RNA–Protein interactions for RNA: ENST00000453466.1

PMPCB-205, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-205ENST00000453466 KNDC1Q76NI1 1749 aa28.53■■■□□ 2.16
PMPCB-205ENST00000453466 KIAA1210Q9ULL0 1709 aa28.51■■■□□ 2.15
PMPCB-205ENST00000453466 DLC1Q96QB1 1528 aa28.51■■■□□ 2.15
PMPCB-205ENST00000453466 SAFB2Q14151 953 aaKnown RBP eCLIP28.51■■■□□ 2.15
PMPCB-205ENST00000453466 NBPF8Q3BBV2 869 aa28.5■■■□□ 2.15
PMPCB-205ENST00000453466 HSPA1LP34931 641 aa28.48■■■□□ 2.15
PMPCB-205ENST00000453466 NALCNQ8IZF0 1738 aa28.46■■■□□ 2.15
PMPCB-205ENST00000453466 ROCK2O75116 1388 aaKnown RBP28.45■■■□□ 2.15
PMPCB-205ENST00000453466 MST1RQ04912 1400 aa28.45■■■□□ 2.14
PMPCB-205ENST00000453466 BRINP3Q76B58 766 aa28.42■■■□□ 2.14
PMPCB-205ENST00000453466 MINK1Q8N4C8 1332 aaPredicted RBP28.4■■■□□ 2.14
PMPCB-205ENST00000453466 C1orf167Q5SNV9 1468 aa28.39■■■□□ 2.14
PMPCB-205ENST00000453466 ROBO1Q9Y6N7 1651 aa28.39■■■□□ 2.14
PMPCB-205ENST00000453466 CDC42BPGQ6DT37 1551 aa28.39■■■□□ 2.13
PMPCB-205ENST00000453466 TRPM1Q7Z4N2 1603 aa28.38■■■□□ 2.13
PMPCB-205ENST00000453466 HIRIP3Q9BW71 556 aaPredicted RBP28.38■■■□□ 2.13
PMPCB-205ENST00000453466 NUTM2FA1L443 756 aa28.37■■■□□ 2.13
PMPCB-205ENST00000453466 CARD11Q9BXL7 1154 aa28.37■■■□□ 2.13
PMPCB-205ENST00000453466 GPRASP1Q5JY77 1395 aa28.35■■■□□ 2.13
PMPCB-205ENST00000453466 ORAI2Q96SN7 254 aa28.35■■■□□ 2.13
PMPCB-205ENST00000453466 CENPJQ9HC77 1338 aaPredicted RBP28.34■■■□□ 2.13
PMPCB-205ENST00000453466 ESCO1Q5FWF5 840 aa28.34■■■□□ 2.13
PMPCB-205ENST00000453466 WASLO00401 505 aaPredicted RBP28.33■■■□□ 2.13
PMPCB-205ENST00000453466 RALGAPBQ86X10 1494 aa28.32■■■□□ 2.12
PMPCB-205ENST00000453466 ARHGEF28Q8N1W1 1705 aaKnown RBP28.32■■■□□ 2.12
PMPCB-205ENST00000453466 EIF3AQ14152 1382 aaKnown RBP28.3■■■□□ 2.12
PMPCB-205ENST00000453466 ADGRB2O60241 1585 aa28.26■■■□□ 2.12
PMPCB-205ENST00000453466 CDK19Q9BWU1 502 aa28.26■■■□□ 2.11
PMPCB-205ENST00000453466 FMN2Q9NZ56 1722 aa28.24■■■□□ 2.11
PMPCB-205ENST00000453466 ANKARQ7Z5J8 1434 aa28.24■■■□□ 2.11
PMPCB-205ENST00000453466 DDX17Q92841 729 aaKnown RBP28.23■■■□□ 2.11
PMPCB-205ENST00000453466 AHDC1Q5TGY3 1603 aaPredicted RBP28.22■■■□□ 2.11
PMPCB-205ENST00000453466 FOXO3O43524 673 aa28.22■■■□□ 2.11
PMPCB-205ENST00000453466 PHF8Q9UPP1 1060 aa28.22■■■□□ 2.11
PMPCB-205ENST00000453466 NPHP3Q7Z494 1330 aa28.21■■■□□ 2.11
PMPCB-205ENST00000453466 LRRC59Q96AG4 307 aaKnown RBP28.21■■■□□ 2.11
PMPCB-205ENST00000453466 PHLPP1O60346 1717 aa28.2■■■□□ 2.11
PMPCB-205ENST00000453466 NUDT16Q96DE0 195 aaKnown RBP28.19■■■□□ 2.1
PMPCB-205ENST00000453466 SRPK2P78362 688 aaKnown RBP28.18■■■□□ 2.1
PMPCB-205ENST00000453466 PRR36Q9H6K5 1346 aa28.18■■■□□ 2.1
PMPCB-205ENST00000453466 TULP4Q9NRJ4 1543 aa28.18■■■□□ 2.1
PMPCB-205ENST00000453466 EVC2Q86UK5 1308 aa28.17■■■□□ 2.1
PMPCB-205ENST00000453466 JCADQ9P266 1359 aa28.17■■■□□ 2.1
PMPCB-205ENST00000453466 SOS2Q07890 1332 aaPredicted RBP28.17■■■□□ 2.1
PMPCB-205ENST00000453466 PMFBP1Q8TBY8 1022 aa28.15■■■□□ 2.1
PMPCB-205ENST00000453466 COL16A1Q07092 1604 aaPredicted RBP28.14■■■□□ 2.1
PMPCB-205ENST00000453466 CCDC61Q9Y6R9 512 aa28.14■■■□□ 2.1
PMPCB-205ENST00000453466 NHSL1Q5SYE7 1610 aa28.14■■■□□ 2.09
PMPCB-205ENST00000453466 CABP2Q9NPB3 220 aa28.13■■■□□ 2.09
PMPCB-205ENST00000453466 QRICH2Q9H0J4 1663 aa28.13■■■□□ 2.09
PMPCB-205ENST00000453466 PSME1Q06323 249 aa28.13■■■□□ 2.09
PMPCB-205ENST00000453466 SBNO2Q9Y2G9 1366 aa28.12■■■□□ 2.09
PMPCB-205ENST00000453466 ST20-MTHFSA0A0A6YYL1 179 aa28.12■■■□□ 2.09
PMPCB-205ENST00000453466 SLC24A1O60721 1099 aa28.12■■■□□ 2.09
PMPCB-205ENST00000453466 XPCQ01831 940 aaPredicted RBP28.12■■■□□ 2.09
PMPCB-205ENST00000453466 KRT28Q7Z3Y7 464 aa28.12■■■□□ 2.09
PMPCB-205ENST00000453466 NGDNQ8NEJ9 315 aaKnown RBP28.1■■■□□ 2.09
PMPCB-205ENST00000453466 USP32Q8NFA0 1604 aa28.1■■■□□ 2.09
PMPCB-205ENST00000453466 KIF1AQ12756 1690 aa28.08■■■□□ 2.09
PMPCB-205ENST00000453466 ATP7BP35670 1465 aa28.08■■■□□ 2.09
PMPCB-205ENST00000453466 USP47Q96K76 1375 aa28.08■■■□□ 2.09
PMPCB-205ENST00000453466 RGPD8O14715 1765 aaPredicted RBP28.07■■■□□ 2.08
PMPCB-205ENST00000453466 SPATA31A6Q5VVP1 1343 aa28.06■■■□□ 2.08
PMPCB-205ENST00000453466 PLEKHG3A1L390 1219 aa28.06■■■□□ 2.08
PMPCB-205ENST00000453466 ZNF316A6NFI3 1004 aaPredicted RBP28.06■■■□□ 2.08
PMPCB-205ENST00000453466 PXDNQ92626 1479 aa28.05■■■□□ 2.08
PMPCB-205ENST00000453466 TESK2Q96S53 571 aa28.03■■■□□ 2.08
PMPCB-205ENST00000453466 PNPLA6Q8IY17 1366 aa28.02■■■□□ 2.08
PMPCB-205ENST00000453466 CABP1Q9NZU7 370 aa28.01■■■□□ 2.07
PMPCB-205ENST00000453466 ACEP12821 1306 aa28.01■■■□□ 2.07
PMPCB-205ENST00000453466 SPATA31A3Q5VYP0 1347 aa28.01■■■□□ 2.07
PMPCB-205ENST00000453466 PPIP5K1Q6PFW1 1433 aa28■■■□□ 2.07
PMPCB-205ENST00000453466 ATAD2Q6PL18 1390 aa27.99■■■□□ 2.07
PMPCB-205ENST00000453466 SBNO1A3KN83 1393 aa27.99■■■□□ 2.07
PMPCB-205ENST00000453466 NUTM2BA6NNL0 878 aaPredicted RBP27.98■■■□□ 2.07
PMPCB-205ENST00000453466 NUTM2EB1AL46 878 aaPredicted RBP27.98■■■□□ 2.07
PMPCB-205ENST00000453466 NUTM2AQ8IVF1 878 aaPredicted RBP27.98■■■□□ 2.07
PMPCB-205ENST00000453466 PUS7Q96PZ0 661 aaKnown RBP27.98■■■□□ 2.07
PMPCB-205ENST00000453466 ITSN1Q15811 1721 aa27.98■■■□□ 2.07
PMPCB-205ENST00000453466 POLR3AO14802 1390 aaPredicted RBP27.97■■■□□ 2.07
PMPCB-205ENST00000453466 EIF4G2P78344 907 aaKnown RBP eCLIP27.97■■■□□ 2.07
PMPCB-205ENST00000453466 TMF1P82094 1093 aa27.97■■■□□ 2.07
PMPCB-205ENST00000453466 LMOD2Q6P5Q4 547 aa27.97■■■□□ 2.07
PMPCB-205ENST00000453466 SHPRHQ149N8 1683 aa27.96■■■□□ 2.07
PMPCB-205ENST00000453466 DISP3Q9P2K9 1392 aa27.96■■■□□ 2.07
PMPCB-205ENST00000453466 PAK3O75914 559 aaPredicted RBP27.95■■■□□ 2.06
PMPCB-205ENST00000453466 MED1Q15648 1581 aaPredicted RBP27.95■■■□□ 2.06
PMPCB-205ENST00000453466 MEX3CQ5U5Q3 659 aaKnown RBP27.94■■■□□ 2.06
PMPCB-205ENST00000453466 PHF23Q9BUL5 403 aaPredicted RBP27.94■■■□□ 2.06
PMPCB-205ENST00000453466 TNS3Q68CZ2 1445 aa27.93■■■□□ 2.06
PMPCB-205ENST00000453466 TOPAZ1Q8N9V7 1692 aa27.92■■■□□ 2.06
PMPCB-205ENST00000453466 ARHGEF10O15013 1369 aa27.92■■■□□ 2.06
PMPCB-205ENST00000453466 CDCA8Q53HL2 280 aa27.92■■■□□ 2.06
PMPCB-205ENST00000453466 TMC1Q8TDI8 760 aa27.91■■■□□ 2.06
PMPCB-205ENST00000453466 ZNF692Q9BU19 519 aaPredicted RBP27.91■■■□□ 2.06
PMPCB-205ENST00000453466 HSPA5P11021 654 aaKnown RBP27.89■■■□□ 2.06
PMPCB-205ENST00000453466 BRD4O60885 1362 aaPredicted RBP27.86■■■□□ 2.05
PMPCB-205ENST00000453466 LRP6O75581 1613 aa27.86■■■□□ 2.05
PMPCB-205ENST00000453466 ADAMTS2O95450 1211 aa27.85■■■□□ 2.05
PMPCB-205ENST00000453466 HAP1P54257 671 aaPredicted RBP27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms