RNA–Protein interactions for RNA: ENST00000454444.1

AC007879.2-201, humanhuman

TSL 4 BASIC

Gene AC007879.2, Length 551 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.2-201ENST00000454444 FOXO3O43524 673 aa11.62□□□□□ -0.55
AC007879.2-201ENST00000454444 MPHOSPH9Q99550 1183 aa11.62□□□□□ -0.55
AC007879.2-201ENST00000454444 SETD1AO15047 1707 aaKnown RBP11.62□□□□□ -0.55
AC007879.2-201ENST00000454444 ACIN1Q9UKV3 1341 aaKnown RBP11.61□□□□□ -0.55
AC007879.2-201ENST00000454444 ANKRD30BQ9BXX2 1392 aa11.61□□□□□ -0.55
AC007879.2-201ENST00000454444 ADGRF5Q8IZF2 1346 aa11.6□□□□□ -0.55
AC007879.2-201ENST00000454444 HAP1P54257 671 aaPredicted RBP11.6□□□□□ -0.55
AC007879.2-201ENST00000454444 XPCQ01831 940 aaPredicted RBP11.6□□□□□ -0.55
AC007879.2-201ENST00000454444 WAPLQ7Z5K2 1190 aa11.6□□□□□ -0.55
AC007879.2-201ENST00000454444 TMEM132EQ6IEE7 984 aa11.59□□□□□ -0.55
AC007879.2-201ENST00000454444 NHSL1Q5SYE7 1610 aa11.59□□□□□ -0.55
AC007879.2-201ENST00000454444 ATAD2Q6PL18 1390 aa11.58□□□□□ -0.56
AC007879.2-201ENST00000454444 FNBP4Q8N3X1 1017 aaPredicted RBP11.58□□□□□ -0.56
AC007879.2-201ENST00000454444 POTEDQ86YR6 584 aa11.57□□□□□ -0.56
AC007879.2-201ENST00000454444 NALCNQ8IZF0 1738 aa11.57□□□□□ -0.56
AC007879.2-201ENST00000454444 RGS12O14924 1447 aa11.56□□□□□ -0.56
AC007879.2-201ENST00000454444 PSME1Q06323 249 aa11.56□□□□□ -0.56
AC007879.2-201ENST00000454444 ABCC11Q96J66 1382 aa11.55□□□□□ -0.56
AC007879.2-201ENST00000454444 PRAG1Q86YV5 1406 aa11.55□□□□□ -0.56
AC007879.2-201ENST00000454444 LMOD2Q6P5Q4 547 aa11.55□□□□□ -0.56
AC007879.2-201ENST00000454444 POGKQ9P215 609 aa11.55□□□□□ -0.56
AC007879.2-201ENST00000454444 DHX57Q6P158 1386 aaKnown RBP11.54□□□□□ -0.56
AC007879.2-201ENST00000454444 PLEKHG5O94827 1062 aa11.54□□□□□ -0.56
AC007879.2-201ENST00000454444 KRT28Q7Z3Y7 464 aa11.54□□□□□ -0.56
AC007879.2-201ENST00000454444 SAFB2Q14151 953 aaKnown RBP eCLIP11.53□□□□□ -0.56
AC007879.2-201ENST00000454444 CCDC125Q86Z20 511 aa11.53□□□□□ -0.56
AC007879.2-201ENST00000454444 SIRT1Q96EB6 747 aa11.53□□□□□ -0.56
AC007879.2-201ENST00000454444 GJD4Q96KN9 370 aaPredicted RBP11.53□□□□□ -0.56
AC007879.2-201ENST00000454444 C14orf93Q9H972 538 aaKnown RBP11.53□□□□□ -0.56
AC007879.2-201ENST00000454444 ZRANB1Q9UGI0 708 aa11.53□□□□□ -0.56
AC007879.2-201ENST00000454444 UNC5CLQ8IV45 518 aa11.52□□□□□ -0.57
AC007879.2-201ENST00000454444 PHF8Q9UPP1 1060 aa11.52□□□□□ -0.57
AC007879.2-201ENST00000454444 CCDC9Q9Y3X0 531 aaKnown RBP11.52□□□□□ -0.57
AC007879.2-201ENST00000454444 SPATA31E1Q6ZUB1 1445 aa11.52□□□□□ -0.57
AC007879.2-201ENST00000454444 YTHDC2Q9H6S0 1430 aaKnown RBP11.52□□□□□ -0.57
AC007879.2-201ENST00000454444 CDC42BPGQ6DT37 1551 aa11.51□□□□□ -0.57
AC007879.2-201ENST00000454444 SF3B2Q13435 895 aaKnown RBP11.51□□□□□ -0.57
AC007879.2-201ENST00000454444 CFAP70Q5T0N1 1121 aa11.51□□□□□ -0.57
AC007879.2-201ENST00000454444 PRAM1Q96QH2 718 aa11.51□□□□□ -0.57
AC007879.2-201ENST00000454444 SPATA31A3Q5VYP0 1347 aa11.51□□□□□ -0.57
AC007879.2-201ENST00000454444 PLEKHH1Q9ULM0 1364 aa11.51□□□□□ -0.57
AC007879.2-201ENST00000454444 PPLO60437 1756 aa11.51□□□□□ -0.57
AC007879.2-201ENST00000454444 TECPR2O15040 1411 aa11.51□□□□□ -0.57
AC007879.2-201ENST00000454444 ATRNO75882 1429 aa11.51□□□□□ -0.57
AC007879.2-201ENST00000454444 PIK3C2GO75747 1445 aa11.5□□□□□ -0.57
AC007879.2-201ENST00000454444 MYOM2P54296 1465 aa11.5□□□□□ -0.57
AC007879.2-201ENST00000454444 A0A0G2JS52 829 aa11.49□□□□□ -0.57
AC007879.2-201ENST00000454444 MYT1Q01538 1121 aa11.49□□□□□ -0.57
AC007879.2-201ENST00000454444 KDM2AQ9Y2K7 1162 aa11.49□□□□□ -0.57
AC007879.2-201ENST00000454444 PXDNQ92626 1479 aa11.49□□□□□ -0.57
AC007879.2-201ENST00000454444 LAMC1P11047 1609 aa11.49□□□□□ -0.57
AC007879.2-201ENST00000454444 BCL9LQ86UU0 1499 aa11.48□□□□□ -0.57
AC007879.2-201ENST00000454444 PMFBP1Q8TBY8 1022 aa11.47□□□□□ -0.57
AC007879.2-201ENST00000454444 CABLES1Q8TDN4 633 aa11.47□□□□□ -0.57
AC007879.2-201ENST00000454444 TRAK1Q9UPV9 953 aa11.47□□□□□ -0.57
AC007879.2-201ENST00000454444 ARHGEF10O15013 1369 aa11.46□□□□□ -0.57
AC007879.2-201ENST00000454444 DCAF11Q8TEB1 546 aa11.46□□□□□ -0.57
AC007879.2-201ENST00000454444 GPRASP1Q5JY77 1395 aa11.45□□□□□ -0.58
AC007879.2-201ENST00000454444 SEPT12Q8IYM1 358 aa11.45□□□□□ -0.58
AC007879.2-201ENST00000454444 HIRIP3Q9BW71 556 aaPredicted RBP11.45□□□□□ -0.58
AC007879.2-201ENST00000454444 COL22A1Q8NFW1 1626 aaPredicted RBP11.45□□□□□ -0.58
AC007879.2-201ENST00000454444 TNS3Q68CZ2 1445 aa11.44□□□□□ -0.58
AC007879.2-201ENST00000454444 SBNO1A3KN83 1393 aa11.44□□□□□ -0.58
AC007879.2-201ENST00000454444 EIF3AQ14152 1382 aaKnown RBP11.44□□□□□ -0.58
AC007879.2-201ENST00000454444 MINK1Q8N4C8 1332 aaPredicted RBP11.44□□□□□ -0.58
AC007879.2-201ENST00000454444 PAK3O75914 559 aaPredicted RBP11.44□□□□□ -0.58
AC007879.2-201ENST00000454444 VPS72Q15906 364 aa11.44□□□□□ -0.58
AC007879.2-201ENST00000454444 NGDNQ8NEJ9 315 aaKnown RBP11.44□□□□□ -0.58
AC007879.2-201ENST00000454444 STAC3Q96MF2 364 aa11.44□□□□□ -0.58
AC007879.2-201ENST00000454444 RAB3GAP2Q9H2M9 1393 aa11.43□□□□□ -0.58
AC007879.2-201ENST00000454444 KRT27Q7Z3Y8 459 aa11.43□□□□□ -0.58
AC007879.2-201ENST00000454444 RALGAPBQ86X10 1494 aa11.43□□□□□ -0.58
AC007879.2-201ENST00000454444 KIF1AQ12756 1690 aa11.42□□□□□ -0.58
AC007879.2-201ENST00000454444 SLIT2O94813 1529 aa11.41□□□□□ -0.58
AC007879.2-201ENST00000454444 FAM83GA6ND36 823 aa11.41□□□□□ -0.58
AC007879.2-201ENST00000454444 WASLO00401 505 aaPredicted RBP11.41□□□□□ -0.58
AC007879.2-201ENST00000454444 BTG4Q9NY30 223 aa11.41□□□□□ -0.58
AC007879.2-201ENST00000454444 BLMP54132 1417 aaPredicted RBP11.41□□□□□ -0.58
AC007879.2-201ENST00000454444 ANKARQ7Z5J8 1434 aa11.41□□□□□ -0.58
AC007879.2-201ENST00000454444 NRXN1Q9ULB1 1477 aa11.4□□□□□ -0.58
AC007879.2-201ENST00000454444 KNDC1Q76NI1 1749 aa11.4□□□□□ -0.58
AC007879.2-201ENST00000454444 BAG6P46379 1132 aa11.39□□□□□ -0.59
AC007879.2-201ENST00000454444 FAM98CQ17RN3 349 aaKnown RBP11.39□□□□□ -0.59
AC007879.2-201ENST00000454444 DEFB132Q7Z7B7 95 aa11.39□□□□□ -0.59
AC007879.2-201ENST00000454444 PRDM11Q9NQV5 511 aa11.39□□□□□ -0.59
AC007879.2-201ENST00000454444 FMN2Q9NZ56 1722 aa11.39□□□□□ -0.59
AC007879.2-201ENST00000454444 ONECUT3O60422 494 aaPredicted RBP11.38□□□□□ -0.59
AC007879.2-201ENST00000454444 IFT172Q9UG01 1749 aa11.38□□□□□ -0.59
AC007879.2-201ENST00000454444 DLC1Q96QB1 1528 aa11.37□□□□□ -0.59
AC007879.2-201ENST00000454444 USP32Q8NFA0 1604 aa11.37□□□□□ -0.59
AC007879.2-201ENST00000454444 HRCP23327 699 aa11.36□□□□□ -0.59
AC007879.2-201ENST00000454444 EVA1CP58658 441 aa11.36□□□□□ -0.59
AC007879.2-201ENST00000454444 NUDT16Q96DE0 195 aaKnown RBP11.36□□□□□ -0.59
AC007879.2-201ENST00000454444 MARF1Q9Y4F3 1742 aaKnown RBP11.35□□□□□ -0.59
AC007879.2-201ENST00000454444 PRR36Q9H6K5 1346 aa11.35□□□□□ -0.59
AC007879.2-201ENST00000454444 GLI3P10071 1580 aa11.34□□□□□ -0.59
AC007879.2-201ENST00000454444 CDK19Q9BWU1 502 aa11.34□□□□□ -0.59
AC007879.2-201ENST00000454444 STRN4Q9NRL3 753 aa11.34□□□□□ -0.59
AC007879.2-201ENST00000454444 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.34□□□□□ -0.59
AC007879.2-201ENST00000454444 NUTM2GQ5VZR2 741 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms