RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 RALGAPBQ86X10 1494 aa13.39□□□□□ -0.27
ATXN3-205ENST00000454964 STRCP1A6NGW2 1772 aa13.39□□□□□ -0.27
ATXN3-205ENST00000454964 DCCP43146 1447 aa13.39□□□□□ -0.27
ATXN3-205ENST00000454964 PTPRUQ92729 1446 aa13.39□□□□□ -0.27
ATXN3-205ENST00000454964 ADGRB1O14514 1584 aa13.38□□□□□ -0.27
ATXN3-205ENST00000454964 NBPF8Q3BBV2 869 aa13.38□□□□□ -0.27
ATXN3-205ENST00000454964 NBPF1Q3BBV0 1214 aa13.37□□□□□ -0.27
ATXN3-205ENST00000454964 PRAM1Q96QH2 718 aa13.36□□□□□ -0.27
ATXN3-205ENST00000454964 CENPJQ9HC77 1338 aaPredicted RBP13.36□□□□□ -0.27
ATXN3-205ENST00000454964 CDCA8Q53HL2 280 aa13.35□□□□□ -0.27
ATXN3-205ENST00000454964 ROBO2Q9HCK4 1378 aa13.34□□□□□ -0.27
ATXN3-205ENST00000454964 ADGRL3Q9HAR2 1447 aa13.34□□□□□ -0.27
ATXN3-205ENST00000454964 PUS7Q96PZ0 661 aaKnown RBP13.34□□□□□ -0.27
ATXN3-205ENST00000454964 SBNO2Q9Y2G9 1366 aa13.32□□□□□ -0.28
ATXN3-205ENST00000454964 XIRP1Q702N8 1843 aaKnown RBP13.32□□□□□ -0.28
ATXN3-205ENST00000454964 UBAP1LF5GYI3 381 aa13.32□□□□□ -0.28
ATXN3-205ENST00000454964 EIF4G2P78344 907 aaKnown RBP eCLIP13.32□□□□□ -0.28
ATXN3-205ENST00000454964 WAPLQ7Z5K2 1190 aa13.32□□□□□ -0.28
ATXN3-205ENST00000454964 SLAIN2Q9P270 581 aa13.32□□□□□ -0.28
ATXN3-205ENST00000454964 ARHGEF28Q8N1W1 1705 aaKnown RBP13.32□□□□□ -0.28
ATXN3-205ENST00000454964 ASXL1Q8IXJ9 1541 aa13.32□□□□□ -0.28
ATXN3-205ENST00000454964 EVC2Q86UK5 1308 aa13.32□□□□□ -0.28
ATXN3-205ENST00000454964 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.31□□□□□ -0.28
ATXN3-205ENST00000454964 FBXO41Q8TF61 875 aa13.3□□□□□ -0.28
ATXN3-205ENST00000454964 RNF216Q9NWF9 866 aaPredicted RBP13.3□□□□□ -0.28
ATXN3-205ENST00000454964 WASLO00401 505 aaPredicted RBP13.29□□□□□ -0.28
ATXN3-205ENST00000454964 CDC42BPGQ6DT37 1551 aa13.28□□□□□ -0.28
ATXN3-205ENST00000454964 TMF1P82094 1093 aa13.28□□□□□ -0.28
ATXN3-205ENST00000454964 ADGRB2O60241 1585 aa13.28□□□□□ -0.28
ATXN3-205ENST00000454964 ANKARQ7Z5J8 1434 aa13.27□□□□□ -0.29
ATXN3-205ENST00000454964 ST20-MTHFSA0A0A6YYL1 179 aa13.26□□□□□ -0.29
ATXN3-205ENST00000454964 HOXD11P31277 338 aaPredicted RBP13.26□□□□□ -0.29
ATXN3-205ENST00000454964 SAFB2Q14151 953 aaKnown RBP eCLIP13.26□□□□□ -0.29
ATXN3-205ENST00000454964 NALCNQ8IZF0 1738 aa13.26□□□□□ -0.29
ATXN3-205ENST00000454964 MINK1Q8N4C8 1332 aaPredicted RBP13.26□□□□□ -0.29
ATXN3-205ENST00000454964 USP47Q96K76 1375 aa13.26□□□□□ -0.29
ATXN3-205ENST00000454964 QRICH2Q9H0J4 1663 aa13.26□□□□□ -0.29
ATXN3-205ENST00000454964 CCDC61Q9Y6R9 512 aa13.26□□□□□ -0.29
ATXN3-205ENST00000454964 RBM33Q96EV2 1170 aaKnown RBP13.25□□□□□ -0.29
ATXN3-205ENST00000454964 CDK19Q9BWU1 502 aa13.25□□□□□ -0.29
ATXN3-205ENST00000454964 ATAD2Q6PL18 1390 aa13.24□□□□□ -0.29
ATXN3-205ENST00000454964 SRPK2P78362 688 aaKnown RBP13.24□□□□□ -0.29
ATXN3-205ENST00000454964 PLEKHH1Q9ULM0 1364 aa13.23□□□□□ -0.29
ATXN3-205ENST00000454964 ITSN1Q15811 1721 aa13.23□□□□□ -0.29
ATXN3-205ENST00000454964 FMN2Q9NZ56 1722 aa13.23□□□□□ -0.29
ATXN3-205ENST00000454964 PSME1Q06323 249 aa13.23□□□□□ -0.29
ATXN3-205ENST00000454964 ZNF692Q9BU19 519 aaPredicted RBP13.23□□□□□ -0.29
ATXN3-205ENST00000454964 NINLQ9Y2I6 1382 aa13.22□□□□□ -0.29
ATXN3-205ENST00000454964 ESCO1Q5FWF5 840 aa13.22□□□□□ -0.29
ATXN3-205ENST00000454964 NUDT16Q96DE0 195 aaKnown RBP13.22□□□□□ -0.29
ATXN3-205ENST00000454964 C1orf167Q5SNV9 1468 aa13.22□□□□□ -0.29
ATXN3-205ENST00000454964 MST1RQ04912 1400 aa13.22□□□□□ -0.29
ATXN3-205ENST00000454964 BRD4O60885 1362 aaPredicted RBP13.21□□□□□ -0.29
ATXN3-205ENST00000454964 NPHP3Q7Z494 1330 aa13.21□□□□□ -0.29
ATXN3-205ENST00000454964 HIRIP3Q9BW71 556 aaPredicted RBP13.21□□□□□ -0.29
ATXN3-205ENST00000454964 TULP4Q9NRJ4 1543 aa13.21□□□□□ -0.29
ATXN3-205ENST00000454964 PLEKHG3A1L390 1219 aa13.2□□□□□ -0.3
ATXN3-205ENST00000454964 PIP4K2BP78356 416 aa13.2□□□□□ -0.3
ATXN3-205ENST00000454964 PHF8Q9UPP1 1060 aa13.2□□□□□ -0.3
ATXN3-205ENST00000454964 KIF1AQ12756 1690 aa13.2□□□□□ -0.3
ATXN3-205ENST00000454964 LRRC59Q96AG4 307 aaKnown RBP13.19□□□□□ -0.3
ATXN3-205ENST00000454964 TESK2Q96S53 571 aa13.19□□□□□ -0.3
ATXN3-205ENST00000454964 HSPA5P11021 654 aaKnown RBP13.18□□□□□ -0.3
ATXN3-205ENST00000454964 BRINP3Q76B58 766 aa13.18□□□□□ -0.3
ATXN3-205ENST00000454964 NGDNQ8NEJ9 315 aaKnown RBP13.18□□□□□ -0.3
ATXN3-205ENST00000454964 TERF2IPQ9NYB0 399 aa13.18□□□□□ -0.3
ATXN3-205ENST00000454964 RGPD8O14715 1765 aaPredicted RBP13.17□□□□□ -0.3
ATXN3-205ENST00000454964 ROBO1Q9Y6N7 1651 aa13.16□□□□□ -0.3
ATXN3-205ENST00000454964 HDGFL2Q7Z4V5 671 aaPredicted RBP13.16□□□□□ -0.3
ATXN3-205ENST00000454964 CABP2Q9NPB3 220 aa13.15□□□□□ -0.3
ATXN3-205ENST00000454964 ORAI2Q96SN7 254 aa13.14□□□□□ -0.31
ATXN3-205ENST00000454964 NUTM2FA1L443 756 aa13.13□□□□□ -0.31
ATXN3-205ENST00000454964 FOXO3O43524 673 aa13.13□□□□□ -0.31
ATXN3-205ENST00000454964 KRT28Q7Z3Y7 464 aa13.13□□□□□ -0.31
ATXN3-205ENST00000454964 AHDC1Q5TGY3 1603 aaPredicted RBP13.13□□□□□ -0.31
ATXN3-205ENST00000454964 PPIP5K1Q6PFW1 1433 aa13.13□□□□□ -0.31
ATXN3-205ENST00000454964 SOS2Q07890 1332 aaPredicted RBP13.13□□□□□ -0.31
ATXN3-205ENST00000454964 ATP7BP35670 1465 aa13.12□□□□□ -0.31
ATXN3-205ENST00000454964 SBNO1A3KN83 1393 aa13.12□□□□□ -0.31
ATXN3-205ENST00000454964 POLR3AO14802 1390 aaPredicted RBP13.12□□□□□ -0.31
ATXN3-205ENST00000454964 TMC1Q8TDI8 760 aa13.12□□□□□ -0.31
ATXN3-205ENST00000454964 CABP1Q9NZU7 370 aa13.12□□□□□ -0.31
ATXN3-205ENST00000454964 PHLPP1O60346 1717 aa13.12□□□□□ -0.31
ATXN3-205ENST00000454964 NHSL1Q5SYE7 1610 aa13.12□□□□□ -0.31
ATXN3-205ENST00000454964 ACEP12821 1306 aa13.11□□□□□ -0.31
ATXN3-205ENST00000454964 PRR36Q9H6K5 1346 aa13.11□□□□□ -0.31
ATXN3-205ENST00000454964 USP32Q8NFA0 1604 aa13.1□□□□□ -0.31
ATXN3-205ENST00000454964 ARHGEF10O15013 1369 aa13.1□□□□□ -0.31
ATXN3-205ENST00000454964 PMFBP1Q8TBY8 1022 aa13.1□□□□□ -0.31
ATXN3-205ENST00000454964 TTC21AQ8NDW8 1320 aa13.1□□□□□ -0.31
ATXN3-205ENST00000454964 JCADQ9P266 1359 aa13.09□□□□□ -0.31
ATXN3-205ENST00000454964 TOPAZ1Q8N9V7 1692 aa13.09□□□□□ -0.31
ATXN3-205ENST00000454964 SPATA31A6Q5VVP1 1343 aa13.09□□□□□ -0.31
ATXN3-205ENST00000454964 HSPA1LP34931 641 aa13.07□□□□□ -0.32
ATXN3-205ENST00000454964 NLRP13Q86W25 1043 aa13.07□□□□□ -0.32
ATXN3-205ENST00000454964 KTN1Q86UP2 1357 aaKnown RBP13.07□□□□□ -0.32
ATXN3-205ENST00000454964 DISP3Q9P2K9 1392 aa13.07□□□□□ -0.32
ATXN3-205ENST00000454964 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
ATXN3-205ENST00000454964 SLC12A5Q9H2X9 1139 aa13.06□□□□□ -0.32
ATXN3-205ENST00000454964 SPATA31A3Q5VYP0 1347 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms