RNA–Protein interactions for RNA: ENST00000453498.1

AL359538.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL359538.1, Length 1,710 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL359538.1-201ENST00000453498 IFT140Q96RY7 1462 aa8.42□□□□□ -1.06
AL359538.1-201ENST00000453498 MDM2Q00987 491 aaPredicted RBP8.42□□□□□ -1.06
AL359538.1-201ENST00000453498 MROH2BQ7Z745 1585 aa8.42□□□□□ -1.06
AL359538.1-201ENST00000453498 ZC3H15Q8WU90 426 aaKnown RBP8.42□□□□□ -1.06
AL359538.1-201ENST00000453498 ZNF608Q9ULD9 1512 aaPredicted RBP8.42□□□□□ -1.06
AL359538.1-201ENST00000453498 ZMYND10O75800 440 aa8.41□□□□□ -1.06
AL359538.1-201ENST00000453498 TLL1O43897 1013 aa8.4□□□□□ -1.06
AL359538.1-201ENST00000453498 FUT2Q10981 343 aa8.4□□□□□ -1.06
AL359538.1-201ENST00000453498 SMARCA4P51532 1647 aa8.4□□□□□ -1.07
AL359538.1-201ENST00000453498 CLCN1P35523 988 aa8.4□□□□□ -1.07
AL359538.1-201ENST00000453498 GCGRP47871 477 aa8.4□□□□□ -1.07
AL359538.1-201ENST00000453498 PUS10Q3MIT2 529 aaKnown RBP8.4□□□□□ -1.07
AL359538.1-201ENST00000453498 BARGINQ6ZT62 677 aa8.4□□□□□ -1.07
AL359538.1-201ENST00000453498 GPCPD1Q9NPB8 672 aa8.39□□□□□ -1.07
AL359538.1-201ENST00000453498 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.39□□□□□ -1.07
AL359538.1-201ENST00000453498 SNAPC4Q5SXM2 1469 aa8.39□□□□□ -1.07
AL359538.1-201ENST00000453498 IQSEC2Q5JU85 1478 aa8.38□□□□□ -1.07
AL359538.1-201ENST00000453498 ATP6V1AP38606 617 aa8.37□□□□□ -1.07
AL359538.1-201ENST00000453498 SCUBE3Q8IX30 993 aa8.37□□□□□ -1.07
AL359538.1-201ENST00000453498 TMUB1Q9BVT8 246 aa8.37□□□□□ -1.07
AL359538.1-201ENST00000453498 IRX2Q9BZI1 471 aaPredicted RBP8.37□□□□□ -1.07
AL359538.1-201ENST00000453498 CENPBP07199 599 aaPredicted RBP8.37□□□□□ -1.07
AL359538.1-201ENST00000453498 CD46P15529 392 aa8.37□□□□□ -1.07
AL359538.1-201ENST00000453498 ADH1BP00325 375 aa8.36□□□□□ -1.07
AL359538.1-201ENST00000453498 GRIPAP1Q4V328 841 aa8.36□□□□□ -1.07
AL359538.1-201ENST00000453498 SYNJ1O43426 1573 aa8.36□□□□□ -1.07
AL359538.1-201ENST00000453498 LOC105371045A0A1W2PR82 267 aa8.35□□□□□ -1.07
AL359538.1-201ENST00000453498 MORN1Q5T089 497 aa8.35□□□□□ -1.07
AL359538.1-201ENST00000453498 PPARGC1BQ86YN6 1023 aaKnown RBP8.35□□□□□ -1.07
AL359538.1-201ENST00000453498 BAZ1BQ9UIG0 1483 aaKnown RBP8.35□□□□□ -1.07
AL359538.1-201ENST00000453498 TTLL12Q14166 644 aaPredicted RBP8.34□□□□□ -1.07
AL359538.1-201ENST00000453498 PRKD2Q9BZL6 878 aa8.34□□□□□ -1.07
AL359538.1-201ENST00000453498 S1PR4O95977 384 aa8.34□□□□□ -1.07
AL359538.1-201ENST00000453498 BCANQ96GW7 911 aa8.34□□□□□ -1.07
AL359538.1-201ENST00000453498 SPSB2Q99619 263 aa8.34□□□□□ -1.07
AL359538.1-201ENST00000453498 FAM217BQ9NTX9 383 aaPredicted RBP8.34□□□□□ -1.07
AL359538.1-201ENST00000453498 RNF223E7ERA6 249 aa8.33□□□□□ -1.08
AL359538.1-201ENST00000453498 KDM4AO75164 1064 aa8.33□□□□□ -1.08
AL359538.1-201ENST00000453498 SLC27A5Q9Y2P5 690 aa8.33□□□□□ -1.08
AL359538.1-201ENST00000453498 DIP2BQ9P265 1576 aa8.33□□□□□ -1.08
AL359538.1-201ENST00000453498 SLC6A16Q9GZN6 736 aa8.32□□□□□ -1.08
AL359538.1-201ENST00000453498 V9GY48 417 aaPredicted RBP8.32□□□□□ -1.08
AL359538.1-201ENST00000453498 CLSPNQ9HAW4 1339 aa8.32□□□□□ -1.08
AL359538.1-201ENST00000453498 WIZO95785 1651 aa8.32□□□□□ -1.08
AL359538.1-201ENST00000453498 WRNQ14191 1432 aaPredicted RBP eCLIP8.32□□□□□ -1.08
AL359538.1-201ENST00000453498 FANCD2Q9BXW9 1451 aa8.32□□□□□ -1.08
AL359538.1-201ENST00000453498 LTBP4Q8N2S1 1624 aa8.32□□□□□ -1.08
AL359538.1-201ENST00000453498 AMHR2Q16671 573 aa8.32□□□□□ -1.08
AL359538.1-201ENST00000453498 EEA1Q15075 1411 aa8.31□□□□□ -1.08
AL359538.1-201ENST00000453498 EIF4G3O43432 1585 aaKnown RBP8.31□□□□□ -1.08
AL359538.1-201ENST00000453498 FMNL1O95466 1100 aaPredicted RBP8.31□□□□□ -1.08
AL359538.1-201ENST00000453498 USP46P62068 366 aa8.31□□□□□ -1.08
AL359538.1-201ENST00000453498 ANKLE1Q8NAG6 615 aa8.3□□□□□ -1.08
AL359538.1-201ENST00000453498 SALL2Q9Y467 1007 aaPredicted RBP8.3□□□□□ -1.08
AL359538.1-201ENST00000453498 URB2Q14146 1524 aaKnown RBP8.3□□□□□ -1.08
AL359538.1-201ENST00000453498 THAP11Q96EK4 314 aa8.29□□□□□ -1.08
AL359538.1-201ENST00000453498 REPIN1Q9BWE0 567 aaKnown RBP8.29□□□□□ -1.08
AL359538.1-201ENST00000453498 PEG3Q9GZU2 1588 aa8.29□□□□□ -1.08
AL359538.1-201ENST00000453498 Q3C1V9 767 aa8.29□□□□□ -1.08
AL359538.1-201ENST00000453498 GIGYF2Q6Y7W6 1299 aaKnown RBP8.29□□□□□ -1.08
AL359538.1-201ENST00000453498 AK7Q96M32 723 aa8.29□□□□□ -1.08
AL359538.1-201ENST00000453498 PTPRMP28827 1452 aa8.28□□□□□ -1.08
AL359538.1-201ENST00000453498 NUTM1Q86Y26 1132 aa8.28□□□□□ -1.08
AL359538.1-201ENST00000453498 MAPKBP1O60336 1514 aa8.27□□□□□ -1.08
AL359538.1-201ENST00000453498 ACIN1Q9UKV3 1341 aaKnown RBP8.27□□□□□ -1.09
AL359538.1-201ENST00000453498 PPEF1O14829 653 aaPredicted RBP8.27□□□□□ -1.09
AL359538.1-201ENST00000453498 HOXA2O43364 376 aa8.27□□□□□ -1.09
AL359538.1-201ENST00000453498 SSTR3P32745 418 aaPredicted RBP8.27□□□□□ -1.09
AL359538.1-201ENST00000453498 RNF19BQ6ZMZ0 732 aa8.27□□□□□ -1.09
AL359538.1-201ENST00000453498 BRICD5Q6PL45 260 aa8.26□□□□□ -1.09
AL359538.1-201ENST00000453498 TRIM66O15016 1216 aa8.26□□□□□ -1.09
AL359538.1-201ENST00000453498 SLC19A1P41440 591 aa8.26□□□□□ -1.09
AL359538.1-201ENST00000453498 PARP9Q8IXQ6 854 aa8.25□□□□□ -1.09
AL359538.1-201ENST00000453498 TOP2AP11388 1531 aaKnown RBP8.24□□□□□ -1.09
AL359538.1-201ENST00000453498 LAPTM4AQ15012 233 aa8.24□□□□□ -1.09
AL359538.1-201ENST00000453498 MSS51Q4VC12 460 aa8.24□□□□□ -1.09
AL359538.1-201ENST00000453498 HLA-CQ95604 372 aa8.24□□□□□ -1.09
AL359538.1-201ENST00000453498 FAM160A2Q8N612 972 aaPredicted RBP8.23□□□□□ -1.09
AL359538.1-201ENST00000453498 PRDM9Q9NQV7 894 aa8.23□□□□□ -1.09
AL359538.1-201ENST00000453498 PTPRTO14522 1441 aa8.23□□□□□ -1.09
AL359538.1-201ENST00000453498 USB1Q9BQ65 265 aaKnown RBP8.23□□□□□ -1.09
AL359538.1-201ENST00000453498 SLC24A3Q9HC58 644 aa8.23□□□□□ -1.09
AL359538.1-201ENST00000453498 FCF1Q9Y324 198 aaKnown RBP8.23□□□□□ -1.09
AL359538.1-201ENST00000453498 GFRA3O60609 400 aa8.22□□□□□ -1.09
AL359538.1-201ENST00000453498 HSPA2P54652 639 aa8.22□□□□□ -1.09
AL359538.1-201ENST00000453498 TTBK1Q5TCY1 1321 aaPredicted RBP8.21□□□□□ -1.09
AL359538.1-201ENST00000453498 GUCA2AQ02747 115 aa8.21□□□□□ -1.09
AL359538.1-201ENST00000453498 EMID1Q96A84 441 aaPredicted RBP8.21□□□□□ -1.09
AL359538.1-201ENST00000453498 BEGAINQ9BUH8 593 aa8.21□□□□□ -1.09
AL359538.1-201ENST00000453498 CCDC88BA6NC98 1476 aa8.21□□□□□ -1.1
AL359538.1-201ENST00000453498 PLA2G2CQ5R387 149 aa8.2□□□□□ -1.1
AL359538.1-201ENST00000453498 SPRYD7Q5W111 196 aa8.2□□□□□ -1.1
AL359538.1-201ENST00000453498 Q6ZNB5 142 aa8.2□□□□□ -1.1
AL359538.1-201ENST00000453498 CHMP7Q8WUX9 453 aaPredicted RBP8.2□□□□□ -1.1
AL359538.1-201ENST00000453498 PDZRN3Q9UPQ7 1066 aa8.2□□□□□ -1.1
AL359538.1-201ENST00000453498 TSPOAP1O95153 1857 aa8.2□□□□□ -1.1
AL359538.1-201ENST00000453498 PDE4DQ08499 809 aa8.2□□□□□ -1.1
AL359538.1-201ENST00000453498 LIAT1Q6ZQX7 453 aa8.2□□□□□ -1.1
AL359538.1-201ENST00000453498 SPIRE2Q8WWL2 714 aa8.2□□□□□ -1.1
AL359538.1-201ENST00000453498 TNIKQ9UKE5 1360 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms