 1610 aa28.84■■■□□ 2.21
ARPC1B-212ENST00000455009 FMN2Q9NZ56 1722 aa28.84■■■□□ 2.21
ARPC1B-212ENST00000455009 SAFB2Q14151 953 aaKnown RBP eCLIP28.84■■■□□ 2.21
ARPC1B-212ENST00000455009 EIF3AQ14152 1382 aaKnown RBP28.83■■■□□ 2.21
ARPC1B-212ENST00000455009 TRPM1Q7Z4N2 1603 aa28.83■■■□□ 2.21
ARPC1B-212ENST00000455009 JCADQ9P266 1359 aa28.82■■■□□ 2.2
ARPC1B-212ENST00000455009 NBPF1Q3BBV0 1214 aa28.81■■■□□ 2.2
ARPC1B-212ENST00000455009 ESCO1Q5FWF5 840 aa28.79■■■□□ 2.2
ARPC1B-212ENST00000455009 ROCK2O75116 1388 aaKnown RBP28.78■■■□□ 2.2
ARPC1B-212ENST00000455009 MED1Q15648 1581 aaPredicted RBP28.78■■■□□ 2.2
ARPC1B-212ENST00000455009 ORAI2Q96SN7 254 aa28.77■■■□□ 2.2
ARPC1B-212ENST00000455009 ANKARQ7Z5J8 1434 aa28.77■■■□□ 2.2
ARPC1B-212ENST00000455009 DISP3Q9P2K9 1392 aa28.76■■■□□ 2.2
ARPC1B-212ENST00000455009 MINK1Q8N4C8 1332 aaPredicted RBP28.76■■■□□ 2.19
ARPC1B-212ENST00000455009 KIF1AQ12756 1690 aa28.76■■■□□ 2.19
ARPC1B-212ENST00000455009 NPHP3Q7Z494 1330 aa28.74■■■□□ 2.19
ARPC1B-212ENST00000455009 NUTM2FA1L443 756 aa28.74■■■□□ 2.19
ARPC1B-212ENST00000455009 LRRC59Q96AG4 307 aaKnown RBP28.74■■■□□ 2.19
ARPC1B-212ENST00000455009 HIRIP3Q9BW71 556 aaPredicted RBP28.72■■■□□ 2.19
ARPC1B-212ENST00000455009 SHPRHQ149N8 1683 aa28.72■■■□□ 2.19
ARPC1B-212ENST00000455009 WASLO00401 505 aaPredicted RBP28.71■■■□□ 2.19
ARPC1B-212ENST00000455009 TIMELESSQ9UNS1 1208 aa28.71■■■□□ 2.19
ARPC1B-212ENST00000455009 SPATA31A6Q5VVP1 1343 aa28.7■■■□□ 2.19
ARPC1B-212ENST00000455009 CENPJQ9HC77 1338 aaPredicted RBP28.7■■■□□ 2.19
ARPC1B-212ENST00000455009 TULP4Q9NRJ4 1543 aa28.7■■■□□ 2.19
ARPC1B-212ENST00000455009 GPRASP1Q5JY77 1395 aa28.69■■■□□ 2.18
ARPC1B-212ENST00000455009 RALGAPBQ86X10 1494 aa28.69■■■□□ 2.18
ARPC1B-212ENST00000455009 NBPF8Q3BBV2 869 aa28.68■■■□□ 2.18
ARPC1B-212ENST00000455009 CCER1Q8TC90 406 aaPredicted RBP28.68■■■□□ 2.18
ARPC1B-212ENST00000455009 SOS2Q07890 1332 aaPredicted RBP28.68■■■□□ 2.18
ARPC1B-212ENST00000455009 DDX17Q92841 729 aaKnown RBP28.66■■■□□ 2.18
ARPC1B-212ENST00000455009 PHF23Q9BUL5 403 aaPredicted RBP28.66■■■□□ 2.18
ARPC1B-212ENST00000455009 PHF8Q9UPP1 1060 aa28.66■■■□□ 2.18
ARPC1B-212ENST00000455009 QRICH2Q9H0J4 1663 aa28.64■■■□□ 2.18
ARPC1B-212ENST00000455009 FOXO3O43524 673 aa28.64■■■□□ 2.18
ARPC1B-212ENST00000455009 RGPD8O14715 1765 aaPredicted RBP28.63■■■□□ 2.17
ARPC1B-212ENST00000455009 USP32Q8NFA0 1604 aa28.63■■■□□ 2.17
ARPC1B-212ENST00000455009 CARD11Q9BXL7 1154 aa28.63■■■□□ 2.17
ARPC1B-212ENST00000455009 PXDNQ92626 1479 aa28.62■■■□□ 2.17
ARPC1B-212ENST00000455009 ITSN1Q15811 1721 aa28.62■■■□□ 2.17
ARPC1B-212ENST00000455009 PNPLA6Q8IY17 1366 aa28.6■■■□□ 2.17
ARPC1B-212ENST00000455009 PSME1Q06323 249 aa28.59■■■□□ 2.17
ARPC1B-212ENST00000455009 CDK19Q9BWU1 502 aa28.59■■■□□ 2.17
ARPC1B-212ENST00000455009 ATP7BP35670 1465 aa28.57■■■□□ 2.16
ARPC1B-212ENST00000455009 NUDT16Q96DE0 195 aaKnown RBP28.56■■■□□ 2.16
ARPC1B-212ENST00000455009 PRR36Q9H6K5 1346 aa28.55■■■□□ 2.16
ARPC1B-212ENST00000455009 MEX3CQ5U5Q3 659 aaKnown RBP28.55■■■□□ 2.16
ARPC1B-212ENST00000455009 EVC2Q86UK5 1308 aa28.54■■■□□ 2.16
ARPC1B-212ENST00000455009 SRPK2P78362 688 aaKnown RBP28.54■■■□□ 2.16
ARPC1B-212ENST00000455009 KRT28Q7Z3Y7 464 aa28.54■■■□□ 2.16
ARPC1B-212ENST00000455009 XPCQ01831 940 aaPredicted RBP28.53■■■□□ 2.16
ARPC1B-212ENST00000455009 PMFBP1Q8TBY8 1022 aa28.53■■■□□ 2.16
ARPC1B-212ENST00000455009 COL22A1Q8NFW1 1626 aaPredicted RBP28.53■■■□□ 2.16
ARPC1B-212ENST00000455009 CCDC61Q9Y6R9 512 aa28.52■■■□□ 2.16
ARPC1B-212ENST00000455009 SBNO1A3KN83 1393 aa28.51■■■□□ 2.16
ARPC1B-212ENST00000455009 SBNO2Q9Y2G9 1366 aa28.51■■■□□ 2.16
ARPC1B-212ENST00000455009 NGDNQ8NEJ9 315 aaKnown RBP28.51■■■□□ 2.15
ARPC1B-212ENST00000455009 TOPAZ1Q8N9V7 1692 aa28.51■■■□□ 2.15
ARPC1B-212ENST00000455009 LRP6O75581 1613 aa28.51■■■□□ 2.15
ARPC1B-212ENST00000455009 NUTM2BA6NNL0 878 aaPredicted RBP28.5■■■□□ 2.15
ARPC1B-212ENST00000455009 NUTM2EB1AL46 878 aaPredicted RBP28.5■■■□□ 2.15
ARPC1B-212ENST00000455009 NUTM2AQ8IVF1 878 aaPredicted RBP28.5■■■□□ 2.15
ARPC1B-212ENST00000455009 TNS3Q68CZ2 1445 aa28.49■■■□□ 2.15
ARPC1B-212ENST00000455009 SPATA31A3Q5VYP0 1347 aa28.48■■■□□ 2.15
ARPC1B-212ENST00000455009 ARHGEF10O15013 1369 aa28.47■■■□□ 2.15
ARPC1B-212ENST00000455009 SLC24A1O60721 1099 aa28.46■■■□□ 2.15
ARPC1B-212ENST00000455009 CABP2Q9NPB3 220 aa28.44■■■□□ 2.14
ARPC1B-212ENST00000455009 PPIP5K1Q6PFW1 1433 aa28.43■■■□□ 2.14
ARPC1B-212ENST00000455009 POLR3AO14802 1390 aaPredicted RBP28.43■■■□□ 2.14
ARPC1B-212ENST00000455009 PLEKHG3A1L390 1219 aa28.43■■■□□ 2.14
ARPC1B-212ENST00000455009 ATAD2Q6PL18 1390 aa28.4■■■□□ 2.14
ARPC1B-212ENST00000455009 TRPM3Q9HCF6 1732 aaPredicted RBP28.4■■■□□ 2.14
ARPC1B-212ENST00000455009 ZNF772Q68DY9 489 aaPredicted RBP28.39■■■□□ 2.14
ARPC1B-212ENST00000455009 LMOD2Q6P5Q4 547 aa28.39■■■□□ 2.14
ARPC1B-212ENST00000455009 ACEP12821 1306 aa28.39■■■□□ 2.13
ARPC1B-212ENST00000455009 PAK3O75914 559 aaPredicted RBP28.36■■■□□ 2.13
ARPC1B-212ENST00000455009 ADAMTS2O95450 1211 aa28.36■■■□□ 2.13
ARPC1B-212ENST00000455009 HAP1P54257 671 aaPredicted RBP28.36■■■□□ 2.13
ARPC1B-212ENST00000455009 C8orf37Q96NL8 207 aa28.36■■■□□ 2.13
ARPC1B-212ENST00000455009 BRD4O60885 1362 aaPredicted RBP28.36■■■□□ 2.13
ARPC1B-212ENST00000455009 USP47Q96K76 1375 aa28.36■■■□□ 2.13
ARPC1B-212ENST00000455009 RGS17Q9UGC6 210 aaPredicted RBP28.35■■■□□ 2.13
ARPC1B-212ENST00000455009 ALS2Q96Q42 1657 aa28.35■■■□□ 2.13
ARPC1B-212ENST00000455009 ST20-MTHFSA0A0A6YYL1 179 aa28.33■■■□□ 2.13
ARPC1B-212ENST00000455009 CABP1Q9NZU7 370 aa28.33■■■□□ 2.13
ARPC1B-212ENST00000455009 NGLY1Q96IV0 654 aa28.32■■■□□ 2.12
ARPC1B-212ENST00000455009 PUS7Q96PZ0 661 aaKnown RBP28.32■■■□□ 2.12
ARPC1B-212ENST00000455009 ILDR2Q71H61 639 aa28.31■■■□□ 2.12
ARPC1B-212ENST00000455009 AFF2P51816 1311 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms