RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 PPARGC1BQ86YN6 1023 aaKnown RBP12.08□□□□□ -0.48
NIF3L1-209ENST00000454952 LAMC1P11047 1609 aa12.08□□□□□ -0.48
NIF3L1-209ENST00000454952 HFM1A2PYH4 1435 aa12.07□□□□□ -0.48
NIF3L1-209ENST00000454952 UPF1Q92900 1129 aaKnown RBP eCLIP12.07□□□□□ -0.48
NIF3L1-209ENST00000454952 C1orf167Q5SNV9 1468 aa12.07□□□□□ -0.48
NIF3L1-209ENST00000454952 PNPLA6Q8IY17 1366 aa12.06□□□□□ -0.48
NIF3L1-209ENST00000454952 PPLO60437 1756 aa12.05□□□□□ -0.48
NIF3L1-209ENST00000454952 RBM6P78332 1123 aaKnown RBP12.05□□□□□ -0.48
NIF3L1-209ENST00000454952 C8orf37Q96NL8 207 aa12.05□□□□□ -0.48
NIF3L1-209ENST00000454952 NGLY1Q96IV0 654 aa12.04□□□□□ -0.48
NIF3L1-209ENST00000454952 ROBO2Q9HCK4 1378 aa12.04□□□□□ -0.48
NIF3L1-209ENST00000454952 QTRT2Q9H974 415 aaKnown RBP12.03□□□□□ -0.48
NIF3L1-209ENST00000454952 SOS2Q07890 1332 aaPredicted RBP12.03□□□□□ -0.48
NIF3L1-209ENST00000454952 ACIN1Q9UKV3 1341 aaKnown RBP12.02□□□□□ -0.49
NIF3L1-209ENST00000454952 CDC42BPGQ6DT37 1551 aa12.01□□□□□ -0.49
NIF3L1-209ENST00000454952 DDX17Q92841 729 aaKnown RBP12.01□□□□□ -0.49
NIF3L1-209ENST00000454952 NPHP3Q7Z494 1330 aa12.01□□□□□ -0.49
NIF3L1-209ENST00000454952 LRPPRCP42704 1394 aaKnown RBP12.01□□□□□ -0.49
NIF3L1-209ENST00000454952 CCDC144AA2RUR9 1427 aa12.01□□□□□ -0.49
NIF3L1-209ENST00000454952 COL22A1Q8NFW1 1626 aaPredicted RBP12□□□□□ -0.49
NIF3L1-209ENST00000454952 ADAMTS2O95450 1211 aa12□□□□□ -0.49
NIF3L1-209ENST00000454952 ANKRD30BQ9BXX2 1392 aa12□□□□□ -0.49
NIF3L1-209ENST00000454952 RGS12O14924 1447 aa12□□□□□ -0.49
NIF3L1-209ENST00000454952 ORAI2Q96SN7 254 aa11.99□□□□□ -0.49
NIF3L1-209ENST00000454952 TRPC5Q9UL62 973 aaPredicted RBP11.99□□□□□ -0.49
NIF3L1-209ENST00000454952 ATAD2Q6PL18 1390 aa11.98□□□□□ -0.49
NIF3L1-209ENST00000454952 MYCNP04198 464 aaPredicted RBP11.98□□□□□ -0.49
NIF3L1-209ENST00000454952 USP21Q9UK80 565 aa11.98□□□□□ -0.49
NIF3L1-209ENST00000454952 TECPR2O15040 1411 aa11.97□□□□□ -0.49
NIF3L1-209ENST00000454952 ESCO1Q5FWF5 840 aa11.97□□□□□ -0.49
NIF3L1-209ENST00000454952 FNBP4Q8N3X1 1017 aaPredicted RBP11.97□□□□□ -0.49
NIF3L1-209ENST00000454952 KNDC1Q76NI1 1749 aa11.97□□□□□ -0.49
NIF3L1-209ENST00000454952 MARF1Q9Y4F3 1742 aaKnown RBP11.97□□□□□ -0.49
NIF3L1-209ENST00000454952 IFT172Q9UG01 1749 aa11.96□□□□□ -0.49
NIF3L1-209ENST00000454952 ABCC11Q96J66 1382 aa11.95□□□□□ -0.5
NIF3L1-209ENST00000454952 KIF1AQ12756 1690 aa11.95□□□□□ -0.5
NIF3L1-209ENST00000454952 MYOM2P54296 1465 aa11.95□□□□□ -0.5
NIF3L1-209ENST00000454952 ATRNO75882 1429 aa11.94□□□□□ -0.5
NIF3L1-209ENST00000454952 SPATA31E1Q6ZUB1 1445 aa11.94□□□□□ -0.5
NIF3L1-209ENST00000454952 ADGRF5Q8IZF2 1346 aa11.94□□□□□ -0.5
NIF3L1-209ENST00000454952 PXDNQ92626 1479 aa11.94□□□□□ -0.5
NIF3L1-209ENST00000454952 RGL3Q3MIN7 710 aa11.93□□□□□ -0.5
NIF3L1-209ENST00000454952 SIRT1Q96EB6 747 aa11.93□□□□□ -0.5
NIF3L1-209ENST00000454952 MPHOSPH9Q99550 1183 aa11.93□□□□□ -0.5
NIF3L1-209ENST00000454952 STK26Q9P289 416 aa11.93□□□□□ -0.5
NIF3L1-209ENST00000454952 PIK3C2GO75747 1445 aa11.93□□□□□ -0.5
NIF3L1-209ENST00000454952 FMN2Q9NZ56 1722 aa11.92□□□□□ -0.5
NIF3L1-209ENST00000454952 FOXO3O43524 673 aa11.92□□□□□ -0.5
NIF3L1-209ENST00000454952 CCDC125Q86Z20 511 aa11.92□□□□□ -0.5
NIF3L1-209ENST00000454952 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-209ENST00000454952 YTHDC2Q9H6S0 1430 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-209ENST00000454952 ATXN8OSP0DMR3 200 aa11.9□□□□□ -0.5
NIF3L1-209ENST00000454952 WAPLQ7Z5K2 1190 aa11.9□□□□□ -0.5
NIF3L1-209ENST00000454952 BCL9LQ86UU0 1499 aa11.89□□□□□ -0.51
NIF3L1-209ENST00000454952 PSME1Q06323 249 aa11.89□□□□□ -0.51
NIF3L1-209ENST00000454952 DHX57Q6P158 1386 aaKnown RBP11.89□□□□□ -0.51
NIF3L1-209ENST00000454952 SPATA31A3Q5VYP0 1347 aa11.88□□□□□ -0.51
NIF3L1-209ENST00000454952 XPCQ01831 940 aaPredicted RBP11.88□□□□□ -0.51
NIF3L1-209ENST00000454952 TMEM132EQ6IEE7 984 aa11.88□□□□□ -0.51
NIF3L1-209ENST00000454952 GJD4Q96KN9 370 aaPredicted RBP11.88□□□□□ -0.51
NIF3L1-209ENST00000454952 C14orf93Q9H972 538 aaKnown RBP11.88□□□□□ -0.51
NIF3L1-209ENST00000454952 NUTM2FA1L443 756 aa11.87□□□□□ -0.51
NIF3L1-209ENST00000454952 HAP1P54257 671 aaPredicted RBP11.87□□□□□ -0.51
NIF3L1-209ENST00000454952 UNC5CLQ8IV45 518 aa11.87□□□□□ -0.51
NIF3L1-209ENST00000454952 ZRANB1Q9UGI0 708 aa11.87□□□□□ -0.51
NIF3L1-209ENST00000454952 NRXN1Q9ULB1 1477 aa11.87□□□□□ -0.51
NIF3L1-209ENST00000454952 USP32Q8NFA0 1604 aa11.86□□□□□ -0.51
NIF3L1-209ENST00000454952 KRT28Q7Z3Y7 464 aa11.86□□□□□ -0.51
NIF3L1-209ENST00000454952 PHF8Q9UPP1 1060 aa11.86□□□□□ -0.51
NIF3L1-209ENST00000454952 ARHGEF10O15013 1369 aa11.86□□□□□ -0.51
NIF3L1-209ENST00000454952 PLEKHH1Q9ULM0 1364 aa11.86□□□□□ -0.51
NIF3L1-209ENST00000454952 SLIT2O94813 1529 aa11.86□□□□□ -0.51
NIF3L1-209ENST00000454952 TNS3Q68CZ2 1445 aa11.86□□□□□ -0.51
NIF3L1-209ENST00000454952 RGPD8O14715 1765 aaPredicted RBP11.85□□□□□ -0.51
NIF3L1-209ENST00000454952 SBNO1A3KN83 1393 aa11.85□□□□□ -0.51
NIF3L1-209ENST00000454952 EIF3AQ14152 1382 aaKnown RBP11.85□□□□□ -0.51
NIF3L1-209ENST00000454952 NWD2Q9ULI1 1742 aa11.85□□□□□ -0.51
NIF3L1-209ENST00000454952 DLC1Q96QB1 1528 aa11.85□□□□□ -0.51
NIF3L1-209ENST00000454952 ANKARQ7Z5J8 1434 aa11.84□□□□□ -0.51
NIF3L1-209ENST00000454952 RALGAPBQ86X10 1494 aa11.83□□□□□ -0.52
NIF3L1-209ENST00000454952 POGKQ9P215 609 aa11.83□□□□□ -0.52
NIF3L1-209ENST00000454952 SF3B2Q13435 895 aaKnown RBP11.82□□□□□ -0.52
NIF3L1-209ENST00000454952 CFAP70Q5T0N1 1121 aa11.82□□□□□ -0.52
NIF3L1-209ENST00000454952 POTEHQ6S545 545 aa11.82□□□□□ -0.52
NIF3L1-209ENST00000454952 STAC3Q96MF2 364 aa11.82□□□□□ -0.52
NIF3L1-209ENST00000454952 PRAM1Q96QH2 718 aa11.82□□□□□ -0.52
NIF3L1-209ENST00000454952 BLMP54132 1417 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-209ENST00000454952 ADGRB2O60241 1585 aa11.82□□□□□ -0.52
NIF3L1-209ENST00000454952 GLI3P10071 1580 aa11.82□□□□□ -0.52
NIF3L1-209ENST00000454952 VPS72Q15906 364 aa11.81□□□□□ -0.52
NIF3L1-209ENST00000454952 PLCH1Q4KWH8 1693 aa11.81□□□□□ -0.52
NIF3L1-209ENST00000454952 ABCA3Q99758 1704 aa11.8□□□□□ -0.52
NIF3L1-209ENST00000454952 LMOD2Q6P5Q4 547 aa11.8□□□□□ -0.52
NIF3L1-209ENST00000454952 BRWD3Q6RI45 1802 aa11.8□□□□□ -0.52
NIF3L1-209ENST00000454952 GPRASP1Q5JY77 1395 aa11.79□□□□□ -0.52
NIF3L1-209ENST00000454952 CCDC9Q9Y3X0 531 aaKnown RBP11.79□□□□□ -0.52
NIF3L1-209ENST00000454952 ONECUT3O60422 494 aaPredicted RBP11.78□□□□□ -0.52
NIF3L1-209ENST00000454952 SAFB2Q14151 953 aaKnown RBP eCLIP11.78□□□□□ -0.52
NIF3L1-209ENST00000454952 SEPT12Q8IYM1 358 aa11.78□□□□□ -0.52
NIF3L1-209ENST00000454952 ADGRB1O14514 1584 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms