RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 HFM1A2PYH4 1435 aa9.12□□□□□ -0.95
HLA-DPA3-207ENST00000454398 MARF1Q9Y4F3 1742 aaKnown RBP9.11□□□□□ -0.95
HLA-DPA3-207ENST00000454398 ADGRF5Q8IZF2 1346 aa9.1□□□□□ -0.95
HLA-DPA3-207ENST00000454398 PLEKHG5O94827 1062 aa9.1□□□□□ -0.95
HLA-DPA3-207ENST00000454398 LRRC59Q96AG4 307 aaKnown RBP9.1□□□□□ -0.95
HLA-DPA3-207ENST00000454398 NGLY1Q96IV0 654 aa9.1□□□□□ -0.95
HLA-DPA3-207ENST00000454398 QTRT2Q9H974 415 aaKnown RBP9.1□□□□□ -0.95
HLA-DPA3-207ENST00000454398 ATRNO75882 1429 aa9.1□□□□□ -0.95
HLA-DPA3-207ENST00000454398 KNDC1Q76NI1 1749 aa9.1□□□□□ -0.95
HLA-DPA3-207ENST00000454398 FMN2Q9NZ56 1722 aa9.1□□□□□ -0.95
HLA-DPA3-207ENST00000454398 BCL9LQ86UU0 1499 aa9.09□□□□□ -0.95
HLA-DPA3-207ENST00000454398 ABCA3Q99758 1704 aa9.09□□□□□ -0.95
HLA-DPA3-207ENST00000454398 SPATA31E1Q6ZUB1 1445 aa9.08□□□□□ -0.96
HLA-DPA3-207ENST00000454398 RBM6P78332 1123 aaKnown RBP9.08□□□□□ -0.96
HLA-DPA3-207ENST00000454398 SLC4A1APQ9BWU0 796 aaKnown RBP9.08□□□□□ -0.96
HLA-DPA3-207ENST00000454398 STK26Q9P289 416 aa9.08□□□□□ -0.96
HLA-DPA3-207ENST00000454398 USP21Q9UK80 565 aa9.08□□□□□ -0.96
HLA-DPA3-207ENST00000454398 USP32Q8NFA0 1604 aa9.08□□□□□ -0.96
HLA-DPA3-207ENST00000454398 GLI3P10071 1580 aa9.07□□□□□ -0.96
HLA-DPA3-207ENST00000454398 PLCH1Q4KWH8 1693 aa9.07□□□□□ -0.96
HLA-DPA3-207ENST00000454398 RGPD8O14715 1765 aaPredicted RBP9.07□□□□□ -0.96
HLA-DPA3-207ENST00000454398 ESCO1Q5FWF5 840 aa9.07□□□□□ -0.96
HLA-DPA3-207ENST00000454398 WAPLQ7Z5K2 1190 aa9.07□□□□□ -0.96
HLA-DPA3-207ENST00000454398 FNBP4Q8N3X1 1017 aaPredicted RBP9.07□□□□□ -0.96
HLA-DPA3-207ENST00000454398 ATAD2Q6PL18 1390 aa9.07□□□□□ -0.96
HLA-DPA3-207ENST00000454398 CCDC144AA2RUR9 1427 aa9.06□□□□□ -0.96
HLA-DPA3-207ENST00000454398 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.06□□□□□ -0.96
HLA-DPA3-207ENST00000454398 BRWD3Q6RI45 1802 aa9.06□□□□□ -0.96
HLA-DPA3-207ENST00000454398 FOXO3O43524 673 aa9.06□□□□□ -0.96
HLA-DPA3-207ENST00000454398 KIF1AQ12756 1690 aa9.06□□□□□ -0.96
HLA-DPA3-207ENST00000454398 TECPR2O15040 1411 aa9.05□□□□□ -0.96
HLA-DPA3-207ENST00000454398 PIK3C2GO75747 1445 aa9.05□□□□□ -0.96
HLA-DPA3-207ENST00000454398 RGL3Q3MIN7 710 aa9.05□□□□□ -0.96
HLA-DPA3-207ENST00000454398 TMEM132EQ6IEE7 984 aa9.05□□□□□ -0.96
HLA-DPA3-207ENST00000454398 RALGAPBQ86X10 1494 aa9.04□□□□□ -0.96
HLA-DPA3-207ENST00000454398 VGFO15240 615 aaPredicted RBP9.04□□□□□ -0.96
HLA-DPA3-207ENST00000454398 TRPC5Q9UL62 973 aaPredicted RBP9.04□□□□□ -0.96
HLA-DPA3-207ENST00000454398 NPHP3Q7Z494 1330 aa9.04□□□□□ -0.96
HLA-DPA3-207ENST00000454398 LRPPRCP42704 1394 aaKnown RBP9.03□□□□□ -0.96
HLA-DPA3-207ENST00000454398 SAFB2Q14151 953 aaKnown RBP eCLIP9.03□□□□□ -0.96
HLA-DPA3-207ENST00000454398 SLIT2O94813 1529 aa9.03□□□□□ -0.96
HLA-DPA3-207ENST00000454398 YTHDC2Q9H6S0 1430 aaKnown RBP9.03□□□□□ -0.96
HLA-DPA3-207ENST00000454398 TNS3Q68CZ2 1445 aa9.01□□□□□ -0.97
HLA-DPA3-207ENST00000454398 NRAPQ86VF7 1730 aa9.01□□□□□ -0.97
HLA-DPA3-207ENST00000454398 CABLES1Q8TDN4 633 aa9.01□□□□□ -0.97
HLA-DPA3-207ENST00000454398 NRXN1Q9ULB1 1477 aa9.01□□□□□ -0.97
HLA-DPA3-207ENST00000454398 RPGRIP1LQ68CZ1 1315 aa9.01□□□□□ -0.97
HLA-DPA3-207ENST00000454398 ABCC11Q96J66 1382 aa9□□□□□ -0.97
HLA-DPA3-207ENST00000454398 SPATA31A3Q5VYP0 1347 aa9□□□□□ -0.97
HLA-DPA3-207ENST00000454398 TRPM3Q9HCF6 1732 aaPredicted RBP9□□□□□ -0.97
HLA-DPA3-207ENST00000454398 ANKRD30BQ9BXX2 1392 aa8.99□□□□□ -0.97
HLA-DPA3-207ENST00000454398 DEFB132Q7Z7B7 95 aa8.99□□□□□ -0.97
HLA-DPA3-207ENST00000454398 NWD2Q9ULI1 1742 aa8.99□□□□□ -0.97
HLA-DPA3-207ENST00000454398 CRYBG1Q9Y4K1 1723 aa8.98□□□□□ -0.97
HLA-DPA3-207ENST00000454398 LMOD2Q6P5Q4 547 aa8.98□□□□□ -0.97
HLA-DPA3-207ENST00000454398 GJD4Q96KN9 370 aaPredicted RBP8.98□□□□□ -0.97
HLA-DPA3-207ENST00000454398 ADGRB1O14514 1584 aa8.98□□□□□ -0.97
HLA-DPA3-207ENST00000454398 ADGRB2O60241 1585 aa8.98□□□□□ -0.97
HLA-DPA3-207ENST00000454398 HAP1P54257 671 aaPredicted RBP8.97□□□□□ -0.97
HLA-DPA3-207ENST00000454398 CFAP70Q5T0N1 1121 aa8.97□□□□□ -0.97
HLA-DPA3-207ENST00000454398 PRAM1Q96QH2 718 aa8.97□□□□□ -0.97
HLA-DPA3-207ENST00000454398 MPHOSPH9Q99550 1183 aa8.97□□□□□ -0.97
HLA-DPA3-207ENST00000454398 HIRIP3Q9BW71 556 aaPredicted RBP8.97□□□□□ -0.97
HLA-DPA3-207ENST00000454398 PRR36Q9H6K5 1346 aa8.97□□□□□ -0.97
HLA-DPA3-207ENST00000454398 ALS2Q96Q42 1657 aa8.97□□□□□ -0.97
HLA-DPA3-207ENST00000454398 BLMP54132 1417 aaPredicted RBP8.97□□□□□ -0.97
HLA-DPA3-207ENST00000454398 A0A0G2JS52 829 aa8.96□□□□□ -0.98
HLA-DPA3-207ENST00000454398 MYT1Q01538 1121 aa8.96□□□□□ -0.98
HLA-DPA3-207ENST00000454398 KRT28Q7Z3Y7 464 aa8.96□□□□□ -0.98
HLA-DPA3-207ENST00000454398 UNC5CLQ8IV45 518 aa8.96□□□□□ -0.98
HLA-DPA3-207ENST00000454398 CCDC9Q9Y3X0 531 aaKnown RBP8.96□□□□□ -0.98
HLA-DPA3-207ENST00000454398 ARHGEF28Q8N1W1 1705 aaKnown RBP8.95□□□□□ -0.98
HLA-DPA3-207ENST00000454398 PMFBP1Q8TBY8 1022 aa8.95□□□□□ -0.98
HLA-DPA3-207ENST00000454398 C14orf93Q9H972 538 aaKnown RBP8.95□□□□□ -0.98
HLA-DPA3-207ENST00000454398 ZRANB1Q9UGI0 708 aa8.95□□□□□ -0.98
HLA-DPA3-207ENST00000454398 PHF8Q9UPP1 1060 aa8.95□□□□□ -0.98
HLA-DPA3-207ENST00000454398 TNS1Q9HBL0 1735 aaKnown RBP8.94□□□□□ -0.98
HLA-DPA3-207ENST00000454398 FAM182BQ5T319 152 aa8.94□□□□□ -0.98
HLA-DPA3-207ENST00000454398 SEPT12Q8IYM1 358 aa8.94□□□□□ -0.98
HLA-DPA3-207ENST00000454398 MINK1Q8N4C8 1332 aaPredicted RBP8.94□□□□□ -0.98
HLA-DPA3-207ENST00000454398 DLC1Q96QB1 1528 aa8.94□□□□□ -0.98
HLA-DPA3-207ENST00000454398 TULP4Q9NRJ4 1543 aa8.94□□□□□ -0.98
HLA-DPA3-207ENST00000454398 LRP5O75197 1615 aa8.94□□□□□ -0.98
HLA-DPA3-207ENST00000454398 PHRF1Q9P1Y6 1649 aaKnown RBP8.94□□□□□ -0.98
HLA-DPA3-207ENST00000454398 PSDA5PKW4 1024 aaPredicted RBP8.93□□□□□ -0.98
HLA-DPA3-207ENST00000454398 FAM83GA6ND36 823 aa8.93□□□□□ -0.98
HLA-DPA3-207ENST00000454398 RAB3GAP2Q9H2M9 1393 aa8.93□□□□□ -0.98
HLA-DPA3-207ENST00000454398 THSD7AQ9UPZ6 1657 aa8.93□□□□□ -0.98
HLA-DPA3-207ENST00000454398 COL14A1Q05707 1796 aaKnown RBP8.93□□□□□ -0.98
HLA-DPA3-207ENST00000454398 ANKARQ7Z5J8 1434 aa8.92□□□□□ -0.98
HLA-DPA3-207ENST00000454398 SBNO1A3KN83 1393 aa8.92□□□□□ -0.98
HLA-DPA3-207ENST00000454398 ARHGEF10O15013 1369 aa8.92□□□□□ -0.98
HLA-DPA3-207ENST00000454398 VPS72Q15906 364 aa8.92□□□□□ -0.98
HLA-DPA3-207ENST00000454398 FAM98CQ17RN3 349 aaKnown RBP8.92□□□□□ -0.98
HLA-DPA3-207ENST00000454398 RGPD1P0DJD0 1748 aa8.91□□□□□ -0.98
HLA-DPA3-207ENST00000454398 TOPAZ1Q8N9V7 1692 aa8.91□□□□□ -0.98
HLA-DPA3-207ENST00000454398 ATP7BP35670 1465 aa8.91□□□□□ -0.98
HLA-DPA3-207ENST00000454398 DHX57Q6P158 1386 aaKnown RBP8.91□□□□□ -0.98
HLA-DPA3-207ENST00000454398 ONECUT3O60422 494 aaPredicted RBP8.91□□□□□ -0.98
HLA-DPA3-207ENST00000454398 POGKQ9P215 609 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms