RNA–Protein interactions for RNA: ENST00000454141.5

SEC22C-212, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-212ENST00000454141 STK26Q9P289 416 aa27.08■■□□□ 1.93
SEC22C-212ENST00000454141 ABCC11Q96J66 1382 aa27.07■■□□□ 1.92
SEC22C-212ENST00000454141 MYOM2P54296 1465 aa27.06■■□□□ 1.92
SEC22C-212ENST00000454141 KNDC1Q76NI1 1749 aa27.05■■□□□ 1.92
SEC22C-212ENST00000454141 TMEM132EQ6IEE7 984 aa27.05■■□□□ 1.92
SEC22C-212ENST00000454141 NRXN1Q9ULB1 1477 aa27.04■■□□□ 1.92
SEC22C-212ENST00000454141 SOS2Q07890 1332 aaPredicted RBP27.03■■□□□ 1.92
SEC22C-212ENST00000454141 WAPLQ7Z5K2 1190 aa27.03■■□□□ 1.92
SEC22C-212ENST00000454141 YTHDC2Q9H6S0 1430 aaKnown RBP27.03■■□□□ 1.92
SEC22C-212ENST00000454141 PLEKHH1Q9ULM0 1364 aa27■■□□□ 1.91
SEC22C-212ENST00000454141 C14orf93Q9H972 538 aaKnown RBP26.99■■□□□ 1.91
SEC22C-212ENST00000454141 AFF2P51816 1311 aa26.98■■□□□ 1.91
SEC22C-212ENST00000454141 ESCO1Q5FWF5 840 aa26.98■■□□□ 1.91
SEC22C-212ENST00000454141 NPHP3Q7Z494 1330 aa26.96■■□□□ 1.91
SEC22C-212ENST00000454141 CFAP70Q5T0N1 1121 aa26.95■■□□□ 1.9
SEC22C-212ENST00000454141 C8orf37Q96NL8 207 aa26.95■■□□□ 1.9
SEC22C-212ENST00000454141 SIRT1Q96EB6 747 aa26.94■■□□□ 1.9
SEC22C-212ENST00000454141 DHX57Q6P158 1386 aaKnown RBP26.94■■□□□ 1.9
SEC22C-212ENST00000454141 PXDNQ92626 1479 aa26.93■■□□□ 1.9
SEC22C-212ENST00000454141 NUTM2FA1L443 756 aa26.92■■□□□ 1.9
SEC22C-212ENST00000454141 HRCP23327 699 aa26.92■■□□□ 1.9
SEC22C-212ENST00000454141 RXRBP28702 533 aa26.92■■□□□ 1.9
SEC22C-212ENST00000454141 FMN2Q9NZ56 1722 aa26.91■■□□□ 1.9
SEC22C-212ENST00000454141 ADAMTS2O95450 1211 aa26.9■■□□□ 1.9
SEC22C-212ENST00000454141 COL22A1Q8NFW1 1626 aaPredicted RBP26.9■■□□□ 1.9
SEC22C-212ENST00000454141 FOXO3O43524 673 aa26.89■■□□□ 1.9
SEC22C-212ENST00000454141 CDK12Q9NYV4 1490 aaPredicted RBP26.88■■□□□ 1.89
SEC22C-212ENST00000454141 XPCQ01831 940 aaPredicted RBP26.86■■□□□ 1.89
SEC22C-212ENST00000454141 NGLY1Q96IV0 654 aa26.86■■□□□ 1.89
SEC22C-212ENST00000454141 DLC1Q96QB1 1528 aa26.85■■□□□ 1.89
SEC22C-212ENST00000454141 ADGRB1O14514 1584 aa26.85■■□□□ 1.89
SEC22C-212ENST00000454141 PRAM1Q96QH2 718 aa26.85■■□□□ 1.89
SEC22C-212ENST00000454141 KIF1AQ12756 1690 aa26.85■■□□□ 1.89
SEC22C-212ENST00000454141 DCAF11Q8TEB1 546 aa26.83■■□□□ 1.89
SEC22C-212ENST00000454141 QTRT2Q9H974 415 aaKnown RBP26.83■■□□□ 1.89
SEC22C-212ENST00000454141 SAFB2Q14151 953 aaKnown RBP eCLIP26.82■■□□□ 1.88
SEC22C-212ENST00000454141 KDM2AQ9Y2K7 1162 aa26.81■■□□□ 1.88
SEC22C-212ENST00000454141 RBM6P78332 1123 aaKnown RBP26.8■■□□□ 1.88
SEC22C-212ENST00000454141 STAC3Q96MF2 364 aa26.8■■□□□ 1.88
SEC22C-212ENST00000454141 POGKQ9P215 609 aa26.8■■□□□ 1.88
SEC22C-212ENST00000454141 RGS12O14924 1447 aa26.78■■□□□ 1.88
SEC22C-212ENST00000454141 ADGRB2O60241 1585 aa26.77■■□□□ 1.88
SEC22C-212ENST00000454141 FNBP4Q8N3X1 1017 aaPredicted RBP26.77■■□□□ 1.88
SEC22C-212ENST00000454141 USP21Q9UK80 565 aa26.77■■□□□ 1.88
SEC22C-212ENST00000454141 SPATA31A3Q5VYP0 1347 aa26.76■■□□□ 1.87
SEC22C-212ENST00000454141 PHF8Q9UPP1 1060 aa26.76■■□□□ 1.87
SEC22C-212ENST00000454141 TRAK1Q9UPV9 953 aa26.76■■□□□ 1.87
SEC22C-212ENST00000454141 UPF1Q92900 1129 aaKnown RBP eCLIP26.75■■□□□ 1.87
SEC22C-212ENST00000454141 KRT28Q7Z3Y7 464 aa26.74■■□□□ 1.87
SEC22C-212ENST00000454141 ANKARQ7Z5J8 1434 aa26.73■■□□□ 1.87
SEC22C-212ENST00000454141 TRPC5Q9UL62 973 aaPredicted RBP26.72■■□□□ 1.87
SEC22C-212ENST00000454141 ATRNO75882 1429 aa26.71■■□□□ 1.87
SEC22C-212ENST00000454141 TNS3Q68CZ2 1445 aa26.71■■□□□ 1.87
SEC22C-212ENST00000454141 RGPD8O14715 1765 aaPredicted RBP26.71■■□□□ 1.87
SEC22C-212ENST00000454141 USP32Q8NFA0 1604 aa26.7■■□□□ 1.86
SEC22C-212ENST00000454141 PSME1Q06323 249 aa26.7■■□□□ 1.86
SEC22C-212ENST00000454141 HIRIP3Q9BW71 556 aaPredicted RBP26.69■■□□□ 1.86
SEC22C-212ENST00000454141 MARF1Q9Y4F3 1742 aaKnown RBP26.69■■□□□ 1.86
SEC22C-212ENST00000454141 MINK1Q8N4C8 1332 aaPredicted RBP26.68■■□□□ 1.86
SEC22C-212ENST00000454141 EIF3AQ14152 1382 aaKnown RBP26.68■■□□□ 1.86
SEC22C-212ENST00000454141 BCL9LQ86UU0 1499 aa26.68■■□□□ 1.86
SEC22C-212ENST00000454141 SBNO1A3KN83 1393 aa26.67■■□□□ 1.86
SEC22C-212ENST00000454141 TULP4Q9NRJ4 1543 aa26.65■■□□□ 1.86
SEC22C-212ENST00000454141 PMFBP1Q8TBY8 1022 aa26.65■■□□□ 1.86
SEC22C-212ENST00000454141 ARHGEF10O15013 1369 aa26.63■■□□□ 1.85
SEC22C-212ENST00000454141 ARHGEF28Q8N1W1 1705 aaKnown RBP26.62■■□□□ 1.85
SEC22C-212ENST00000454141 WASLO00401 505 aaPredicted RBP26.62■■□□□ 1.85
SEC22C-212ENST00000454141 PRR36Q9H6K5 1346 aa26.62■■□□□ 1.85
SEC22C-212ENST00000454141 SLIT2O94813 1529 aa26.61■■□□□ 1.85
SEC22C-212ENST00000454141 HAP1P54257 671 aaPredicted RBP26.61■■□□□ 1.85
SEC22C-212ENST00000454141 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.59■■□□□ 1.85
SEC22C-212ENST00000454141 LMOD2Q6P5Q4 547 aa26.59■■□□□ 1.85
SEC22C-212ENST00000454141 CABLES1Q8TDN4 633 aa26.58■■□□□ 1.85
SEC22C-212ENST00000454141 ATAD2Q6PL18 1390 aa26.58■■□□□ 1.84
SEC22C-212ENST00000454141 UNC5CLQ8IV45 518 aa26.57■■□□□ 1.84
SEC22C-212ENST00000454141 GPRASP1Q5JY77 1395 aa26.57■■□□□ 1.84
SEC22C-212ENST00000454141 ABCA3Q99758 1704 aa26.56■■□□□ 1.84
SEC22C-212ENST00000454141 KIAA1210Q9ULL0 1709 aa26.56■■□□□ 1.84
SEC22C-212ENST00000454141 PLEKHG5O94827 1062 aa26.56■■□□□ 1.84
SEC22C-212ENST00000454141 GJD4Q96KN9 370 aaPredicted RBP26.56■■□□□ 1.84
SEC22C-212ENST00000454141 TRPM3Q9HCF6 1732 aaPredicted RBP26.56■■□□□ 1.84
SEC22C-212ENST00000454141 ATP7BP35670 1465 aa26.55■■□□□ 1.84
SEC22C-212ENST00000454141 RALGAPBQ86X10 1494 aa26.53■■□□□ 1.84
SEC22C-212ENST00000454141 ALS2Q96Q42 1657 aa26.51■■□□□ 1.83
SEC22C-212ENST00000454141 NGDNQ8NEJ9 315 aaKnown RBP26.51■■□□□ 1.83
SEC22C-212ENST00000454141 GLI3P10071 1580 aa26.5■■□□□ 1.83
SEC22C-212ENST00000454141 ITSN1Q15811 1721 aa26.5■■□□□ 1.83
SEC22C-212ENST00000454141 PLCH1Q4KWH8 1693 aa26.5■■□□□ 1.83
SEC22C-212ENST00000454141 NBPF1Q3BBV0 1214 aa26.49■■□□□ 1.83
SEC22C-212ENST00000454141 NUDT16Q96DE0 195 aaKnown RBP26.49■■□□□ 1.83
SEC22C-212ENST00000454141 EP400Q96L91 3159 aa26.48■■□□□ 1.83
SEC22C-212ENST00000454141 NWD2Q9ULI1 1742 aa26.48■■□□□ 1.83
SEC22C-212ENST00000454141 CDK19Q9BWU1 502 aa26.47■■□□□ 1.83
SEC22C-212ENST00000454141 VPS72Q15906 364 aa26.45■■□□□ 1.82
SEC22C-212ENST00000454141 FAM83GA6ND36 823 aa26.44■■□□□ 1.82
SEC22C-212ENST00000454141 PAK3O75914 559 aaPredicted RBP26.44■■□□□ 1.82
SEC22C-212ENST00000454141 TOPAZ1Q8N9V7 1692 aa26.43■■□□□ 1.82
SEC22C-212ENST00000454141 L3MBTL2Q969R5 705 aa26.41■■□□□ 1.82
SEC22C-212ENST00000454141 CCDC9Q9Y3X0 531 aaKnown RBP26.41■■□□□ 1.82
SEC22C-212ENST00000454141 CRYBG1Q9Y4K1 1723 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms